Citrus x clementina (clementine): CICLE_v10010961mg
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Entry
CICLE_v10010961mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CICLE_v10010961mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v10010961mg
03012 Translation factors [BR:
cic03012
]
CICLE_v10010961mg
Enzymes [BR:
cic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CICLE_v10010961mg
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
CICLE_v10010961mg
Translation factors [BR:
cic03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
CICLE_v10010961mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
nSTAND3
AAA_19
Rad17
T2SSE
Cas3-like_C_2
ATPase
Motif
Other DBs
NCBI-GeneID:
18038008
NCBI-ProteinID:
XP_006430051
UniProt:
V4T1C2
LinkDB
All DBs
Position
Unknown
AA seq
908 aa
AA seq
DB search
MSPRFLGATNSIFSRSKHLLVVAAPITRPRVLSTSPVSFPLKTAKPPVMSYRPNYQGGQR
RGGGGPSTSGRGGRRGGRGGGGGRGGGGGGRGEQRWWDPVWRAERLRQQAAEMEVFDENE
WWGKLEQMKRGEEQEMIIKRKFSRADQQTLADMAHQLGLHFHAYDKGKALAVSKVPLPMY
RPDLDERHGSTEKELQMSKETERRVGNLLNSSQGNVPVNDSGIESSEAARQPKLSVKVAN
TISPPQSDSAKERLNVILKERQEKLKSSDSGKAMLSFREKLPAFKMKAEFLKAVAENQVL
VVSGETGCGKTTQLPQFILEEELSSLRGADCNIICTQPRRISAISVAARVSSERGENLGE
TVGYQIRLESKRSAQTRLLFCTTGVLLRQLVEDPDLSCVSHLLVDEIHERGMNEDFLLII
LRDLLPRRPDLRLILMSATINADLFSKYFGNAPTVHIPGLTFPVTDLFLEDVLEKTRYKM
NSKLDSFLGNSRRSRRQDSKKDHLTALFEDVDIDSNYKNYSASTRASLEAWSAEQIDLGL
VESTIEYICRHEGDGAILVFLTGWNDISKLLDQIKVNKFLGDPNKFLVLPLHGSMPTINQ
REIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISK
ASAHQRRGRAGRVQPGVCYKLYPRIIHDAMLPYQLPEILRTPLQELCLHIKSLQLGTVGS
FLSKALQPPDPLAVQNAIELLKTIGALDDMENLTPLGRHLCTLPVDPNIGKMLLMGAIFQ
CLNPALTIAAALAHRNPFVLPVNMQKEVDEAKRSFAGDSCSDHIALLKAFDGYKDAKRNR
RERDFCWENFLSPITLLMMEDMRSQFLDLLSDIGFVDKSKGPSVRSYIFYYYHKLSIPSP
LLSLLVVV
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgcgctttctcggcgccactaacagcattttctcgcgctcgaaacacctcctc
gtcgtagccgcgcccataacaagaccacgagtactctccacatctccagtttcctttccg
cttaaaaccgcaaaaccacctgtcatgtcataccgtcctaattaccaaggcggacagcgc
cgcggaggcggaggcccttccacatccggtcgcggtgggcgacgtggtggacgcggaggc
ggcggaggtcgcggcggcggtggaggaggtcgtggcgagcagcgttggtgggaccccgtc
tggcgtgccgagcgcttgaggcagcaagccgctgagatggaagtttttgatgagaatgaa
tggtggggtaagttggagcagatgaaacgtggggaagagcaagagatgataataaagcgg
aagtttagtcgtgcggatcagcaaaccctggctgatatggctcatcaattgggtcttcac
ttccatgcatatgataaggggaaggccttggcagtcagcaaagttccactgccaatgtat
cgaccagatctagatgaacgtcatggatcaacggagaaagagcttcaaatgtccaaagaa
actgagaggagagttggaaaccttctgaatagctcgcaggggaatgtacctgttaatgat
tctggcatagagtctagtgaagcagccagacaaccaaagcttagtgtaaaagtagctaat
actatctccccaccacagtccgattctgcaaaagagagacttaatgtcatacttaaggag
aggcaggagaaattgaagtcgagtgatagtgggaaggctatgctatctttcagagaaaag
cttcctgcattcaaaatgaaagctgagtttcttaaagctgttgcggagaatcaggtattg
gtagtttcaggagagacagggtgtggaaaaacaacacagcttcctcaatttattttggaa
gaggagttatctagtttgcgtggtgctgactgcaacataatatgcacacaaccccgtcgt
atatctgccatatctgtagcagctcgagtatcctcagaaagaggagagaatctcggcgaa
actgttggttatcagattcgtctggagtcaaagcgctctgctcaaacacggctcctcttt
tgcaccactggagtattacttcggcagttggttgaggacccagatttaagttgtgtgagc
catttgctggttgatgaaattcacgaaagagggatgaatgaggactttttgttaataatt
ctgcgtgacctacttcctcgacgtcccgatctgcgtcttatcctaatgagtgctacaatt
aatgctgatctgttttccaaatactttgggaatgccccaacagtacatataccgggattg
acttttcctgtgacagatttatttctagaggatgttttggagaaaactcgttataaaatg
aattcaaagttggacagctttctgggtaactcaagaagaagtagacggcaagattcaaag
aaagatcacttaaccgcattatttgaggatgttgatattgattcaaactataagaattac
agtgcatctactagagcatctcttgaagcttggtcagctgaacagattgatttgggtctg
gtggagtcaacaatagaatatatttgtcgccatgaaggcgatggagcaattcttgtattc
ctcacgggctggaatgacatttccaaactactcgaccagattaaggtaaacaaatttctt
ggagatcctaataagtttctagttcttccactacatgggtcaatgcctaccatcaaccaa
cgtgaaatatttgaccgtcctccgccaaacaagagaaaaattgttctggcgaccaatatt
gcagagagtagtatcaccatagatgatgttgtgtatgttgtggactgtggaaaggcaaag
gaaaccagttatgatgctctaaacaagttggcttgtctattaccatcatggatttcaaag
gcctcagctcatcagagaaggggtcgtgctggccgtgtgcaacctggtgtttgttataaa
ttgtatccaagaattatccatgatgcaatgcttccctatcagttacctgaaattttacgg
acacctttacaagaactctgtctgcatattaaaagcttgcagcttggaactgttgggtca
tttttgtccaaggctcttcagccaccagatcctctggctgttcaaaatgcaattgaactt
ctcaaaacaattggggctttagatgatatggagaatcttactccgcttggtcgccatctt
tgcactctgcctgtggaccccaacattggaaagatgcttctaatgggagctatctttcaa
tgcctcaatcctgctttaacaattgcagctgctcttgcgcatcgcaacccatttgttctt
ccagtaaatatgcagaaggaggttgatgaagcaaagagatcctttgctggtgattcttgc
agtgatcacatagcacttctcaaagcttttgatggatataaggatgcaaaacgtaatcga
agggaaagagacttctgttgggaaaattttttatctccaataaccttgctgatgatggag
gatatgagaagccagtttctggatctgctatcagacataggctttgtagacaaatccaag
ggtcctagtgtaagatcttacattttctattattaccacaaactctccattccctctcct
ctcctgtctcttttggtggtggtttag
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integrated database retrieval system
