Citrus x clementina (clementine): CICLE_v10010384mg
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Entry
CICLE_v10010384mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cic03009
]
CICLE_v10010384mg
Enzymes [BR:
cic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CICLE_v10010384mg
Ribosome biogenesis [BR:
cic03009
]
Eukaryotic type
90S particles
Helicases
CICLE_v10010384mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
18054918
NCBI-ProteinID:
XP_006452318
UniProt:
V4TY82
LinkDB
All DBs
Position
Unknown
AA seq
748 aa
AA seq
DB search
MKKSKRKPNRKAVRSMEIEEIELLNSWIDSQKPESGTNPLSFPPLGKKEPIGRIGEDSFS
KYVGSTRFDQLPISKKTKSGLKDAGFVKMTDIQRASLPHSLCGRDILGAAKTGSGKTLAF
VIPVLEKLYKERWGPEDGVGSIIISPTRELADQLFDVLKAVGKHHNFSAGLLIGGRRDVD
MEKEHVNELNILVCTPGRLLQHMDETPNFDCSQLQILILDEADRILDVGFKKALNAIVSQ
LPKHRQTFLFSATQTKSVQDLARLSLKDPQYLSVHEESVTATPNRLQQTAMIVPLEQKLD
MLWSFIKAHLNSKILVFLTSCKQVKYVFEAFKKLRPGIPLMCLYGRMKQDRRMAIYAQFC
EKRSVLFCTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYNSGGRSVLFLTPA
EMKMLEKLREAKIPIHFTKANTKRLQPVSGLLAALLVKYPDMQHRAQKAFITYLRSVHIQ
KDKEVFDVTKLSIDEFSASLGLPMTPKIRFLNQKKGKMVPVKPVLDNAEKEDKLMISREK
LLPDNFTEENVDRDILETKDIEDEGKADLLEDVMRATRVKKNKKLKINVHRPLGTRLVFD
EECNTVPPLAMLADTKNANVSLDQDQKTEYYKKIREELKRADKEDKLLDRQRRREKRIKQ
KMKRKRGGLGDDDDEEDEDNASDKDEESMERGRRKKSKIYFDSDSDNDNDERKQNKDDNG
PNIDSISLAEQEALALKLLNSMHSYVNT
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatcaaagcgaaaaccgaaccgcaaggcagttcgttcgatggaaatcgaagaa
atcgagctactaaactcatggatcgactcacaaaagccggagtcgggcacgaatccgctg
tcgtttccgccactcggtaaaaaggaacccattggacgaatcggggaagatagcttctcc
aagtatgtggggtcgacgaggtttgatcagttgcccatatcgaagaagacgaagagcggg
ttaaaagatgctggctttgttaagatgactgatatacagagagcttctttgccgcattcg
ttgtgcgggagagatattttgggcgccgccaaaactgggtctggaaagactttagctttt
gttattcctgttttggagaagttgtataaggagagatgggggcctgaggatggtgtgggc
agcattataatatctcccactagggaattagcggatcaactttttgatgtattgaaagct
gttggcaagcaccataattttagtgctggcctcttaattggtggtagaagggatgttgat
atggagaaggagcatgtgaatgagctgaacatattggtctgcacccctggtaggcttctt
cagcacatggatgagactccaaattttgattgttcacaacttcagattttgatccttgac
gaggcagatcgtattcttgatgttggatttaagaaggctttaaatgcaattgtctcacag
ctcccaaaacatagacaaacctttcttttctctgcaactcaaacgaagtctgttcaggat
cttgcaagactgagtttgaaggaccctcagtatctgagtgtgcatgaggagtctgtgaca
gctactcccaatcgtttgcagcagactgcaatgattgtccctcttgaacaaaagttagac
atgttgtggagcttcataaaggcgcatcttaattcaaagattctagtttttctaacaagc
tgcaaacaggtaaaatatgtctttgaagcatttaagaagttgcgccctggtatacccttg
atgtgtctttatggtaggatgaagcaggatagaagaatggccatatatgctcagttttgt
gagaagcgttcagttctcttttgcactgatgtggcctcaagaggtcttgattttaataag
gcagttgactgggttgtccaggtcgattgcccagaagatgttgcatcctacatacatcga
gttgggcgcacagctcgctataatagtggagggaggtctgtcttatttttgacgcctgca
gaaatgaaaatgcttgagaagttgcgggaagcgaaaatacccatacattttactaaggca
aacaccaaaagactgcaacctgtttctggattgttagcggctttacttgtcaaatatcca
gatatgcagcatcgagctcaaaaggcctttattacatatttgcgctctgttcatattcaa
aaggataaagaggtttttgatgtgacgaagctgtccattgatgaattctcggcatcactg
ggtctgcctatgaccccgaaaatcagatttctgaaccaaaagaagggcaaaatggtgcct
gtaaaacctgttcttgacaatgctgaaaaggaggataaattgatgatttcaagagagaag
ctacttccagataatttcactgaagagaatgtggacagagacattcttgaaacaaaggat
atagaagatgagggcaaagctgacctgttggaagatgttatgcgagcaaccagagttaaa
aagaataagaaattgaagattaatgttcatagacctttggggacgaggttagtctttgat
gaggaatgcaacacagtacctccacttgcaatgctggctgacacaaagaatgccaatgtt
tcacttgatcaagaccaaaaaactgaatactacaagaagattagagaagagttgaagcgt
gcagacaaagaagacaagcttctcgatcgtcagcgtcgtagggagaaacgaatcaagcag
aagatgaagcggaagagaggtggcttgggagatgatgatgacgaagaagatgaggataac
gcttctgataaagatgaagaatcaatggagcggggaagacgtaaaaagtcgaaaatatac
tttgacagtgacagtgacaacgacaacgatgagagaaaacagaacaaggatgacaatggt
cccaacatcgattctatttctctggcggaacaagaagcactggctcttaagttgttgaat
tcaatgcactcttacgttaatacatag
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