KEGG   Citrus x clementina (clementine): CICLE_v10009263mg
Entry
CICLE_v10009263mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
cic  Citrus x clementina (clementine)
Pathway
cic03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cic00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CICLE_v10009263mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cic03041]
    CICLE_v10009263mg
   03400 DNA repair and recombination proteins [BR:cic03400]
    CICLE_v10009263mg
Spliceosome [BR:cic03041]
 Complex B
  Other components
   Prp19 complex
    CICLE_v10009263mg
 Complex C
   Prp19-CDC5 complex
    CICLE_v10009263mg
DNA repair and recombination proteins [BR:cic03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    CICLE_v10009263mg
SSDB
Motif
Pfam: BCAS2
Other DBs
NCBI-GeneID: 18056140
NCBI-ProteinID: XP_006451674
UniProt: V4WEE6
LinkDB
Position
Unknown
AA seq 218 aa
MASSSNNNGDILMLEAPPDAARPWNAEIIDALPYIDDDYADPRVKEEVDRMVEQEMRRSS
KKPSDFLKNLPPLSKFRFENHPMLAKEYERVRAGKPPAVLDTTRYQLEILPANKRNDESA
WKQALQKAQRLSQHQLIRLENLELMSKHGPEVWRQHNQRLEALLLGFVSILLQGVLFLIF
VIITLLFIFSFIYLNIFSSFFLFWGGGSVLGIQLRMLR
NT seq 657 nt   +upstreamnt  +downstreamnt
atggcgagcagtagcaataataacggcgacattctgatgctggaggctccaccggatgcg
gccaggccatggaacgctgaaatcatcgacgcgttgccgtacatcgacgacgactatgcc
gaccctagagtcaaggaagaggttgaccgtatggtcgagcaagagatgcgtcgtagctcc
aagaagccctccgattttctgaaaaatcttccccctctctccaagttcagattcgagaat
catccaatgcttgcgaaagagtatgagcgtgtgagagccgggaagcctcctgcggtgctt
gatactacacggtatcaattggaaattctgccggcgaataaaagaaatgatgaatctgct
tggaagcaggcacttcagaaagctcagcgcttatcgcagcatcaattgatcaggctggaa
aatttggagttgatgtctaaacatggtcctgaagtctggaggcagcacaatcaacgattg
gaagcattactattggggtttgtatcaatcttattacagggagttctttttcttattttt
gttattattacactactattcattttttcttttatttatttaaatattttttcctctttt
tttttgttttggggggggggaagtgtactggggattcagctacgaatgctgcgttaa

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