Citrus x clementina (clementine): CICLE_v10010990mg
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Entry
CICLE_v10010990mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CICLE_v10010990mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cic03400
]
CICLE_v10010990mg
DNA repair and recombination proteins [BR:
cic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
CICLE_v10010990mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
18038328
NCBI-ProteinID:
XP_006430573
UniProt:
V4S8H7
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MRTRQDSKTQKDQASGKESTVRGALRDSESSHNETGTLAETSREGVGKFLRRVNARSSSR
SKKQDCAVGLPTSVLKVSGKQEVDKRVTWSDVDAHGCSRDAMGNTLREVDEGRLQDNVLD
GGEEMYDSDWEDGSIPVACSKENHPESDIKGVTIEFDAADSVTKKPVRRASAEDKELAEL
VHKVHLLCLLARGRLIDSVCDDPLIQASLLSLLPSYLLKISEVSKLTANALSPIVSWFHD
NFHVRSSVSTRRSFHSALAHALESREGTPEEIAALSVALFRALKLTTRFVSILDVASLKP
EADKNVSSNQDSSRVGGGIFNAPTLMVAKPEEVLASPVKSFSCDKKENVCETSSKGLPEC
KYSSPKSNNTQSKKSPVSCELSSRNLDPSSSMACSDISEACHPKEKSQALKRKGDLEFEM
QLEMALSATNVATSKSNICSDVKDLNSNSSTVLSVKRLKKIESGESSTSCLGISTAVGSR
KVGAPLYWAEVYCSGENLTGKWVHVDAANAIIDGEQKVEAAAAACKTSLRYIVAFAGCGA
KDVTRRYCMKWYRIAPKRVNSAWWDAVLAPLRELESGATGGMTQMEKRHVNASNILEALK
TSNYPYRDSFPNHVSLYGDSDLNVESSAKDSFVADRNSLEDMELETRALTEPLPTNQQAY
KNHQLYVIERWLNKYQILYPKGPILGFCSGHAVYPRSCVQTLKTKERWLREALQVKANEV
PVKVIKNSSKSKKGQDFEPEDYDEVDARGNIELYGKWQLEPLRLPSAVNGIVPRNERGQV
DVWSEKCLPPGTVHLRLPRVYSVAKRLEIDSAPAMVGFEFRNGRSTPVFDGIVVCAEFKD
TILEAYAEEEEKREAEEKKRREAQATSRWYQLLSSIVTRQRLNNCYGNNSTSQSSSNFQN
VKKTNSNVGVDSSQNDWQSPNQVDRGDTKLHAPSPFQSEEHEHVYLIEDQSFDEENSVTT
KRCHCGFTIQVEEL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgcggaccagacaagattctaagacgcagaaagatcaagcttcagggaaggagagtaca
gttagaggggcactgcgtgattcagaaagtagccacaatgagactggaacacttgctgag
acatcacgagaaggagttggtaaatttcttagacgtgtcaacgctcgtagctcatcacgt
agtaagaaacaagattgtgctgttggcttgcctacgagtgtgttaaaagtaagtgggaaa
caagaggtggataaaagagttacttggagtgatgtagatgctcatgggtgtagcagagat
gcaatgggaaacacgttaagggaggtcgatgagggaagacttcaggacaatgttttggat
ggtggggaggaaatgtacgattcagattgggaagatggatcaattcctgttgcatgttcc
aaagaaaatcatccagaaagtgacattaagggtgtcacgattgaatttgatgcagctgat
tctgttacaaagaagcctgttcgccgagcttctgcagaagataaggaattggctgagctc
gtgcacaaggttcatttactctgcttacttgcaaggggcaggttaattgattctgtttgc
gatgatcctcttattcaggcttctctactttctcttctgccatcatacttgttgaaaata
tccgaagtctcaaaactcacagccaatgccttatctcctattgtcagttggttccatgac
aactttcatgttagaagctcggttagtaccaggagatcatttcattcagctttggcccat
gctcttgaaagtcgtgaaggcaccccggaggagatagcagcattatctgtggcattgttt
agagctttgaagctaacaacccgatttgtctccattttggatgttgcatccttgaaacct
gaggctgacaaaaatgtttcttcaaatcaagatagtagcagagtaggtgggggaatattc
aatgctccaacactcatggttgccaaaccagaagaggttttggcatctcctgttaaatca
ttttcatgcgacaaaaaggagaatgtatgtgaaacttcttcaaagggtttgcctgaatgt
aagtatagcagtccaaaaagcaacaacactcaatctaaaaaatctcctgtttcctgtgag
ttgagtagtagaaatttggatccatcatcttccatggcatgtagtgatatctctgaagca
tgtcatcctaaggaaaaatctcaggctttgaaaaggaaaggggatcttgagttcgagatg
cagttggaaatggctctttctgcaacaaatgttgccactagtaaaagcaacatatgttca
gatgtgaaggacttgaatagtaattcctcaactgtcctttcagttaagagactgaaaaaa
attgaaagcggagaatcttcaacttcttgcctgggaatatcaacagcagttggatcaaga
aaagtaggagctccactgtattgggcagaagtatactgcagtggtgagaacttgacagga
aaatgggtgcatgttgatgctgccaatgcaatcatcgatggggagcagaaggtagaagct
gcagcagctgcatgcaaaacatctttaagatatatagttgcttttgctggttgtggagct
aaagatgtgacccgcaggtactgtatgaagtggtacaggatagcgccaaaacgagttaat
tctgcttggtgggatgcagttttggctccattgagggagttagagtcgggagcaactgga
ggtatgacccaaatggaaaagagacatgttaatgcctccaatatacttgaagcattgaaa
acatccaattacccgtatcgagatagtttccctaatcatgtcagcttgtatggggattca
gaccttaatgtagagtcttctgcaaaggattcttttgttgctgacaggaattctcttgag
gatatggagttggaaactagggctctaactgagcctctgcctaccaatcaacaggcctat
aaaaaccatcaattatatgttattgaaaggtggcttaataagtatcagatactttatcca
aagggtcccattctgggtttctgttctggacatgccgtttatcctaggagttgtgtccaa
acactcaagacaaaagaaaggtggcttcgggaagcattacaggttaaagctaatgaggtt
cctgtgaaggtaataaaaaattcttcaaaatccaagaaaggacaagattttgaacctgag
gattatgatgaggttgatgctagaggaaatattgaactatatgggaagtggcaattggaa
ccattacgtctcccaagtgctgttaatgggattgtgccaaggaatgagcgtggtcaagtt
gacgtgtggtctgagaaatgccttccaccaggaacagtacacttaaggttgccaagggta
tattctgtggccaagagactggaaattgattctgcacctgccatggttggctttgaattc
agaaatggtcgctctactcctgtctttgatggtattgtggtgtgtgccgagttcaaggat
acaatactagaggcatatgcagaagaagaggagaaaagagaagctgaggagaagaaaaga
agggaagcacaagctacttctaggtggtatcagcttctgtcatccattgtaactcgacaa
aggttaaacaactgctatgggaacaattcaacttcacaatcatccagcaatttccaaaac
gtgaagaaaactaattcaaatgttggggttgacagtagtcagaatgattggcaatctcca
aaccaagtagatagaggtgacactaaattgcatgctccttctcccttccaatcagaggag
catgaacatgtatatttgatagaggatcaaagttttgatgaggagaactctgtaacaacg
aagcgatgtcattgtggcttcacaatccaagtggaggagttatag
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