KEGG   Citrus x clementina (clementine): CICLE_v10010894mg
Entry
CICLE_v10010894mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K06672  cohesin loading factor subunit SCC2
Organism
cic  Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:cic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cic03036]
    CICLE_v10010894mg
Chromosome and associated proteins [BR:cic03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Adherin complex
    CICLE_v10010894mg
SSDB
Motif
Pfam: Nipped-B_C Cohesin_HEAT PDS5 PHD PHD_2 Cnd1 COP9_hel_rpt zf-RING_16
Other DBs
NCBI-GeneID: 18039730
NCBI-ProteinID: XP_006431278
UniProt: V4SAE9
LinkDB
Position
Unknown
AA seq 1822 aa
MSSFPSASTSGSGSGLGSTGQWGIGFSNTIHSEVAPCLPLPSLPVFCGATDPNLRLFDEA
SAGVSYRLLNRTEILTQSSRIADLLRVTDVSYLNLRDEAKPDPYSDMEPLELHNQVLQYN
AEAFEYVTPGHIKEQVSGGESFERKDREPSILGASGLQRDYIGAQNPHLDRILTNDVSTS
SSRKPKIKKKGGDNISSSAQPDPIEVQDATIMNFCEMLEDFCGRAEIPTDDQNDTELLSL
PVADVRIVVNEIMSLRAKKLLHLVSVDILVRLLRVLDHQIHRAEGLSVDEREHLDSDRVS
MVFCALESIHAALAVMAHDHMPKQLYKEEIIERVLEFSRHQITDVMSAYDPSYRALHKTS
ESAALEVDEDEEVDADLGSASKRRRTMKNVKVKRSAFNRVSGAVNSILQKLCTILGLLKD
LLLIERLSDSCILQLVKTSFTTFLVDNVQLLQLKAIGLLSAIFYSYTQHRTYVIDEILLL
LWKLPSTKRALRTYHLPDEEQRQIQMVTALLIQLVHSSANLPEALRKATSGSTILEVQID
SSYPTKCHEAATDTCCLFWTRVLQRFTSVKAQDASELKVMMENLVMDLLTTLNLPEYPAS
APILEVLCVLLLQNAGPKSKDVSARSMAIDLLGTIAARLKQEAVLCGRERFWMLQELVRE
DSSDQSYPKDLCCVCLDGRVEKRVFMCQGCQRLFHADCLGVREHEVPNRGWNCQLCLCRN
QLLVLQSYCKSHCKGDINKSHSRSESNPETSDTITKLEIVQQMLLNYLQDAVSADEMNLF
VRWFYVCLWYKDDPEAQQKSMYYLARLKSKEIVRESGTISLSLTRDTVKKITLALGQNNS
FSRGFDKILHLLLVSLRENSPIIRAKALRAVSIIVEVDPEVLCDKRVQLAVEGRFCDSAI
SVREAALELVGRHIASHPDVGLQYFVKVAERIKDTGVSVRKRAIKIIRDMCTSNTNFTES
TTACIEIISRVNDDESSIQDLVCKTFYEFWFEEPSGLQTQYFGDGSSVLLEVAKKTEQIV
EMSRGLPNHQLLVTVIKRNLALDFFPQSAKAAGINPMSLASVRRRCELMCKCLLERILQV
EEMNNEGMEMRTLPYVLVLHAFCVVDPTLCAPVSDPSQFVITLQPYLKSQVDNRVVAKFL
ESVIFIIDAVLPLVRKLPSSVIEELEQDLKHMIVRHSFLTVVHACIKCLCSVSKISGKGL
STVEHLILVFFKYLDSHNPDSKQFQQVGRSLFCLGLLIRYGSSLLTTSYEKNIDIVSNLN
LFKRYLRMEDFSVKVRSLQALGFVLIARPEHMLEKDIGKILEATLADSSHIRLKMQALQN
LYEYLLDAENQMETDKGSGNEVEYTVEDGHSVPVAAGAGDTNICGGIIQLYWDKILGRCL
DANEEVRQTALKIVEVVLRQGLVHPITCVPYLIALETDPQEVNSKLAHHLLMNMNEKYPA
FFESRLGDGLQMSFVFIQSIGGGSSECRNQKFQSKAAGTMKGKSDGSSLTQARLGVSQIY
KLIRGSRNSRNKFMSSIVRKFDNPSCSDLVIPFLMYCTEVLALLPFSSPDEPLYLIYTIN
RVIQVRAGALEANMKAMNTHMLQRDAQKTTYENGMVDQESAEPVFNHMTSMDLNGTIKEE
PAAQPIFYHMSSIDLNGTVQPEPNDQPLLHRMPPLEAKVHVMSSGEPRDIPKDDLQKVQV
DCISATALQLLLKLKRYLKIVYGLNDARCQAYSPSEPQKPGEPLTKQNIPFDISDTRVAL
PSTYEDLMQKYQEFKNALKEDTVDYAVYTANIKRKRPAPRKGVRYGRIIGGDDDEDYSDE
EWGGGARKLSNSGRKSYSCRRR
NT seq 5469 nt   +upstreamnt  +downstreamnt
atgagcagcttcccgagcgcttcgacttctggctcgggctcgggcctaggctcgaccggc
cagtgggggatcggcttttcgaacacgatacactcggaagtagctccgtgcttgccgttg
ccttcgcttccagtgttctgcggcgctacggatccgaacctgcggttgttcgatgaagct
agcgctggtgtcagttataggttgttgaatcgtactgagattctcactcagtcgagtcga
attgctgatctacttcgtgtaaccgatgtttcgtacttgaatcttagagatgaggcaaag
ccagatccctatagcgatatggagcctttagaacttcacaaccaagttctccaatataat
gcggaagcttttgagtatgtcactcctggtcatattaaggagcaagtttctggcggtgaa
tcatttgaaaggaaagaccgtgagccaagtatacttggcgctagtggtttgcagagagat
tatattggagctcagaatccccacctcgaccgtatccttacaaatgatgtatccacttca
tcatcccggaaacccaaaatcaagaagaaaggtggggataacatctcttcctcagctcag
cctgatcctattgaggttcaagatgctaccattatgaacttctgtgagatgttggaggat
ttttgtggcagagctgaaattcctactgatgatcagaatgacacagagttgttgtcttta
cctgttgctgatgtgaggattgttgtgaatgaaataatgtcattacgtgcaaagaaactt
ctacatttagtctcagtagatattctggtgagactattgcgggttctagatcatcaaata
catcgagcagaaggtttatcggttgatgaacgtgagcatctagattcagatagagtttcc
atggtcttttgtgcccttgaatcgattcatgcagctctagctgtaatggctcatgaccac
atgccaaagcagctttataaggaagagatcattgaaagggttttggagttctcgaggcat
caaataacagatgttatgtcagcttatgatccgtcatatcgtgctctgcataaaactagt
gaaagtgcagcacttgaggttgatgaagatgaagaggtggatgctgacttaggttcagct
agcaagagacggcggacaatgaagaatgtcaaagtgaagagatctgcatttaatagggtt
tctggtgctgtgaattcgatacttcagaagctctgtacaattcttggtttgctcaaggat
ttgttgttaattgagagattatctgatagttgcattctgcagctggtgaagacaagcttt
acgacatttttggtggataatgtccagctcttgcaattgaaggctatcggtttactaagc
gcgatattctattcatacacccagcatcgcacttatgtaatagatgaaatacttctgctt
ctttggaagctgccatccacgaaaagagcattgagaacttatcacctacctgatgaagaa
cagaggcagattcagatggtcactgctttgctaattcagttggttcatagtagcgcaaac
ctccctgaagctttgaggaaagcaacaagtggtagtaccatattagaagtccagattgat
tctagttacccaactaaatgccatgaagcagcaacagatacatgctgtttgttctggacc
cgcgttcttcagcgctttacaagtgtaaaggctcaggatgcttctgagctgaaagttatg
atggagaatcttgtcatggatttactgacaactttgaatttaccggaatatccagcatct
gctcctattctggaggttctctgtgtcttacttctacagaatgctgggccaaaatctaaa
gacgtctcagcacgttcaatggccattgaccttcttggtacaattgctgccaggttgaag
caggaagctgtcctctgcggccgggagagattctggatgttacaagaactggtcagagag
gatagttctgatcagagttaccctaaagatctatgttgtgtttgcttagatggaagagtt
gagaaaagggtgtttatgtgtcaaggttgtcaaagattgttccatgctgattgtttgggt
gtaagggaacatgaagtgccaaatcgtggctggaattgtcaactttgtctctgcaggaac
caacttcttgtactacaatcatactgcaagtcacattgcaagggtgacattaataagagc
cacagtcggtcagaaagcaatcccgaaacttctgatacaattacaaaacttgaaattgtt
caacagatgctcttgaattaccttcaagatgctgtttctgcggacgaaatgaatctcttt
gtgcgatggttttatgtgtgcctatggtacaaggatgatccggaagctcaacaaaagtcc
atgtactaccttgctagactgaaatcaaaagaaatagtgcgtgaatctgggactatttca
ttgtctttgactagagacacagttaaaaagatcactctagcactgggacaaaataattct
ttctctagagggtttgataagatccttcatctgcttctggttagtttaagggagaactct
cctataatcagggctaaggctttacgagcggttagtataatcgtcgaagttgatcctgag
gtgttgtgtgacaaacgtgtacagttggctgttgaaggaaggttttgtgactcagcaata
tctgtaagagaagcagcattggagcttgttggccggcatattgcttcacatcctgatgtt
ggtttgcagtattttgtgaaagtagcagagaggataaaagatacgggagtaagtgtgcgg
aaaagggcaatcaaaatcatccgagatatgtgcacatcaaacactaacttcactgaatct
acaactgcttgcatcgagatcatatctcgtgttaatgatgatgaatccagtatacaggat
cttgtctgcaagaccttttatgagttctggtttgaggaaccttctggattgcagactcaa
tattttggagatggtagttctgttctgttggaggtggctaagaagactgagcagattgtt
gaaatgtcaagggggttgccaaatcatcagcttctggtcactgtcattaagcgcaactta
gctcttgattttttccctcagtcagctaaagctgctgggatcaaccctatgtcacttgca
tcagtacgtcgacgttgtgaactaatgtgcaagtgcttattggaacggatattgcaggta
gaggagatgaataatgagggaatggagatgcgtacccttccctatgtgctggtcttgcat
gcattttgtgtggtggatccaacactttgtgcacctgtttcagacccttcccagtttgtc
atcactctgcagccatatctcaagagtcaggttgataatcgagtggttgcaaaatttcta
gagagtgtaatttttataattgatgctgtgttgcccttggttcgaaagctaccttcgagt
gtcattgaagaactggaacaagacttgaagcacatgattgttcggcattcttttttgaca
gtggtccatgcttgcatcaagtgtctgtgctctgtgagtaaaatatcaggaaaagggtta
agcacagttgagcatcttattttggttttcttcaagtatttggatagccacaatcctgat
agcaagcagtttcagcaagtggggcggtctcttttctgtcttggattgcttatccgttat
gggagttctctgctgactacctcatatgagaaaaatattgatattgtcagcaatctcaat
cttttcaaaaggtatcttcgtatggaggattttagtgtaaaggttagatctttgcaggcc
ttaggctttgttttgattgctagaccagagcatatgttggaaaaggacattggcaagata
ttagaggcaacattggctgattcttctcatatccgacttaagatgcaagctttgcaaaat
ctgtatgaatatcttcttgatgcggaaaatcaaatggaaacagataaaggcagtggtaat
gaggttgaatacactgtagaagatggccacagtgtacctgttgctgccggtgcaggggat
acaaacatatgtggaggtataattcagttgtattgggataagatattgggaagatgcttg
gacgctaatgaggaagttcgccagactgcccttaagatagtggaagtagtgctccgtcaa
ggtcttgttcatcctattacttgtgttccatacctaatagcgcttgagacagatcctcag
gaagtgaactcaaagttggctcatcatttactgatgaatatgaatgaaaagtaccctgct
ttctttgaaagccgcctgggagatggccttcagatgtcatttgtttttatacaatccatc
ggtggtggttcttctgaatgtcgaaaccagaaattccaatccaaggctgcaggaactatg
aaggggaaatctgatggaagctctttaactcaagcaaggcttggggtttcacaaatttat
aagcttattcgtgggagccgaaattcgaggaacaaatttatgtcatccattgtccggaag
tttgataacccaagctgtagtgatttagtgattccttttttgatgtactgtactgaagtc
cttgccttacttccattttcttcacctgatgaacccctttatttgatttataccataaat
cgagttatacaagttagagctggagcactcgaggcaaatatgaaagcgatgaatacccat
atgttacaaagagatgctcagaagaccacctatgagaatggaatggttgatcaggaatca
gctgagcctgttttcaatcacatgacttcaatggatttaaatgggacaattaaggaagag
cctgctgctcagcctattttctatcatatgtcatcaatcgacttgaatggaacagtgcaa
ccggaacccaatgatcaaccactcttacatcgaatgcctccattggaggcaaaggtgcat
gtcatgagttcgggtgaaccacgtgacatccccaaagatgatcttcagaaagttcaggtt
gactgtatttcggctactgcactgcaacttcttctgaagctgaagaggtacctaaagatt
gtgtatggtttaaatgatgctcggtgccaggcatattctccaagtgaaccccaaaaacca
ggagaacctcttaccaagcagaacatcccctttgacatcagtgatacacgtgttgcgttg
ccatccacttatgaagacctcatgcagaaatatcaggaatttaagaatgcattgaaggaa
gatacagttgactatgcagtatacacagccaacatcaaaaggaagcgccctgcaccgaga
aagggggtgagatatggacgaattattggcggggatgatgatgaggactatagtgatgaa
gaatggggaggtggagctcggaagctgagtaatagcggcaggaaaagttatagttgtaga
aggaggtag

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