Citrus x clementina (clementine): CICLE_v10008533mg
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Entry
CICLE_v10008533mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03022
Basal transcription factors
cic03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CICLE_v10008533mg
09124 Replication and repair
03420 Nucleotide excision repair
CICLE_v10008533mg
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cic01001
]
CICLE_v10008533mg
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cic03021
]
CICLE_v10008533mg
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v10008533mg
03400 DNA repair and recombination proteins [BR:
cic03400
]
CICLE_v10008533mg
Enzymes [BR:
cic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
CICLE_v10008533mg
2.7.11.23 [RNA-polymerase]-subunit kinase
CICLE_v10008533mg
Protein kinases [BR:
cic01001
]
Serine/threonine kinases: CMGC group
CDK family
CICLE_v10008533mg
Transcription machinery [BR:
cic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CICLE_v10008533mg
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
CICLE_v10008533mg
DNA repair and recombination proteins [BR:
cic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CICLE_v10008533mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Haspin_kinase
Seadorna_VP7
Motif
Other DBs
NCBI-GeneID:
18053680
NCBI-ProteinID:
XP_006451685
UniProt:
V4UKZ3
LinkDB
All DBs
Position
Unknown
AA seq
397 aa
AA seq
DB search
MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR
EIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLETVIRNTNIFLSPADIKSYMQMT
LKGLAFCHKKWVLHRDMKPNNLLIGSHGQLKLADFGLARIFGSPDRRFTHQVFARWYRAP
ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGSSDIDQLGKIFAAFGTATPSQWPDLA
YLPDYVEYQYVAAPPLRSLFPSASDDALDLLSKMFTYDPKARITAQQALEHRYFSSAPLP
TEPNKLPRPATKRASKASDFNPQEGPTVLSPPRKTRRVMPDREGFEGNANRTDKIEEHAG
ETKNADGEIAGRNEQVPTSVDFSIFAARPPSRPTINR
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagtcgatttgtcgaagaaagtcgctgatagatacctgaaacgtgaggttctt
ggtgaaggtacatacggtgtcgtttacaaagccattgatactaagacaggacagactgtt
gctataaaaaaaattcgtcttgggaagcaaaaggagggggtgaattttacagcactaaga
gaaataaagctgctgaaagaacttaaaagtccacatataattgagttgattgatgcattc
cctcacaaggggaacttgcatcttgtttttgagtttatggagactgacctcgaaacggtt
attcgcaataccaatatatttctctcaccagctgacataaaatcatatatgcagatgacc
ttgaaaggacttgctttttgtcacaagaaatgggttttgcatagggatatgaaaccaaat
aacctgttgataggatcccatggacagcttaaacttgctgattttggtttagcacgtata
tttgggagtccggatcgtaggtttacgcaccaggtctttgctcgatggtacagagctcct
gagctattatttggtgccaagcagtatggtgctggtgtggatgtttgggctgcaggatgt
atatttgctgagcttctcaatcgtcggccatttctgcagggttcaagtgacattgatcaa
ttaggaaagatcttcgcagcatttgggactgccacaccatcgcaatggcctgatttagca
taccttcctgattatgtggaataccaatatgttgctgcaccccctttgcgttcattgttt
ccgtcagctagtgatgatgctctagatctgttatcaaagatgtttacatatgacccaaaa
gctagaattactgcacagcaggcattagagcacaggtacttctcttctgcaccactgcct
acggagccaaacaagcttcctagaccagcaactaagcgggcatctaaggcttcagatttt
aaccctcaggagggtcctactgtgctttcacctccaagaaagacaaggagagtgatgcca
gaccgtgaagggtttgaagggaatgctaatcgaactgataagattgaggagcatgctggt
gaaacaaagaatgcagatggtgagattgctggaaggaatgagcaagtgccaacgtcagta
gatttttcaatctttgctgcaagacctccaagtagacctacaattaacaggtaa
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