Citrus x clementina (clementine): CICLE_v10010911mg
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Entry
CICLE_v10010911mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cic03036
]
CICLE_v10010911mg
Chromosome and associated proteins [BR:
cic03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
CICLE_v10010911mg
microRNA pathway
RISC loading complex
CICLE_v10010911mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
DEAD
Helicase_C
ResIII
PAZ
SNF2-rel_dom
Cas3-like_C_2
SWI2_SNF2
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
18039378
NCBI-ProteinID:
XP_006428678
UniProt:
V4S3G0
LinkDB
All DBs
Position
Unknown
AA seq
1401 aa
AA seq
DB search
MEPVSMELDTTEQVSADTLPFARNYQLEALENALKQNTIVFLETGSGKTLIAIMLLRSYA
YLLRKPSPFVAVFLVPKVVLVPQQAEAIKKHTDLKVGMYWGDMGIDYWDAATWKEEMNKH
EVLVMTPQILLDGLRLSYFKLNMIKVLILDECHHARGKHQYACIMTEFYHHQLKAGDSNL
PRIFGMTASPIKSKVASSEQDYWQKIHGLETLMNSKVYTCASESVLSNCIPFSTPKFKFY
GDDEIPHALYTRLADDLEKIELKHNRSLENLDLNEAQAESIRKNISRIKSTLLYCLNGLG
VWLALKAAETLSCYKSDFFAWEQLDGFGETIMKKFGSDAFQALVTCIPSGAGWSIGDDSK
FNMDSGLLTEKIVCLVESLLEYRGLEDIRCIIFVERVITAIVLQSLLSELLPRHCTWKTE
YVAGNNSGIQCQSRNKQNEIVEEFRRGLVNVIVATSILEEGLDVQSCNLVIMFDPSHTVC
SFIQSRGRARMQNSDYLLMLKSGDSITQSRLENYLVSGDTMRKEALSHASLPCSPLNNHM
YGEDFYHVESSGAIATLSSSVHLIHFYCSRLPSDGYFKPTPKFDINKEMGICTLYLPNNC
PIQTVIAQGNIKTLKQTACLEACKKLHQIGALTDNLLPDIVVEEHDAQKHGNEPYDAEHP
IYFPPELVNQCPQDTKITYHCYLIELKQNFNYDIPAHDIVLAVRTELESEIKKVNFDLEV
DRGRLTVNLKHLGKIQLTPDKVLLCRRFQIALFRVIMDHNLDKLNEILKGLRLRDNLEID
YLLLPASEQLIDWEPVASLSFPCDIGLKHHKNCSTMSNARVVQTKSGPLCTCMIHNSVVC
TPHSGQIYYITGVLGHLNANSLFTRNDGSAITYKKHYEERYGIQLCFDQELLLNGRRIFH
AQNYLSKCRQEKQREPSKISFELPPELCRIIMGPMSLSTFYSFTFVPSIMHRLQSLLLAV
NLKNMLLDHCMQNVTIPTSKVLEAITTKKCQEGFHLESLETLGDSFLKYAASQQLFKTYQ
NHHEGLLSVKKDRIISNAALCKLGCDHKLPGFIRTEPFDPKMWMIPGDNSGSYELNDHSL
FNERKIYVTGRKKVKSKTVADVVEALIGAFLSTGGENVGLIFLDRIGIKVDFVNVPYERQ
FQVQVERLVNVRHLELLLNYSFCDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYL
ITVYLYNKYPTLSPGDLTDMRSASVNNDCYALSSVKHGLHKHILHASQELYKWINITVDS
FERLSLESTFGWESETSFPKALGDIIESLSGAIFVDSGCNKEVVFESIRPLLEPMITPET
MRLQPARELNEYCQKHHFAMKKTVAPRINGKAAVTVEVHANGTLFKHTHADADKETAKKV
ASKEVLKSLKASFPGTWLHLS
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atggagcctgttagcatggagttggacacaacagagcaagtatctgccgacaccctgccc
ttcgccagaaactatcagctagaagcactggagaatgcacttaagcaaaacactattgtg
tttctggaaactgggtctggcaagactctaattgccatcatgcttcttcgaagctatgct
tatcttctgcggaagccttcaccttttgttgctgtcttcttggttcccaaagtagttctg
gtacctcagcaagctgaagctattaaaaagcataccgacttgaaagtgggcatgtactgg
ggagatatgggaattgactactgggatgctgctacatggaaggaagaaatgaacaaacat
gaggtacttgtgatgacacctcagattttgcttgatggcttgcggctcagctatttcaaa
ctaaacatgatcaaggttttaatacttgatgaatgccatcatgccaggggtaaacaccaa
tatgcttgtattatgacggagttctatcaccatcaattaaaagctggtgactccaatctt
cctaggatttttgggatgactgcatctcccataaagtcaaaagttgctagttcagaacaa
gactattggcaaaagattcatggtcttgagactcttatgaattcaaaggtctatacatgt
gccagtgaatctgtgctctctaattgcataccattttcaactccaaagttcaagttttac
ggggacgatgagattccacatgctttgtatactcgcttagccgatgatctagagaagata
gaattaaagcataatcgatcattggaaaatttggatctgaatgaagctcaagcagagtca
ataaggaagaatatatcaagaataaagtcaactttgttatattgtttaaatgggcttggt
gtttggttggctttgaaggctgcagagaccttatcatgctataaaagtgatttttttgct
tgggaacaattggatgggtttggcgagacgatcatgaaaaagttcggctcagatgcattt
caggcattggtgacttgtataccatctggcgcagggtggtccataggtgatgattctaaa
tttaacatggattctgggcttctgacggagaaaattgtttgtctggtcgaatcgcttctt
gagtacaggggcttggaggacataagatgtataatttttgtagaaagggtcattacagcc
attgtgcttcaatctctgttgagtgagctgcttccaagacactgtacatggaagactgaa
tatgttgccggaaataactcagggatacaatgtcaatcaaggaacaaacagaatgaaatt
gtggaagaatttcgtagaggcttggtgaatgtcattgttgcaacatcaattcttgaggag
ggtttagatgttcaaagttgcaacctggttattatgttcgatccttcacacactgtttgc
agtttcatacagtctagaggtcgtgctagaatgcagaattcggattatttattaatgttg
aagagtggggattctattacacaatctaggctagagaactatcttgttagtggggacaca
atgagaaaggaagctcttagccatgcatcgcttccctgctcccctcttaataatcatatg
tatggtgaggatttttatcacgttgaaagctcaggagcaattgcaactcttagttccagc
gttcatttgatacacttttactgctcacggctcccttctgatggatattttaagcctact
ccaaagtttgatataaacaaggagatggggatttgcacactgtatcttcccaacaactgc
cctatacaaactgttattgcacagggaaacattaaaactctgaagcaaactgcttgtctt
gaagcttgcaagaagcttcaccagattggtgctttaacagataatcttcttcctgatatt
gttgtggaagaacatgatgcacaaaaacatgggaatgaaccatatgatgctgaacatccc
atttacttccctcctgagctagtgaatcagtgtccacaagataccaagataacataccat
tgctacttaatcgaactgaagcagaactttaactatgatattccagctcatgatattgtg
cttgctgtgaggactgaacttgaatctgaaattaaaaaggtgaattttgatttggaagtt
gataggggtagattgacagtcaacctgaagcatcttggaaaaattcagcttaccccagat
aaggtccttctttgtaggaggtttcagatagctcttttcagagtaattatggatcataat
ttggataaattgaatgagattttgaagggactccggctgcgggataatcttgagatagat
tatcttttgctcccagccagtgaacagttgattgattgggaacctgttgcttctctgtct
tttccttgtgacattggtttgaagcatcacaagaattgttctacaatgtctaatgctcgt
gttgtacagaccaaaagcggtccgttgtgcacatgcatgattcataattctgtagtctgc
acccctcacagtggtcagatatattatatcacgggcgttttaggccatttgaatgcaaat
tcactttttacgaggaatgatggaagtgctatcacatacaagaagcactatgaagaacgg
tatggtatccagctgtgttttgatcaagaactcttgcttaatgggagacgtatttttcat
gcgcaaaattaccttagtaaatgccggcaagaaaagcagagagagccgagtaagatatcg
tttgaactgcctcctgagctgtgtcgcataatcatgggtcctatgtcactcagtacattt
tattctttcacgttcgttccatcaattatgcatcgtcttcagtctttgctccttgctgtc
aatttgaagaatatgcttttggatcattgcatgcaaaatgttaccattccaactagcaag
gtgttggaagcaatcactacaaagaagtgccaagagggttttcatctagaatctctagag
actcttggagactcttttcttaaatatgcggctagtcagcagctgttcaagacatatcaa
aatcatcacgaaggccttcttagtgttaagaaggacagaataatatcaaatgctgcactt
tgcaagctaggatgtgaccacaagcttccggggtttattcgcaccgagccttttgatcct
aaaatgtggatgattcctggtgataattcaggaagctatgaattgaatgaccactcactt
ttcaatgaaagaaaaatttatgtgactggaagaaagaaggttaaaagtaagacagttgct
gatgtagttgaggcactaattggtgcattccttagcacaggcggggaaaatgtgggatta
atattcctggataggatcggcataaaggtggattttgtgaatgtaccatatgagcggcag
ttccaagtgcaagtagagaggcttgtcaatgtccgccatttagagttgctcttgaattac
tcattttgtgatccatctttattagtggaggccttgacccacggttcttacatgcttcct
gagattccaagatgttatcagcggctggaatttcttggagatgcagtgttagattatctc
atcactgtttacttgtacaacaagtatcccacactttcgccaggagacttgactgatatg
aggtctgcttccgtaaacaacgattgttatgcgctgtcttcagtcaagcatgggttgcat
aagcatattctgcacgcttcacaggaactgtacaagtggataaacatcaccgttgacagt
tttgagagattatccttggaatctacttttggatgggaatctgagacatctttcccgaag
gcactgggagacattatcgaatctctgtccggggcaatatttgttgattctggatgcaac
aaggaggtagtgtttgagagtataaggccacttttggagccgatgattactcctgagaca
atgagactccaaccagcaagggagttgaacgaatactgccaaaaacatcattttgctatg
aaaaaaaccgtggctccgcggatcaatggtaaggctgctgttaccgtagaagtccacgca
aatggtacattgttcaaacacacacatgcagatgctgataaagaaacagctaaaaaggtt
gcaagcaaagaagtgttgaagtccctgaaggcaagttttcctgggacttggcttcatttg
agttaa
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integrated database retrieval system
