Citrus x clementina (clementine): CICLE_v10011046mg
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Entry
CICLE_v10011046mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cic
Citrus x clementina (clementine)
Pathway
cic04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
CICLE_v10011046mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v10011046mg
03009 Ribosome biogenesis [BR:
cic03009
]
CICLE_v10011046mg
04131 Membrane trafficking [BR:
cic04131
]
CICLE_v10011046mg
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cic04147
]
CICLE_v10011046mg
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
CICLE_v10011046mg
Ribosome biogenesis [BR:
cic03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
CICLE_v10011046mg
Membrane trafficking [BR:
cic04131
]
SNARE
SNARE associated proteins
Others
CICLE_v10011046mg
Autophagy
Aggrephagy
Other aggrephagy associated proteins
CICLE_v10011046mg
Exosome [BR:
cic04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CICLE_v10011046mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_5
AAA_33
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
AAA_28
Mg_chelatase
ATPase_2
AAA_18
Parvo_NS1
IstB_IS21
ABC_tran
AAA_lid_PRS2_C
Viral_helicase1
AAA_7
NACHT
Vps4_C
NB-ARC
AAA_24
TsaE
DUF815
Zeta_toxin
Zot
Motif
Other DBs
NCBI-GeneID:
18038556
NCBI-ProteinID:
XP_006428410
UniProt:
V4SRW7
LinkDB
All DBs
Position
Unknown
AA seq
864 aa
AA seq
DB search
MWIGVGWGGVGWGWGNGATLLYKTPQAIFSDPIHHTKFCFLNSSNHFRYLILFNQLIMSN
QAESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGDTIL
IKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILP
VDDTIEGVTGNLFDAYLKPYFTEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCVVAP
DTEIFCEGEPVRREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPK
GILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPS
IIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRR
FGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAA
LQCIREKMDVIDLEDETIDAEILNSMAVTDEHFKTALGTSNPSALRETVVEVPNVNWEDI
GGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANF
ISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAADR
VLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQIFKA
CLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRSENPEA
MEEDVEDEVAEIKAVHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDAAP
PGADGGSDPFASSAGGADDDDLYS
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgtggattggggtggggtggggtggggtggggtgggggtggggaaacggagccaccctt
ctctataaaacacctcaagccatcttctcagatcccattcatcacacaaaattctgtttt
ctcaattcctctaatcactttcgttatctcattctcttcaatcaactaattatgtctaat
caagctgaatcctctgatgctaaggggacgaagagggactttagtacggccattttggag
cgaaagaaggcaccgaatcgtctcgttgttgatgaagctattaacgatgataactctgtc
gttgttcttcatcccgataccatggagaagctccaattcttccgcggtgacacgatcctc
atcaagggaaagaaaaggaaagataccgtttgtattgcccttgccgacgatacatgtgag
gaaccgaagataagaatgaataaggtcgtgaggtcgaacttgagggttagactcggagat
gttgtttctgtgcaccagtgcgctgatgtcaaatacggaaagcgtgtgcacatattacct
gtggatgacacaattgaaggggttactggaaatctctttgatgcatacttgaaaccttat
ttcacggaagcttatcgaccagtgaggaagggtgatctattccttgttagaggtggaatg
agaagtgtagagttcaaggttattgagactgaccctcctgaatactgtgtggttgcccct
gatactgagatcttctgtgagggagagccagtgagaagggaagatgagaatcgattagat
gaggttggctatgatgatgttggtggggttagaaagcagatggctcagattcgagaatta
gtagaacttccattaaggcacccgcagctctttaagtcaattggtgtgaagccaccgaaa
ggaattttgctttatggacctcctggatctgggaagacactgattgcccgtgccgttgca
aatgaaaccggtgctttcttcttttgtataaatggacctgagatcatgtcaaaattggct
ggtgagagtgaaagcaatcttaggaaagcatttgaggaagcagagaaaaatgcaccatca
attatttttattgatgagatagattcaattgctcctaaacgtgagaagactcatggagaa
gttgagaggagaattgtttcccagcttttgacactcatggatgggctgaaatcacgtgct
catgtgattgttattggggctacaaatcgtcccaacagcattgacccagctttgagaagg
tttggtagatttgatagggaaattgacataggtgtgccagatgaagtcgggcgtcttgag
gttctccgtattcacacaaagaatatgaagctttctgatgatgttgacttggaaagaatt
gcaaaagacacacatggttatgttggtgctgatctagcagctctgtgtactgaggctgca
cttcagtgcatcagggagaagatggatgtgattgacttagaagatgaaaccatagatgct
gagatactcaattctatggcagtgacagatgaacattttaagactgctcttggaacaagc
aatccatctgctctgcgtgaaactgttgttgaagttcccaatgtcaactgggaggatatc
ggtggccttgagaatgttaagagagagcttcaagagactgttcaatatccagtggagcat
cctgagaaatttgagaagtttggcatgtccccatcaaagggagtgcttttctatggtcct
cctggatgtgggaaaacccttctggccaaagctattgccaatgagtgtcaggcaaatttc
attagtgtcaagggtcctgaattgcttacaatgtggtttggagagagtgaagccaatgta
cgagaaattttcgacaaggcccgtcaatcagctccctgcgttctattttttgatgaactt
gattcgattgctacccagagaggaagcagtgttggagatgctggaggtgctgctgatagg
gttttgaaccagcttctgacagagatggatggcatgtccgcaaagaaaactgtcttcatt
attggagccaccaaccgaccagatatcatagatccggcccttctccgtccaggccgtctt
gaccagttgatttatatccctctccctgatgaggaatctcgccttcaaattttcaaggct
tgcttgaggaaatcaccggtgtccaaagatgttgacctcagagctcttgctaagtacacc
caaggctttagtggtgcagatattactgaaatatgccagcgggcttgcaaatatgccatc
cgagagaatatcgagaaagatattgagagggagaggaggagaagtgagaacccagaggca
atggaggaggatgtagaggatgaagtggctgagattaaagctgtgcatttcgaggaatca
atgaagtatgctcgtagaagtgtcagtgatgctgacatacgcaaataccaagcatttgct
caaacattgcagcagtcaagagggtttggaagtgaatttaggtttcctgatgctgctccc
cctggtgctgatggcggatcagatccttttgcgtcttctgcaggtggcgcagatgacgac
gatctttacagttag
DBGET
integrated database retrieval system
