KEGG   Citrus x clementina (clementine): CICLE_v10008722mg
Entry
CICLE_v10008722mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K17908  autophagy-related protein 18
Organism
cic  Citrus x clementina (clementine)
Pathway
cic04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:cic00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    CICLE_v10008722mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cic04131]
    CICLE_v10008722mg
   03029 Mitochondrial biogenesis [BR:cic03029]
    CICLE_v10008722mg
Membrane trafficking [BR:cic04131]
 Autophagy
  Autophagosome formation proteins
   Atg18-Atg2 complex
    CICLE_v10008722mg
Mitochondrial biogenesis [BR:cic03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    CICLE_v10008722mg
SSDB
Motif
Pfam: PROPPIN Beta-prop_Vps41 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 BCAS3_WD40 Beta-prop_WDR90_POC16_2nd WD40 WD40_CDC20-Fz WD40_MABP1-WDR62_1st
Other DBs
NCBI-GeneID: 18055717
NCBI-ProteinID: XP_006453528
UniProt: V4U1R8
LinkDB
Position
Unknown
AA seq 364 aa
MSNQSSSYPVFFVSFNQDNSGFALSTKDGFKIFDSSTGRLCYERAVGAFGIVEMLHSSSL
LAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFLTSILAVRLNKKRLVIVLREKTYIYDA
NTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHSHCEIDAHRA
PLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQD
ILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGV
KSSAVVRKVDNISASSSSEFLAYRASISVITYNGYFVEYIFSINNCCESTWTLDREFNLL
TKRA
NT seq 1095 nt   +upstreamnt  +downstreamnt
atgtcaaatcagtcctcttcgtatccagttttcttcgtttctttcaatcaagacaacagt
ggatttgcgctgagcacgaaggacggttttaagatttttgattcgagtacaggcaggctg
tgttatgaacgagctgtgggagctttcggtattgttgaaatgctgcatagctctagtctt
ctggcaattgtgggagctggtgaacagccgtcattatccccacggagactttgtttgttt
aatactacaactggaactgctctccgagagttgaattttttgacctcaatcttggctgtt
cgcttaaataagaaaagacttgtcattgttttgcgagaaaagacatatatatatgatgct
aatactcttgcaattctggataccatcgatacggtgccaaacttgaaaggactttgtgca
ttttctcctagtttgaatgcctgcttcttggctgtacctgccagtacaaccaaaggatct
gttttggtgtacaatgtcatggagctccattcccactgtgagattgatgctcatcgggca
ccattggctgcaattgttctttcttccaatgggatgtacattgcaactgcatccgagcaa
ggaaccataatcagagtttttctggtttcagaagcaactaagtcatatagtttccgaaga
gggacatatccatcaacaatattttccttgtcatttggacaatcaatgcaatttcaggat
attcttgtagctactagttcatcgggttctcttcatgttttctccccgggttttgccata
aatcagaggagaggcggacggacaagtagtattcttggatcaatattgcctgagtcggtg
aatgaggtactggatccagctgatcatcatgtacttcgtaacgcttttccagcaggagtt
aaaagctctgcagtggttcgcaaggtggacaacatctctgcctcatcctcatctgaattc
ctagcttatagggcctctatatcagtaataacctacaatggatactttgttgaatatatc
ttcagcatcaacaactgttgtgagtccacgtggactttggatcgcgaattcaatctgttg
acaaaaagagcatga

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