Citrus x clementina (clementine): CICLE_v10010598mg
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Entry
CICLE_v10010598mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K05387
glutamate receptor, ionotropic, plant
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cic04040
]
CICLE_v10010598mg
Ion channels [BR:
cic04040
]
Ligand-gated channels
Glutamate (ionotropic)
CICLE_v10010598mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Peripla_BP_6
SBP_bac_3
Lig_chan-Glu_bd
M_Eco57I_C
Motif
Other DBs
NCBI-GeneID:
18053954
NCBI-ProteinID:
XP_006450212
UniProt:
V4UBN3
LinkDB
All DBs
Position
Unknown
AA seq
957 aa
AA seq
DB search
MSQNTTVPVNVGLVLDINGEVGKVALSCINMSLADFYNSNSHYKTRLILNTRDSKRDVVA
AAAAALDLLKNVQVQAMLGPENSMQTNFIIQLGNKSQVPILSFSATSPSLTSIRSPYFFR
GALNDSSQVGAITAIIKAFGWREAVPVYVDNQYGEELIPSLTDALQAIDTRVPYRSVISP
LATDDQIEKELYKLLTIQTRVFILHMLPSLGSRIFQKANEIGLMNKGCVWIMTDGMTNLL
RTLEPSVTDSMQGVIGVRPYVPKTKALENFRVRWKRKFLQENPSLFDAELNIFGLLAYDA
TSALAVAVEKAGITGFGFDKTNVSSNATDLEAFGISQNGPKLLQALSSIRFRGLTGDYIF
VDGQLQSSAFEIINVNNGARGVGFWSPEKGLTQKLSSNSTTKSKLRPIIWPGDSTSDPKG
WEIPTNEKKLRVGVPVKKGFSDFVKVTIDPKTQETSVVGYSIDVFKAVIEELPYAVAYDF
VPYAQPDGTSSGSYNDLIYQVFLGEFDAVVGDTTIVFNRSNYVDFTLPYTESGVSMIVPI
KDSKKRNAWVFLQPLTWDLWVTSGCFFIFIGFVVWVLEHRVNEDFRGPARHQVGTSFWFS
FSTMVFSQRERVISNLARFVVIVWCFVVLILIQSYTASLTSLLTVDQLQPTITDVNLLIK
RGDNVGYQKGSFVLGILKQLGFDERKLVVYNSHEECDELFQKGSANGGIAAAFDEIPYAK
LLIGQHCSKYTMVEPTFKTAGFGFAFPLHSPLVHDVSKAILNVTEGDKMKEIEDAWFKKH
SSCPDAGTVVSARSLGLNSFWGLFLIAGIAAILALIIFLAVFVHEHWNVLKNSESSLLSR
IRIFLRIFVSRDLSAHTFKEKGGIQVHGMGPTEASPDSRYPASPSSYSQHADSHFLFYGE
QGTPRTESAYKLTGTCMSCRVTVLCQLALHVINSHLLTAAARILRSAIHVAEDFDAD
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagaacacaacagttccagttaatgtggggttggttcttgacataaatggagaa
gttgggaaggtagctttgagttgcatcaacatgagccttgcggatttttataactccaat
tctcactacaaaactaggcttattcttaacaccagggattccaaaagagatgttgttgct
gctgctgctgcagctctggacttgcttaaaaatgtacaagtacaggccatgctgggacct
gaaaattccatgcagaccaactttataattcaactaggcaacaaatcacaagtgcccatt
ttgtcattttccgcaacaagtccttcgcttacttccattaggagtccatacttctttaga
ggtgccctaaatgactcatctcaagttggtgccataactgcaataatcaaagccttcggt
tggagagaagctgtgcccgtttatgtagacaatcaatacggagaagaattgattccttct
ctaactgacgcccttcaagccattgacactcgggtgccatatagaagcgtcatttcccct
ttggctactgacgaccaaattgaaaaagagctttacaaactattgacaatacaaaccaga
gtgttcattttgcatatgctgccttcccttggctctaggatttttcagaaagcaaacgaa
attggtttgatgaataaaggctgtgtgtggatcatgaccgatggcatgaccaatttgtta
agaacattggagccttcagtgactgattcaatgcaaggagtgataggtgtgagaccctat
gttcctaaaacaaaggcactcgaaaactttagagttcgatggaaaaggaaatttttgcag
gagaatccgtctctttttgatgctgaattgaacatttttgggttattagcttatgatgct
acaagtgcactggccgtggcagttgagaaagccggtatcacaggttttggctttgacaag
actaatgtttctagcaatgcaactgatcttgaagcttttgggatctctcaaaatggtcca
aagcttctccaagctttatccagtataagattcagagggcttacgggggactacattttt
gttgatggacagttacaatcttcagcttttgagattattaatgtcaataatggagcaaga
ggggttggattttggtcaccagaaaaaggactaacgcagaaactgagttcaaattcgact
acaaaatccaaacttagacccatcatatggccaggggattctacttctgatcccaaggga
tgggagattcctacgaatgagaagaagctacgggttggagtgcccgtaaagaaaggcttt
agtgattttgtgaaggtgacaattgatccaaaaactcaagaaacttctgtcgttggatat
tctatagatgtgtttaaagctgtaattgaggaattgccatatgctgtcgcttatgatttt
gtcccctatgcacagcctgatggcaccagttccggttcatacaatgatttgatctaccaa
gtatttctcggggaatttgatgctgtggtgggagatacaacaattgtgtttaatagatca
aattatgtcgatttcacactgccttatacagaatctggagtatccatgattgtgccgatc
aaagatagcaagaagagaaatgcatgggtgttcctgcagccattaacatgggacctttgg
gtgacaagtggctgttttttcattttcattggatttgtagtgtgggttcttgaacacaga
gtaaacgaagattttcgtggccctgctaggcatcaagttggcacaagcttctggttctca
ttctcaacaatggtcttttcacaacgggagagagtgataagcaacttggccagatttgtg
gtgattgtatggtgttttgttgtgctcattctcattcaaagctacacagctagcttgact
tcgctacttacagtggaccaactgcagccaacaattactgatgtcaacttgctgataaag
agaggggacaatgttggctaccagaagggttcctttgttcttggaatcctgaaacaatta
ggctttgatgagaggaaacttgtagtgtataattctcatgaagaatgcgatgaacttttc
caaaaaggcagtgcaaatggcggcattgcagcagcatttgatgaaattccctacgcgaag
ttgcttattggacaacattgctccaaatataccatggttgaaccaacattcaaaacagct
gggtttggttttgccttcccattacattcccctctagtacatgatgtttcgaaggcaatc
ttaaatgtgactgaaggggataaaatgaaagaaattgaagatgcatggttcaagaaacat
tctagctgcccagatgccggtacagttgtttctgctcgtagccttggccttaacagtttc
tggggtctgtttctcatagctggcattgctgcaatcttagctctcatcatattcctggct
gtttttgtccatgagcactggaatgtcttgaagaattcagaatcatcattgttgtcaaga
attcgcatttttcttagaatatttgtttcaagagacctcagtgcacatactttcaaagag
aaaggtggcatccaagttcatggtatgggtccaactgaagcctctccagacagtcgctac
ccagccagtccttcaagctactcacagcatgcagattcccactttttgttctatggagag
caaggaacgcccagaactgagtctgcttataaactaactggtacatgcatgagctgccgt
gtaaccgtcttatgccagctggcactccatgtcatcaattcgcatctgttgactgcagct
gctagaatactccgctctgctatccacgttgctgaagattttgacgctgactag
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