Citrus x clementina (clementine): CICLE_v10010921mg Help Entry CICLE_v10010921mg CDS       T02982                                  Name (RefSeq) hypothetical protein   KO K06100   symplekin Organism cic  Citrus x clementina (clementine) Pathway cic03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:cic00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     CICLE_v10010921mg  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cic03021]     CICLE_v10010921mg    03019 Messenger RNA biogenesis [BR:cic03019]     CICLE_v10010921mg Transcription machinery [BR:cic03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      CICLE_v10010921mg Messenger RNA biogenesis [BR:cic03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      CICLE_v10010921mg     U7-dependent histone pre-mRNA processing factors      CICLE_v10010921mg BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N HEAT_2 CRM1_C HEAT_EZ Motif Other DBs NCBI-GeneID:  18038118 NCBI-ProteinID:  XP_006429396 UniProt:  V4SZJ5 LinkDB All DBs Position Unknown AA seq 1327 aa AA seqDB search MVGMTNSNSREKYLSLVYSVKAAINLPSKLEYLRRLKQALLDEENALLISEIIPCFFDLF SDSFAPVRKFATEVTGEVGLKHVQLVPEIVPVLISVLDDATPAVARQAITSGLDLFRFTL EKVAIQGLHSSDLDSSLESSWEWMLKFKDKVYSIAFQPGGGGVRLLALKFVEAVILLYTP DPNGSLKPPSDEENLVEFNISWLRGCHPLLNVGDLSIEASEKLGLLLDQLRSPTVKSLSS LVVVVLINSLSAIARKRPPYYGRILPVLLGLDPPTSVIEGMHISGPQHALKNALLACLKC THPGASPWRDRLVGALKEMEAGDLAENALKQFSKANGNVEEKDDMPAKEEKPSNRTCDAV QSNLGRKRSGADDGCDLEGDDDVSGKRARPTPSDSEALSQDHRPSTGSTSNKGNSDSGPV QQLVAMFGALVAQGEKAVSSLEILISSISADLLAEVVMANMCNLPPYLPQAEGDEESVLN MSIVGSDTGAKYPASFVANVLSLSSSFPPVASLLDAHQPISSDIGKLQKEEELHAADGDD GASVDDGISHVAGNAMLPPGSLANSDVLPVTENADSSVSAGLHAIGNIESDIPGLSSSGR NDGFSETLVASSSATTDLEDASQEQVTSGRSPLDLPSVSTDRSDELSSKAAITDTQSLIS STATSVSLPSHFVLPKMSAPVVELSDEQKDQLQKLSYIRIVEAYKQIAVAGGSQIRLSLL ASLGVEFPSELEPWKLLQEHILSDYVNHEGHELTLRVLYRLFGEAEEEHDFFSSTTAASA YEMFLLTVAETLRDSFPPTDKSLSRLLGEVPYLPKSVLKLLEGLCLLGSFDKGEKELQSG DRVTQGLSAVWSLILLRPPLREDCLKIALLSAVHCSEEVRMKAIRLVANKLYPLSSIAQQ IEDFAQERLLSTINGDGKVKKDAEVSTNGPQKDSDLEKPSNELMSGSTVSKDISSDIHQS STSPSMSSLSIPEAQRCMSLYFALCTKKHSLFREIFILYKDASNVVKQAVQRHIPILVRT IGSSSELLEIISDPPGGSESLLMQVLHTLTDGTIPSPELIFTIKKLYDSKLKDVEILFPI LPFLPGDEILVIFPHLVSLPQDKFQAALARILQGSSNSGPVLSPAEVLIAIHGIDPDKDG IPLKKVTDACNACFEQRQIFTQQVLAKVLNQLVEQIPLPLLFMRTVLQAIGAFPALVDFI MEILSRLITKQIWKYPKLWVGFLKCAQLTQPQSFNVLLQLPPPQLENALNRISALKAPLV AHASQPNIRSSLPRSVLAVLGIALDTQTSSQAQTSQAQTSQGQTGDISNSEKEAVTEKSK EESSVAS NT seq 3984 nt NT seq  +upstreamnt  +downstreamnt atggtgggaatgacgaattcaaattcaagagaaaaatacttgagtctagtgtattcagtt aaggcagccattaacttaccttcgaaactcgaatacttgcgtcggctaaagcaagctttg cttgatgaagaaaacgctcttttaatttccgaaattatcccttgtttcttcgacctcttt tccgattcgttcgctccggttcgcaaatttgccaccgaggttactggtgaagttggattg aagcacgtgcaacttgtaccagaaattgtgcctgttttaatcagtgttttagatgatgct acgcctgcagttgctcgacaagctataacttctggacttgatttgtttcgattcactctt gaaaaagttgctatccagggtttacattccagtgatttggacagttcacttgagtcatcc tgggaatggatgttgaagttcaaggataaagtatactcaatagcttttcagccaggaggt ggtggggtaagattgctagctctgaagtttgtagaagcagttattcttctgtacacaccc gatcctaatggctcactaaagcccccttctgatgaagaaaatcttgtagaatttaatata tcttggcttcgtgggtgccatcctctacttaatgttggagatttgtcaatagaagccagc gaaaagttgggattattgcttgatcagcttaggtctccaactgtgaaatctctcagtagc ttagtggttgttgtgcttattaatagtctttcagcaatagcgaggaaaagacctccatat tatggacgcattttgccagttttacttggtctggatcctccaacctctgtcatagaaggg atgcatatttctggtccacaacatgctctaaaaaatgccctccttgcctgcttgaaatgt acacatccgggtgcttcaccgtggagggatcggttagttggtgccctgaaagagatggaa gctggagatttggcagagaatgccctaaaacaattttccaaagctaatggaaatgtagaa gagaaagatgatatgccagctaaggaagagaagccctcgaatagaacatgtgatgctgtg caaagtaacttgggaagaaagagatctggggcagatgatggttgtgacctggaaggagat gatgatgtatctggaaaacgtgctagaccaacacctagtgactcagaagcactatctcaa gatcatcgtccttcaactgggtcaacctctaacaaaggaaacagtgattctggtcctgtg cagcagcttgttgccatgtttggtgccttggttgctcaaggtgaaaaagctgtttcatct ttggagatacttatttcaagtatctcagctgacttgctagccgaggtagtgatggccaat atgtgtaaccttcctccctaccttcctcaagctgaaggagatgaagaatcagtgttgaac atgagtatagttggcagtgacactggagccaagtatccagcatcgtttgtggctaatgtt ctttcactttcaagtagcttcccaccagtagcttcacttctagacgcgcatcagccaatt tccagtgatatagggaaactgcaaaaggaggaagagcttcatgctgcagatggggatgat ggcgcttctgtagatgatggcataagtcatgtagctggaaatgcaatgctgcctcctggt tcactggctaattctgatgttttgcctgtgacagagaatgctgattcatctgtttcagct ggtctccatgctataggaaatatagagagtgatattcctggtctaagttcttctggtcgt aatgatggattttccgaaaccttggttgcttcctcgtcagctactactgatttagaagat gccagtcaagagcaagttacaagtggaaggtcacctctggatcttccgtcagtatcaaca gataggtcagacgagcttagttcaaaagcagctattacagacacacagagccttatttcc tcaacagcaacctctgttagtttgccttctcattttgtactgccaaagatgtcagcacct gttgttgaactctctgatgaacagaaggatcaattacaaaaattatcttatattcgcatt gttgaagcatataagcaaatagcagttgctgggggttcccaaatccgcttatctttactt gcttctttaggtgtcgagttcccctcggagttagaaccatggaaattgttgcaggagcac atcttgtctgattatgtgaatcatgagggacacgagttgacattgcgtgtgctctatagg ttatttggtgaggcagaagaggaacacgacttcttttcttccacaactgctgcttctgca tatgaaatgttccttcttactgtggctgaaacacttagagattcttttccacctacagat aaatccctaagtagattgcttggtgaagttccttatttgccaaagtcagttctgaaatta ttagagggcttatgtttacttggaagcttcgataagggtgagaaggagttacaaagtgga gaccgagttactcaaggtctcagtgctgtgtggagcctgattttgctgaggcctcctctg cgagaggactgcttgaaaattgctttgctgagtgcggttcattgctcagaggaagtgcga atgaaggcaatacgactggtggcgaacaagctttatcccttgtcatccattgctcaacaa atagaagattttgcccaggaaaggttgctctctacaataaatggggatggcaaagtgaaa aaggatgctgaagtgtcaaccaatgggccgcagaaggattctgatttggaaaagccatca aatgagctcatgtcagggagcactgtcagtaaagatatctccagtgatattcatcagtca agcacgtcacccagcatgtcatccctttcaatccctgaggctcaacggtgcatgtcactt tattttgctctctgtacaaagaagcattctcttttccgggaaatatttattctgtataaa gatgcatcaaatgtggtaaagcaggctgtccaacgtcacatccctattctggttcgtact attggctcatcatctgaacttcttgaaattatctcagatcctccaggtggaagcgaaagc ctgttgatgcaggttttgcatacattgactgatgggacaattccttctccggaattgata tttactattaaaaagttgtatgattccaaattaaaggatgtagaaattctatttccaata ttgccattcttgccgggagatgagatcttggtgatatttccccatcttgtgagtcttccc caagacaaattccaagcagcacttgctcgtatactacagggatcatctaattcaggtcca gtgctctctccagctgaagtcttaatagctattcatgggattgatcctgacaaagatgga attcccttgaaaaaggttacagatgcatgtaatgcttgttttgagcaaaggcagatcttc acccaacaagttcttgctaaagtcttgaatcaattggttgagcagattccccttccctta ttgttcatgcgtacggtattacaagcaattggtgcttttccagcactggtggactttata atggagatcctttctcgtcttataaccaaacagatatggaagtaccctaagttgtgggtt gggttcttgaagtgtgcacagttgacacagcctcagtcattcaatgtgttgcttcagctt cctccaccgcagctggaaaatgcattgaatagaatatctgccctcaaggctcctttggtc gctcatgctagccaaccaaatatccggtcctcacttcctaggtcggttttggccgttttg ggaattgccttggatactcagacttcaagtcaggcacagacaagtcaggcacaaacaagt cagggtcagactggagatataagcaactcggagaaggaggctgtgacagagaaatctaag gaagaatcatctgttgctagctga

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