Citrus x clementina (clementine): CICLE_v10010936mg
Help
Entry
CICLE_v10010936mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CICLE_v10010936mg
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cic02000
]
CICLE_v10010936mg
04147 Exosome [BR:
cic04147
]
CICLE_v10010936mg
04090 CD molecules [BR:
cic04090
]
CICLE_v10010936mg
Enzymes [BR:
cic01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
CICLE_v10010936mg
Transporters [BR:
cic02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
CICLE_v10010936mg
Exosome [BR:
cic04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
CICLE_v10010936mg
CD molecules [BR:
cic04090
]
Proteins
CICLE_v10010936mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
AAA_30
ABC_ATPase
Zeta_toxin
RsgA_GTPase
AAA_21
AAA_16
AAA_25
AAA_15
AAA_23
DUF815
AAA_28
SLATT_6
Motif
Other DBs
NCBI-GeneID:
18038354
NCBI-ProteinID:
XP_006431030
UniProt:
V4SYY3
LinkDB
All DBs
Position
Unknown
AA seq
1222 aa
AA seq
DB search
MSGEKKASGSSEVTKTKNGSFRSIFMHADGVDMFLMVLGYIGAIGDGFSTPLVLFLTKGY
CWTRTGERQATRMRARYLKAVLRQDVGYFDLHVTSTAEVITSVSNDSLVIQDAISEKLPN
FVMNASLFFGCYLVAFLMLWRLAIVGFPFVVLLVIPGLMYGRTLMSLARKMRDEYNKAGT
IAEQAISSIRTVYAFVGESKTINEFSSALQGSVQLGLKQGLAKGLAIGSNGVTFGIWSFM
CYYGSRMVMYHGAQGGTVFAVGASIAVGGLALGAGLPNLKYFSEAMAAGERIMEVIKRVP
KIDSDSVEGEILENVLGEVEFKRVQFAYPSRPESIIFKDFCLTIPAGKTVALVGGSGSGK
STVIALLQRFYAPLGGEIILDGVSIDKLQLKWLRSQMGLVSQEPALFATSIKENILFGKE
DASMEEVIEAAKASNAHNFIRQLPQQYDTQVGERGVQMSGGQKQRIAIARAIIKAPRILL
LDEATSALDSESERVVQEALDKAVVGRTTIIIAHRLSTIRNADVIAVVQDGQVMETGSHD
ELIQVESGLYTSLVRLQTTTPDDNNNATMHSLASKSSNMDMNNTSSRRLSIVSLSSSANS
FAQGRGASQSNEEDIKKLPVPSFRRLVALNAPEWKQATLGCVGATLFGAVQPIYAFAMGS
MISVYFLTDHDEIKKKTSIYAFCFLGLAVFTLVINIIQHYNFAYMGEHLTKRIRERMLSK
ILTFEVGWFDQDENSSGAICSRLAKDANVVRSLVGDRTALLVQTISAVTIAFTMGLFIAW
RLALVMIAVQPLVIICFYARRVLLRSMSNKAIKAQAESSKLAAEAVSNLRTITAFSSQHR
ILKMLEKAQQGPRRESIRQSWYAGIGLAFSQSLASCTWALDFWYGGRLIADGYISSKALF
ETFMILVSTGRVIADAGSMTTDIAKGSDAVGSVFAVMDRYTKIEPEDPEGHQPERITGNI
ELQNVHFAYPARPDVMIFEGFSIKIEAGKSTALVGQSGSGKSTIIGLIERFYDPLKGDVK
IDDRDIRSYHLRSLRRHIALVSQEPTLFAGTIRENIAYGASDEIDESEIVEAAKAANAHD
FIAGLNEGYDTWCGDRGLQLSGGQKQRIAIARAILKNPAVLLLDEATSALDSQSEKVVQE
ALERLMVGRTSVVVAHRLSTIQNSDIIAVLDKGHVAEKGTHQSLLAMGPTGAYYSLVSLQ
RTPQNTTHAANKVLAPLAMESP
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtgaaaaaaaggccagtggtagtagtgaggttacaaagacaaaaaatgggtca
tttcgatccattttcatgcatgcggacggtgtagatatgtttttgatggttttagggtac
atcggagccattggtgatgggttctctacacctttggtgctgtttctaacaaagggatat
tgttggacaagaacaggcgaaaggcaagcaacaaggatgagagcaagatatttgaaagca
gtgttaaggcaagatgtgggttacttcgatttgcatgttacaagcactgcagaggtcatc
acaagcgtttccaatgatagtcttgtgattcaagatgctattagtgaaaagctgccaaac
tttgtgatgaatgcttccttattctttggctgctacttagtggcgttcttgatgctatgg
aggctagcaattgtagggtttccttttgttgtgctgctggtgattcctggattaatgtat
ggaaggactttgatgtcgttagcaagaaagatgagagatgagtacaataaggctggtaca
attgcagaacaagcaatatcttctataagaacagtttatgccttcgttggtgaaagtaaa
accatcaatgaattctcttccgctttacaaggctctgtgcaattggggttaaagcaaggt
ttggctaaaggattggccatcggtagcaatggagttacatttggtatttggtctttcatg
tgttattacggtagcagaatggtcatgtaccatggtgctcaaggagggaccgtttttgcc
gttggcgcctccattgccgtggggggcctagcattaggagctggattaccgaacttgaag
tacttctctgaagcaatggcagccggagaacgaataatggaggtgataaaaagggttccc
aagatagactcagatagcgtggaaggtgaaattttggaaaatgttttgggtgaagttgaa
ttcaagcgcgtacaatttgcatacccatcaagacctgaaagcataatctttaaagacttt
tgcctaacaattccagcaggaaagactgtggcattagttggtggtagtggctcgggaaaa
tcaacagtaatagcattattacaaagattttatgcaccacttgggggagaaataattttg
gatggagtttctatcgataagttacagctcaaatggctaaggtcacaaatgggtttggta
agccaagagccagcactatttgccacatcaattaaggaaaatatactttttggcaaggaa
gatgcttcaatggaagaggtcattgaagcagcaaaagcatcaaatgctcataatttcatc
cgtcagttgcctcaacaatatgatacccaggttggtgagagaggagtccaaatgtcaggg
ggccaaaagcagagaatagcaattgcaagagcaataatcaaggcaccgagaatccttctc
ttagacgaggcaacaagtgcacttgactctgaatccgaacgcgttgtccaagaagcctta
gacaaggccgtcgttggccggaccacaatcatcatcgcccaccggctctccactatccgt
aatgccgatgtcatcgccgtggtccaagatgggcaagtcatggaaacaggatcccatgat
gagctcatacaagtcgaaagtggcctttacacttcacttgttcgtcttcagacaacaacc
ccagacgacaacaataatgcaaccatgcacagcttggcttctaaatcatcaaatatggac
atgaacaacacaagcagccggagactttcaattgtcagtctttcaagttcagccaattca
tttgctcagggccgaggcgcttcacaaagcaatgaagaggacatcaagaaattgcctgtg
ccatcattcaggagattggtagctttgaatgcgccagaatggaaacaagcaacattgggt
tgtgttggtgcaactttatttggtgcagtgcagccaatttatgcatttgccatggggtct
atgatatcagtgtatttcttgacagatcatgatgagattaaaaagaagacaagtatttat
gctttttgtttccttgggcttgcggtatttactcttgtgattaacattatccagcattac
aattttgcttacatgggtgagcacttgactaagaggatcagggagaggatgctttcaaag
attctcacttttgaagttggttggtttgatcaagatgagaattcaagtggtgccatttgc
tctcgacttgcaaaggatgccaatgtggtgaggtctttggtgggtgatcgtacggctctg
cttgtacagacgatttctgcggtaaccatagctttcacaatgggcctattcattgcctgg
aggcttgcattggtgatgattgcagttcagcctctagtcattatatgcttctacgctaga
cgggtactgcttaggagcatgtcaaacaaggccataaaagcccaagccgaaagcagcaag
cttgctgccgaagctgtgtctaatctcagaaccatcactgcgttttcctcccaacacaga
atcctgaaaatgctcgagaaggcccagcagggcccgcgaagagagagtatacgacagtca
tggtatgcaggtataggccttgccttttcccagagcctagcatcatgcacttgggctctg
gacttctggtacgggggcaggctcattgcggatggatacatcagctctaaagcccttttt
gaaaccttcatgatccttgttagtacggggcgggtcatcgcggatgcaggtagcatgact
acggacattgccaaaggctcagatgccgtagggtcggtttttgctgtaatggaccgatac
acgaaaattgagcccgaagatcctgaaggacaccagcccgaaaggataacaggcaatatc
gaacttcagaatgtccatttcgcataccctgctagacctgatgtgatgatcttcgaaggc
ttctcaatcaaaattgaagctggaaaatcaacggcattggtgggacaaagtgggtctggg
aaatcgaccatcattggcttgatcgaacggttttatgaccctttaaagggtgatgtgaaa
attgatgatcgcgacatcagatcataccatcttaggtcactaaggagacatattgcactt
gttagtcaagagccgactctgtttgcagggactattagagaaaacatcgcatacggagca
tcagatgaaatcgatgaatcagagatcgttgaagcagcaaaggcagccaatgcacatgat
tttattgctggattgaacgaaggttatgacacgtggtgcggagacaggggattgcagcta
tccggaggccaaaagcagcgcattgcaatagctcgtgccatattgaaaaatcccgcagtc
ttgttgctggatgaagcgaccagcgcacttgatagtcagtcagagaaagttgtacaagaa
gcacttgagcgtttgatggtggggagaacaagtgtggtggtagcacacaggttaagtacc
attcaaaattctgatataattgcagtgttagataaaggccacgtggcagagaaagggacc
caccaatctttgttggcaatgggacccacaggagcttactattcattggtcagcctccag
aggacacctcaaaatactactcacgcagccaacaaagtattggctccactggcaatggag
tctccttaa
DBGET
integrated database retrieval system
