Citrus x clementina (clementine): CICLE_v10010909mg
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Entry
CICLE_v10010909mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K10891
fanconi anemia group D2 protein
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
CICLE_v10010909mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cic03400
]
CICLE_v10010909mg
DNA repair and recombination proteins [BR:
cic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
CICLE_v10010909mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FancD2
FANCI_S2
FANCI_S1
DUF1510
Motif
Other DBs
NCBI-GeneID:
18038592
NCBI-ProteinID:
XP_006429743
UniProt:
V4S692
LinkDB
All DBs
Position
Unknown
AA seq
1407 aa
AA seq
DB search
MVFLHQQKSSLKRDSSSSSKSTFPVPPSKIPKSVDSEIEKMVSILADAGCTLMYHSGPPC
LPSDPNKFRRHLTNLLSHDSSLRSHFLAGFSSYVQSPKNFNRVLSSLSPGRSDSLVRQLL
LVPCIQLDLMHMLLEKLPEYFDVNPETQTSLSFEEDVGRLIISQFRWLDFLVDPKSFTEK
LMEVLCICPSHLKKEIIGSLPEIIGDQSNNKSVIDSLQQMLSEDSAIIVPVLDSFSNLNL
DDELQEQVVTIALSCIRTIDAEHMPHLLRFLFLSATQSNVRRIISHIRQHLKFVGVSNSR
ASQQNKLKGKSLVDNSEASILDALRSSLRFKNMLCQEILKEIDGLKKPQDHKVIDIWLLV
LMYMNGDPLRKSVSKIFKKKVIEDCIHNVMLDQCIRGNKELVQDHFPSFLSLSEYLLACK
EQKAREFGIHVYTCLFEEFTDTYSRQEVLGALITHVGSGVSFEVSSALETMALLASEYAW
ELIPLSSHINGILDYLEGYSAQNLHKVYEVFSSLALSARTSAPCYGTSIANELLMVVRKQ
VSHSELKYKKMGLIGALKIVSYLGDAGIVTSTSPSQKSNAEEAVELLKTSLNCCKQLYLP
LTLFYDELTAILNSRTLQPEIIEWIVKHVGEFESIYLSDLECGQLSNKNSFCGIEGELWM
NLDGDISPICLNILPLASSSSQSASLQVLHANFLLLSTVERLTNQGSLGGIDALLGCPLH
LPSSKCFSVAGWQSLTEKQKQIVTLSLYHAANWIRELLNAFCTQVAGRLECISQTTKQEI
IAKLLKRVRNLVVLESLLNYAIKCCPQSLPDVHLHVEKCGSSLLSKPNNMGHMEKKNEHI
KTYDSASQDKKRRHKKISKASTISDTNCKLRQPTILDVLRKSGNLTSQGVLTEDALSTVS
NSSKFGSVDETSCGSNEPVIVEVSALAKVLETQRFKFRPLLFPCLSILTFSKNQDSCCSD
PAAELPLYLYLLRDLHYKLDYFSPPSKLLSPRFFSIPAGFTRMTVEKFLSEVKSVLPYLR
KHFDSAVTLLKEGDETCEDHWKVQSAITGNPDIPNLMFSKSSVSSLVIKEVLNCFSKMLN
LPEAQKDKSVLSDLLQSFQPIEIPASVISDIQPIPLPGTIDYLYLGAFSFLEGVLNIACS
FSFTLASESLLTLESIVMSLQKFLDKLEGNGKSTHSKSIEGSLHVLHERLGTSAQNLLQC
KWDNESLENGWKNKGDIVQKILWIYLEHSKSTCDLLHELACSILPQVTLHRTIIEDNHHG
FPTLCPATLFVWYRVLHEVNLSILNKLVSFVHLERCKTAVRPETIQSHLMKMHKCVNVVV
SLVSMCRNHEKVTVHGMAVKYGGKFVDFFLKSFDFLQAHFQTHNETIIQLLKELQKATRT
IQILCSEAKVSISYFDLFQDQFTSSLL
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atggtgttccttcaccaacagaagtcttcactcaaaagagactcctcttcctcttcaaaa
agcacattccccgttcctccttccaaaatccccaaatccgttgattcagaaatcgaaaaa
atggtctcaattttagcagatgccggttgtactctaatgtaccactcggggccaccgtgt
ctcccttctgatcctaacaagttccgtcgccacctcaccaatctcctctctcacgactcc
tcacttcgctcccatttcctcgccggcttctcttcttatgttcagtctcccaaaaatttc
aacagggttctgagctcattgagtcctggcagaagcgacagcttagttcgacagcttttg
ctggttccgtgtattcaattagacctaatgcacatgcttctcgagaaacttccggaatat
tttgatgtgaatccagagacacagacatcattgtcttttgaggaggacgttggtaggctt
attattagtcaatttcggtggcttgattttctcgttgatccgaaatcctttaccgagaaa
ttaatggaagtactttgtatttgtccttcacatttaaagaaagagattattggttcattg
cctgagattataggtgatcaaagcaataataaatccgttattgattctctccaacaaatg
ctcagtgaagattcagctataattgtgcctgtgcttgactccttttcgaacttgaatttg
gatgatgagctgcaagaacaggttgttaccatagcattatcgtgtattagaacaattgat
gcggaacacatgccacatttacttagattcttatttctttcggcaacacaatcaaatgtt
cgaagaattatctcacacattcgtcagcacttaaagtttgttggagtgtcaaattctcgt
gcatcacaacaaaataaacttaagggaaagtctcttgtggataattcggaggcgtccatt
cttgatgccttgagatcaagtcttcgatttaagaatatgctttgtcaggagattttaaaa
gaaattgatggtcttaagaaacctcaggatcacaaagttatagacatatggcttcttgtt
ctcatgtatatgaatggggatcccctacgaaagagtgtttcgaagattttcaagaagaaa
gttattgaagattgtattcacaatgttatgcttgatcagtgcattcgtgggaacaaagaa
ttggtgcaggatcattttccatcatttctttctttgtccgagtacttattggcgtgcaaa
gaacaaaaggcaagggagtttggtattcatgtgtatacttgcttgtttgaagagtttact
gatacatattcaagacaggaagttcttggtgctctaattacgcatgtgggatctggtgtg
agttttgaagttagttcggctctggagacaatggctctgctggcatcagaatatgcatgg
gaattgattccactttcttctcatataaatggtatcttggattacttggagggttatagt
gctcaaaatttgcacaaggtctatgaggttttcagcagtctagcactgtcagctcgaacc
agtgcaccctgttatggaacttccattgcaaatgaacttctgatggtagtaaggaagcag
gtcagccattcagaactgaagtacaaaaagatgggcctgattggagccttgaagattgtt
tcatatctgggcgatgctggtattgttaccagtacatctccatctcagaaatcgaacgct
gaagaggctgtagaactcttaaaaacatctctgaactgctgcaaacagctatacttacct
ttgactctcttttatgatgagctaactgcaatactgaacagcagaacactgcagccagaa
attatagaatggatcgtcaaacatgttggggagtttgaatccatatatctgtctgatctg
gaatgtggacaactatctaataagaactcattttgtggtatagaaggtgaactatggatg
aacttggatggagatatatctccaatttgtttgaacattttgccattggcttcctcttcc
tcacagtctgcttctctacaagttcttcatgctaacttccttttactctctactgttgag
aggttgacaaatcagggatctcttggaggaattgatgcactgcttggttgccctttacac
cttccttcctctaagtgcttctctgtagctggttggcaatctctcacggaaaagcagaaa
cagattgtgaccctctctctttatcatgcagcaaattggatacgggaactgcttaatgcc
ttctgcacgcaagttgctggaagactggaatgtataagtcagactacaaaacaggagata
attgccaagctattgaagcgagtgaggaacctagtagttcttgaaagcttgttaaattat
gccatcaaatgctgccctcaatctcttcccgatgtccatcttcatgtggagaaatgtgga
tcttcactcttgagtaagcctaataatatggggcacatggaaaagaagaatgaacatatt
aaaacatacgacagtgcctctcaagacaagaaaaggagacataaaaagatttcaaaggca
tcaacaatttcagatacaaactgtaaattgcgtcagccgacaatattggatgttttgaga
aagtcaggaaatctgacaagtcagggggtgctgactgaggatgctttaagtacagtttca
aacagctcaaaatttgggtccgtagatgaaacttcctgtggctctaatgagccagtaatt
gtagaagtttctgcacttgccaaggttctggaaacccaaaggtttaaattcaggcctctt
ctctttccatgcctctccattttgacattttctaagaaccaagattcctgttgctctgat
cctgcagctgagttacctttgtacctgtaccttctacgtgatcttcactacaagctggat
tatttctctcctccgagcaaactattatcacccagattctttagtattcctgctggtttt
acaaggatgactgtggaaaaattcttgagtgaagtaaaatcagtattgccatatctcagg
aagcattttgatagtgcggttactcttcttaaagaaggtgatgaaacctgtgaagatcac
tggaaagtgcagtctgctattactgggaatcctgatataccaaaccttatgttttccaaa
tcttctgtttcctctttggtcatcaaagaagtactcaattgtttcagtaagatgctgaac
cttcctgaggctcaaaaggacaaatcagttctctctgatttgcttcaatccttccagcct
attgaaataccagcctctgttatttcagacatacaacctatccctttacctgggacaata
gactatttatatcttggagctttctcatttctagaaggtgtcctgaatatagcctgttct
ttctcctttacgcttgcatcagaatcccttcttaccctagagtccattgtaatgtcactt
caaaagttccttgataagttggagggaaatggtaaaagtacacactcaaaatctatcgag
gggtcccttcatgtcttgcatgaaagacttggaacttctgctcagaatctgttgcagtgt
aaatgggataatgaaagtcttgagaatggatggaagaacaaaggagatatagtacagaag
atactatggatttatttggaacatagcaagtccacttgtgatttgttgcatgagcttgcc
tgctccatcttgcctcaggttactctgcacagaacaataatagaagataatcatcatggt
tttccaactctgtgtcccgcaacattgtttgtatggtaccgggtactgcatgaagtcaac
ctttctattctcaacaaattggtgagctttgttcacttggagagatgcaagactgctgtt
cgacctgaaaccattcaatcacatttaatgaaaatgcacaagtgtgtgaatgtggttgtg
tcattagtaagtatgtgcaggaatcatgagaaggttactgtgcatggcatggctgtcaag
tatggtgggaagtttgttgattttttcctgaaatcttttgacttcttgcaggcccacttt
caaacgcataatgaaacaataatccaattgttgaaggagctccaaaaggccacaagaaca
atacagattctatgttctgaagcaaaggtttccatttcatatttcgatctgttccaagac
cagtttacatcttcactattatag
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