KEGG   Citrus x clementina (clementine): CICLE_v10010841mg
Entry
CICLE_v10010841mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
cic  Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:cic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cic03041]
    CICLE_v10010841mg
Spliceosome [BR:cic03041]
 Complex B
  Other components
   Complex B specific factors
    CICLE_v10010841mg
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_EML ANAPC4_WD40 NBCH_WD40 LisH_TPL WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_DCAF4 Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_NWD2_C Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_Nup120_160 Ge1_WD40 Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_WDR19_1st DUF7165 Beta-prop_NUP159_NUP214 Beta-prop_WDR35_TULP_N Beta-prop_VPS8 Beta-prop_WDR75_2nd Beta-prop_HPS5 Beta-prop_LRRK2 PROPPIN VPS8_N zf_topless PD40 Beta-prop_IP5PC_F RMC1_N
Other DBs
NCBI-GeneID: 18055751
NCBI-ProteinID: XP_006453042
UniProt: V4UJG3
LinkDB
Position
Unknown
AA seq 512 aa
MTLEIEARDVIKIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIETFVADINSGRWDAIL
PQVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHL
LVRTYFDAHEAYQDSTKERRRAQIAQAIAAEVSVVPPSRLMALIGQALKWQQHQGLLPPG
TQFDLFRGTAAMKQDVEDMYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSFDGFIEVW
DYLSGKLKKDLQYQADETFMMHDETVLCIEFSRDSEMLASGSQDGKIKVWRIRSGQCLRR
LERAHSEGVTSLVFSRDGSQILSTSFDSTARIHGLKSGKLLKEFRGHSSYVNDAIFTNDG
SRVVTASSDCTVKVWDLKSTDCLQTFKPPPPLRGGDASVNSVHLFPKNPDHIVVCNKTSS
IYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDRNLYCFSHQSGKLEHLMK
VHEKDVIGVTHHPHRNLLATYGEDCTMKLWKP
NT seq 1539 nt   +upstreamnt  +downstreamnt
atgacattagaaatcgaagctcgagatgtgatcaagattgtgcttcaattctgcaaagag
aattctttgcagcaaacgtttcaaacgcttcagaacgagtgccaagtgtcgctgaatacc
gtggatagcattgagacatttgttgccgatatcaatagtggaagatgggatgcaattttg
cctcaagttgctcagcttaaacttccaagaaataaattggaggacttgtatgagcagatt
gtattggagatgattgaactgcgtgagctggatactgcacgtgcgattctgaggcaaact
caggcaatgggtgtaatgaagcaggaacaacccgaaagatatttgcggcttgagcatctt
cttgttagaacttactttgacgcacatgaggcttatcaagattccaccaaagagagacgt
cgtgctcaaattgcccaagctattgctgcggaagtttctgtggttccaccatcacggtta
atggctctgattggtcaggccctgaagtggcagcagcaccaagggttactacctccagga
acacagtttgacttgtttcgaggaactgctgctatgaaacaggatgtagaagacatgtat
ccaacaactctttcccacaccattaagtttgggacaaaaagtcatgcggaatgtgctcgg
ttctctccagatggccagtttcttgtctcttgctcttttgatggatttattgaggtctgg
gattatttaagtgggaaactcaagaaggatctacaataccaggctgatgaaactttcatg
atgcatgatgaaactgtcctctgtattgagtttagcagagactcagagatgcttgcctct
gggtcgcaagatgggaagatcaaagtttggcgcataagaagcggtcaatgtttgcgccgt
cttgaacgagcacattcagaaggtgttactagtcttgttttctctcgagatggaagccaa
attctaagtacatcttttgacagcacagcaagaattcatggactaaaatctgggaaattg
ttgaaagagttccgaggtcattcatcttacgtaaatgatgccatattcacaaatgatggc
agccgtgtcgttactgcctcaagtgattgtacagtaaaggtctgggacctgaagagtact
gattgcctccagacatttaagccaccacctcctttgaggggaggtgatgcttcagtgaac
tctgtccatttattcccaaagaatcccgatcacatagtcgtatgtaataagacatcctca
atatacataatgactcttcaaggacaggttgtgaagagtttttcttctggtaaaagagaa
ggtggagattttgttgctgcttgtgtttcaccgaaaggtgaatggatctattgtgttggt
gaagacaggaacttgtactgcttcagccatcagtctggtaaactagagcatctaatgaag
gtccatgaaaaggatgtaattggtgtgactcatcatccccatagaaaccttctggcaaca
tatggtgaagattgcacaatgaaattatggaagccttga

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