Citrus x clementina (clementine): CICLE_v10010894mg
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Entry
CICLE_v10010894mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K06672
cohesin loading factor subunit SCC2
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cic03036
]
CICLE_v10010894mg
Chromosome and associated proteins [BR:
cic03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
CICLE_v10010894mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
PHD
PHD_2
Cnd1
COP9_hel_rpt
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
18039730
NCBI-ProteinID:
XP_006431278
UniProt:
V4SAE9
LinkDB
All DBs
Position
Unknown
AA seq
1822 aa
AA seq
DB search
MSSFPSASTSGSGSGLGSTGQWGIGFSNTIHSEVAPCLPLPSLPVFCGATDPNLRLFDEA
SAGVSYRLLNRTEILTQSSRIADLLRVTDVSYLNLRDEAKPDPYSDMEPLELHNQVLQYN
AEAFEYVTPGHIKEQVSGGESFERKDREPSILGASGLQRDYIGAQNPHLDRILTNDVSTS
SSRKPKIKKKGGDNISSSAQPDPIEVQDATIMNFCEMLEDFCGRAEIPTDDQNDTELLSL
PVADVRIVVNEIMSLRAKKLLHLVSVDILVRLLRVLDHQIHRAEGLSVDEREHLDSDRVS
MVFCALESIHAALAVMAHDHMPKQLYKEEIIERVLEFSRHQITDVMSAYDPSYRALHKTS
ESAALEVDEDEEVDADLGSASKRRRTMKNVKVKRSAFNRVSGAVNSILQKLCTILGLLKD
LLLIERLSDSCILQLVKTSFTTFLVDNVQLLQLKAIGLLSAIFYSYTQHRTYVIDEILLL
LWKLPSTKRALRTYHLPDEEQRQIQMVTALLIQLVHSSANLPEALRKATSGSTILEVQID
SSYPTKCHEAATDTCCLFWTRVLQRFTSVKAQDASELKVMMENLVMDLLTTLNLPEYPAS
APILEVLCVLLLQNAGPKSKDVSARSMAIDLLGTIAARLKQEAVLCGRERFWMLQELVRE
DSSDQSYPKDLCCVCLDGRVEKRVFMCQGCQRLFHADCLGVREHEVPNRGWNCQLCLCRN
QLLVLQSYCKSHCKGDINKSHSRSESNPETSDTITKLEIVQQMLLNYLQDAVSADEMNLF
VRWFYVCLWYKDDPEAQQKSMYYLARLKSKEIVRESGTISLSLTRDTVKKITLALGQNNS
FSRGFDKILHLLLVSLRENSPIIRAKALRAVSIIVEVDPEVLCDKRVQLAVEGRFCDSAI
SVREAALELVGRHIASHPDVGLQYFVKVAERIKDTGVSVRKRAIKIIRDMCTSNTNFTES
TTACIEIISRVNDDESSIQDLVCKTFYEFWFEEPSGLQTQYFGDGSSVLLEVAKKTEQIV
EMSRGLPNHQLLVTVIKRNLALDFFPQSAKAAGINPMSLASVRRRCELMCKCLLERILQV
EEMNNEGMEMRTLPYVLVLHAFCVVDPTLCAPVSDPSQFVITLQPYLKSQVDNRVVAKFL
ESVIFIIDAVLPLVRKLPSSVIEELEQDLKHMIVRHSFLTVVHACIKCLCSVSKISGKGL
STVEHLILVFFKYLDSHNPDSKQFQQVGRSLFCLGLLIRYGSSLLTTSYEKNIDIVSNLN
LFKRYLRMEDFSVKVRSLQALGFVLIARPEHMLEKDIGKILEATLADSSHIRLKMQALQN
LYEYLLDAENQMETDKGSGNEVEYTVEDGHSVPVAAGAGDTNICGGIIQLYWDKILGRCL
DANEEVRQTALKIVEVVLRQGLVHPITCVPYLIALETDPQEVNSKLAHHLLMNMNEKYPA
FFESRLGDGLQMSFVFIQSIGGGSSECRNQKFQSKAAGTMKGKSDGSSLTQARLGVSQIY
KLIRGSRNSRNKFMSSIVRKFDNPSCSDLVIPFLMYCTEVLALLPFSSPDEPLYLIYTIN
RVIQVRAGALEANMKAMNTHMLQRDAQKTTYENGMVDQESAEPVFNHMTSMDLNGTIKEE
PAAQPIFYHMSSIDLNGTVQPEPNDQPLLHRMPPLEAKVHVMSSGEPRDIPKDDLQKVQV
DCISATALQLLLKLKRYLKIVYGLNDARCQAYSPSEPQKPGEPLTKQNIPFDISDTRVAL
PSTYEDLMQKYQEFKNALKEDTVDYAVYTANIKRKRPAPRKGVRYGRIIGGDDDEDYSDE
EWGGGARKLSNSGRKSYSCRRR
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcttcccgagcgcttcgacttctggctcgggctcgggcctaggctcgaccggc
cagtgggggatcggcttttcgaacacgatacactcggaagtagctccgtgcttgccgttg
ccttcgcttccagtgttctgcggcgctacggatccgaacctgcggttgttcgatgaagct
agcgctggtgtcagttataggttgttgaatcgtactgagattctcactcagtcgagtcga
attgctgatctacttcgtgtaaccgatgtttcgtacttgaatcttagagatgaggcaaag
ccagatccctatagcgatatggagcctttagaacttcacaaccaagttctccaatataat
gcggaagcttttgagtatgtcactcctggtcatattaaggagcaagtttctggcggtgaa
tcatttgaaaggaaagaccgtgagccaagtatacttggcgctagtggtttgcagagagat
tatattggagctcagaatccccacctcgaccgtatccttacaaatgatgtatccacttca
tcatcccggaaacccaaaatcaagaagaaaggtggggataacatctcttcctcagctcag
cctgatcctattgaggttcaagatgctaccattatgaacttctgtgagatgttggaggat
ttttgtggcagagctgaaattcctactgatgatcagaatgacacagagttgttgtcttta
cctgttgctgatgtgaggattgttgtgaatgaaataatgtcattacgtgcaaagaaactt
ctacatttagtctcagtagatattctggtgagactattgcgggttctagatcatcaaata
catcgagcagaaggtttatcggttgatgaacgtgagcatctagattcagatagagtttcc
atggtcttttgtgcccttgaatcgattcatgcagctctagctgtaatggctcatgaccac
atgccaaagcagctttataaggaagagatcattgaaagggttttggagttctcgaggcat
caaataacagatgttatgtcagcttatgatccgtcatatcgtgctctgcataaaactagt
gaaagtgcagcacttgaggttgatgaagatgaagaggtggatgctgacttaggttcagct
agcaagagacggcggacaatgaagaatgtcaaagtgaagagatctgcatttaatagggtt
tctggtgctgtgaattcgatacttcagaagctctgtacaattcttggtttgctcaaggat
ttgttgttaattgagagattatctgatagttgcattctgcagctggtgaagacaagcttt
acgacatttttggtggataatgtccagctcttgcaattgaaggctatcggtttactaagc
gcgatattctattcatacacccagcatcgcacttatgtaatagatgaaatacttctgctt
ctttggaagctgccatccacgaaaagagcattgagaacttatcacctacctgatgaagaa
cagaggcagattcagatggtcactgctttgctaattcagttggttcatagtagcgcaaac
ctccctgaagctttgaggaaagcaacaagtggtagtaccatattagaagtccagattgat
tctagttacccaactaaatgccatgaagcagcaacagatacatgctgtttgttctggacc
cgcgttcttcagcgctttacaagtgtaaaggctcaggatgcttctgagctgaaagttatg
atggagaatcttgtcatggatttactgacaactttgaatttaccggaatatccagcatct
gctcctattctggaggttctctgtgtcttacttctacagaatgctgggccaaaatctaaa
gacgtctcagcacgttcaatggccattgaccttcttggtacaattgctgccaggttgaag
caggaagctgtcctctgcggccgggagagattctggatgttacaagaactggtcagagag
gatagttctgatcagagttaccctaaagatctatgttgtgtttgcttagatggaagagtt
gagaaaagggtgtttatgtgtcaaggttgtcaaagattgttccatgctgattgtttgggt
gtaagggaacatgaagtgccaaatcgtggctggaattgtcaactttgtctctgcaggaac
caacttcttgtactacaatcatactgcaagtcacattgcaagggtgacattaataagagc
cacagtcggtcagaaagcaatcccgaaacttctgatacaattacaaaacttgaaattgtt
caacagatgctcttgaattaccttcaagatgctgtttctgcggacgaaatgaatctcttt
gtgcgatggttttatgtgtgcctatggtacaaggatgatccggaagctcaacaaaagtcc
atgtactaccttgctagactgaaatcaaaagaaatagtgcgtgaatctgggactatttca
ttgtctttgactagagacacagttaaaaagatcactctagcactgggacaaaataattct
ttctctagagggtttgataagatccttcatctgcttctggttagtttaagggagaactct
cctataatcagggctaaggctttacgagcggttagtataatcgtcgaagttgatcctgag
gtgttgtgtgacaaacgtgtacagttggctgttgaaggaaggttttgtgactcagcaata
tctgtaagagaagcagcattggagcttgttggccggcatattgcttcacatcctgatgtt
ggtttgcagtattttgtgaaagtagcagagaggataaaagatacgggagtaagtgtgcgg
aaaagggcaatcaaaatcatccgagatatgtgcacatcaaacactaacttcactgaatct
acaactgcttgcatcgagatcatatctcgtgttaatgatgatgaatccagtatacaggat
cttgtctgcaagaccttttatgagttctggtttgaggaaccttctggattgcagactcaa
tattttggagatggtagttctgttctgttggaggtggctaagaagactgagcagattgtt
gaaatgtcaagggggttgccaaatcatcagcttctggtcactgtcattaagcgcaactta
gctcttgattttttccctcagtcagctaaagctgctgggatcaaccctatgtcacttgca
tcagtacgtcgacgttgtgaactaatgtgcaagtgcttattggaacggatattgcaggta
gaggagatgaataatgagggaatggagatgcgtacccttccctatgtgctggtcttgcat
gcattttgtgtggtggatccaacactttgtgcacctgtttcagacccttcccagtttgtc
atcactctgcagccatatctcaagagtcaggttgataatcgagtggttgcaaaatttcta
gagagtgtaatttttataattgatgctgtgttgcccttggttcgaaagctaccttcgagt
gtcattgaagaactggaacaagacttgaagcacatgattgttcggcattcttttttgaca
gtggtccatgcttgcatcaagtgtctgtgctctgtgagtaaaatatcaggaaaagggtta
agcacagttgagcatcttattttggttttcttcaagtatttggatagccacaatcctgat
agcaagcagtttcagcaagtggggcggtctcttttctgtcttggattgcttatccgttat
gggagttctctgctgactacctcatatgagaaaaatattgatattgtcagcaatctcaat
cttttcaaaaggtatcttcgtatggaggattttagtgtaaaggttagatctttgcaggcc
ttaggctttgttttgattgctagaccagagcatatgttggaaaaggacattggcaagata
ttagaggcaacattggctgattcttctcatatccgacttaagatgcaagctttgcaaaat
ctgtatgaatatcttcttgatgcggaaaatcaaatggaaacagataaaggcagtggtaat
gaggttgaatacactgtagaagatggccacagtgtacctgttgctgccggtgcaggggat
acaaacatatgtggaggtataattcagttgtattgggataagatattgggaagatgcttg
gacgctaatgaggaagttcgccagactgcccttaagatagtggaagtagtgctccgtcaa
ggtcttgttcatcctattacttgtgttccatacctaatagcgcttgagacagatcctcag
gaagtgaactcaaagttggctcatcatttactgatgaatatgaatgaaaagtaccctgct
ttctttgaaagccgcctgggagatggccttcagatgtcatttgtttttatacaatccatc
ggtggtggttcttctgaatgtcgaaaccagaaattccaatccaaggctgcaggaactatg
aaggggaaatctgatggaagctctttaactcaagcaaggcttggggtttcacaaatttat
aagcttattcgtgggagccgaaattcgaggaacaaatttatgtcatccattgtccggaag
tttgataacccaagctgtagtgatttagtgattccttttttgatgtactgtactgaagtc
cttgccttacttccattttcttcacctgatgaacccctttatttgatttataccataaat
cgagttatacaagttagagctggagcactcgaggcaaatatgaaagcgatgaatacccat
atgttacaaagagatgctcagaagaccacctatgagaatggaatggttgatcaggaatca
gctgagcctgttttcaatcacatgacttcaatggatttaaatgggacaattaaggaagag
cctgctgctcagcctattttctatcatatgtcatcaatcgacttgaatggaacagtgcaa
ccggaacccaatgatcaaccactcttacatcgaatgcctccattggaggcaaaggtgcat
gtcatgagttcgggtgaaccacgtgacatccccaaagatgatcttcagaaagttcaggtt
gactgtatttcggctactgcactgcaacttcttctgaagctgaagaggtacctaaagatt
gtgtatggtttaaatgatgctcggtgccaggcatattctccaagtgaaccccaaaaacca
ggagaacctcttaccaagcagaacatcccctttgacatcagtgatacacgtgttgcgttg
ccatccacttatgaagacctcatgcagaaatatcaggaatttaagaatgcattgaaggaa
gatacagttgactatgcagtatacacagccaacatcaaaaggaagcgccctgcaccgaga
aagggggtgagatatggacgaattattggcggggatgatgatgaggactatagtgatgaa
gaatggggaggtggagctcggaagctgagtaatagcggcaggaaaagttatagttgtaga
aggaggtag
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