Citrus x clementina (clementine): CICLE_v10011020mg
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Entry
CICLE_v10011020mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K12830
splicing factor 3B subunit 3
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CICLE_v10011020mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cic03021
]
CICLE_v10011020mg
03041 Spliceosome [BR:
cic03041
]
CICLE_v10011020mg
03036 Chromosome and associated proteins [BR:
cic03036
]
CICLE_v10011020mg
Transcription machinery [BR:
cic03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
CICLE_v10011020mg
Spliceosome [BR:
cic03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
CICLE_v10011020mg
Complex B
CICLE_v10011020mg
Complex C
U2 SnRNP specific factors
CICLE_v10011020mg
Chromosome and associated proteins [BR:
cic03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
CICLE_v10011020mg
TFTC complex
CICLE_v10011020mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
Beta-prop_RSE1_1st
Motif
Other DBs
NCBI-GeneID:
18038987
NCBI-ProteinID:
XP_006429954
UniProt:
V4UU81
LinkDB
All DBs
Position
Unknown
AA seq
926 aa
AA seq
DB search
MAVSEEVCSTAKSRSSPSSSSAPAPPPRNIHYLAKCVLKGSVVLQVAHGHLRSPTSNDVV
FGKETSIELVIIGEDGIVQSVCEQAVFGTIKDLAVVPWNDKFNAQNSQVMGKDLLVVISD
SGKLSFLAFCNEMHRFFPVAQVHLSNPGNSRHQLGRMLAVDSSGCFIAVSAYEDRLGLFS
LSMSSGSDIIDKKICYPSESEVDTSASRIAQKNRISGTIWSMCFISTDPRQPSKEHNPIL
AIILNRRGALLNELLLVGWNIREHAISVLSCFFEAGPLAHSVVEVPRSYGFAFVFRIGDA
LLMDLRDPHNPSCVYRTSLNFLPPALEEQNFVDESCRVHDVDDEGLFNVAACALLELRDY
DPMCIDSDSGNAKEPSKHVCSWSWEPETDKIPKMVFCVDTGEFFMIEIAFGSDGLKVHLS
ECLYKGPPCKAILWVEGRFLSAFVEMGDGMVLKEENGRLVYTSPIQNIAPILDMSVVDYH
DEKRDQMFACCGVAPEGSLRIIRSGISLEKLLRTAPIYQGITGTWTVRMKVSDPYHSFLV
LSFVEETRVLRVGLNFTDVTDSVGFRPDVCTLACGLVADGLLVQIHQNAVRLCIPTMVAH
SGGIPLSYPVCTSWFPEHVSISLGAVAHNMIIVSTSNPCFLFILGVRSLSVSHYEIYEMQ
HMRLQSELSCISIPQKHPERRKSSSPISLVSNSSVPTLPAGVIIGYTFVIGTHRPSVEVL
SFVPKEGLRVLASGSIVLTNTMGTAISGCIPQDVRLVLADQFYVLAGLRNGMLLRFEWPP
DSNIPSSVVPIHSPISATFRSTENIRSGIAATSSFGSEMSAFNLTEESKDELPINLQLIA
TRHIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLAYTSISFQPSTHATPVCSVEC
PKGILFVAENSLNLFYFWMLYNLGGK
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttcggaggaagtgtgctcgacggcgaagtcgcgatcgtcaccgtcttcatcg
tcggcccccgcgccgcctcctcggaacattcattaccttgccaaatgcgttcttaaagga
agcgtcgttcttcaggtcgcccacgggcatctccgctctccgacctccaacgacgtcgta
ttcggcaaggagacgtcaatagagttagtaataattggtgaagatgggattgtacaatca
gtttgtgagcaggctgtatttggcacaattaaggaccttgctgttgtaccttggaacgac
aagttcaatgctcagaattcgcaggtgatggggaaagaccttctggttgttatttctgat
tcggggaagctctcatttctcgctttttgcaatgaaatgcacaggtttttcccggtggca
caggttcatctttcaaatccaggaaactcaaggcatcaacttggaagaatgctggcggtc
gattccagtggctgcttcattgctgttagtgcatatgaagatcgattgggtttgttttcc
ctctcaatgtcttctggaagtgatattattgataagaaaatatgttatccttctgaaagt
gaagtggacacatctgcttccagaattgcccaaaaaaacagaataagtggtacaatatgg
agcatgtgctttatttcaaccgatcctcgtcaaccaagtaaggagcataatcccatacta
gccattattctgaataggagaggggcgctcttgaacgaattgctgctagtgggatggaat
attagggaacatgctataagtgtgctttcatgtttttttgaagctgggccactggcacat
agtgttgttgaagttccacgttcttatggatttgcctttgtgttcaggattggtgatgca
ttattaatggatcttagagatcctcacaatccctcttgcgtttatagaacaagcctgaac
tttttaccccctgctctagaggaacaaaattttgttgacgagtcttgtagagtacatgat
gttgatgatgaaggtttgttcaatgttgcagcatgtgctttattggagctacgcgattat
gatcccatgtgtatagatagtgacagtggcaatgcaaaagagccctccaaacatgtgtgc
tcgtggagttgggaaccagaaactgataagattccaaagatggtgttttgtgtagataca
ggtgagttttttatgattgaaattgcttttggttctgatggccttaaagttcatctgtca
gaatgtctttacaaaggcccaccatgcaaggcaattttgtgggttgaagggaggttcctg
tctgcatttgtagaaatgggggatggaatggtcttgaaagaagaaaatggaagattagta
tacacaagtcccattcaaaacattgcaccgatattagacatgtcagttgtggattaccat
gatgaaaaacgtgatcaaatgtttgcatgctgtggagtggcaccagagggatcattaagg
attattcggagtggtataagtttagaaaaactattgagaactgcccctatatatcagggg
attactggtacttggacagttcggatgaaagtatctgatccatatcattcttttcttgta
ctatcatttgttgaagagaccagggtgctaagagtaggcctaaactttactgatgtgact
gattctgttggtttccggcctgatgtctgtactttggcatgtgggcttgtcgctgatggt
ttgctggttcagattcaccaaaatgctgttaggctttgtataccaaccatggttgcccat
tctgggggtatcccgttgtcatatccagtttgtacatcttggttcccagaacacgtaagc
atcagtttgggggcagttgctcataatatgataattgtttctacttctaatccatgcttc
ctatttattcttggggtcagatcactctcagtgagtcattatgaaatatatgagatgcaa
catatgagattgcagagtgagttatcatgcatttccatacctcaaaaacatcctgagcga
agaaaatcaagttctcccatcagtcttgtgagtaatagcagtgtgcctacacttccagct
ggagttatcattggttatacctttgttattggcacacataggccttcagtggaagttctt
tcatttgtacccaaggaagggttgagagttcttgcttctgggtcaattgtgttgacaaat
actatgggaactgctattagtggctgcattcctcaagatgtgagacttgtgttggctgat
cagttttatgttcttgcggggttgaggaatggaatgctccttcggtttgagtggcctcct
gactctaatataccttcatctgtcgtacccattcacagtcctattagtgccactttcaga
agtacagagaatattcgatcaggtatagcggctactagttcttttggttcagaaatgtct
gcttttaatttaactgaagagtccaaagatgagcttccgattaatcttcaattgattgcc
acccgtcacattggcatcactcctgttttccttgttcctctgagtgactcgcttgacgca
gacatgattgctctcagtgacaggccgtggttgttgcaaactgcaaggcacagcctggct
tatacttctatttcatttcaaccttcaacacatgcgactcctgtgtgttctgttgaatgc
cctaaagggattttatttgttgcagagaacagtctaaatttgttttatttctggatgtta
tacaatctggggggaaagtaa
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