Citrus x clementina (clementine): CICLE_v10011139mg
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Entry
CICLE_v10011139mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CICLE_v10011139mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v10011139mg
Enzymes [BR:
cic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CICLE_v10011139mg
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
CICLE_v10011139mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
KH_DEAH11_1st
Motif
Other DBs
NCBI-GeneID:
18038706
NCBI-ProteinID:
XP_006428722
UniProt:
V4SMR0
LinkDB
All DBs
Position
Unknown
AA seq
732 aa
AA seq
DB search
MGSSNGQRLGITEPISLAGPTDDDLMRTRKLEKYLRDVNLYESQEEAVSREEVLGRLDQI
VKIWVKKISRAKGLNDQLLQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATREEDFF
GELHQMLTEMPEVTELHPVPDAHVPVMKFKFSGVSIDLLYARLSLWVIPEDLDISQDSIL
QNADEQTVRSLNGCRVTDQILRLVPKIQNFRTTLRCMRFWAKRRGVYSNVAGFLGGINWA
LLVARICQLYPNAVPSMLVSRFFRVYTQWRWPNPVLLCAIEEGSLGLQVWDPRRNPKDKY
HLMPIITPAYPCMNSSYNVSTSTLRIMMDEFQRGHEICEAMEKNEADVDWDTLFEPFTFF
EAYKNYLRIDISAENADDLRNWKGWVESRLRQLTLKVNATTLHAWLFAFFTSIKRKQGVP
VGEGEQFDIRLTVKEFKQAVSMYTLRKPGMQISVAHVTRRNLPNFVFPGGVRPSRPSKGT
WDSRRALERKVSSHTKPGADDGRKRKQTDDNVDTHLRNAKCHATMPSSSGEFREGSPIMS
TISSSSINLQFEHMDANELAGSNREKVENNLTDSIRGSRNSVEVSSHNGKVDGPMIGDPR
NKGLSFNSSNSKDAEKLAIEKIMSGPYVADQAFPLELDQLEDDLELKNQAKDFAGSTQNN
SLGSCAVNIAAEATLTSMNGGSSSSALSPNGGLGELEPVELTAPFSNVIPSAPVPQRKPL
IRLNFTSLNKAT
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggggagcagtaacgggcagcgattgggcattacagagcccatatcgttggcaggacca
acggacgatgatttgatgaggacccgcaagcttgaaaagtacttgcgggatgtgaattta
tatgagagtcaagaagaggctgttagtagagaggaagtgcttgggagactagaccagatt
gtgaagatatgggttaagaaaattagccgtgcaaaaggtttgaacgaccaactgcttcaa
gaagcaaatgccaagatatttacctttggttcttatcggcttggggtgcacggtcccggt
gcggatatagacacactttgtgtgggacctaggcatgcaacacgagaagaagacttcttt
ggtgagctacatcaaatgcttacagagatgcctgaagttacagaattgcaccctgtgcct
gatgctcatgttccagttatgaaattcaagttcagtggtgtttccattgatcttctttat
gcaagactctctctttgggttattcctgaagacttagatatttcacaagactcaattctg
cagaatgcagatgaacagacagttcgtagtcttaatggttgtagagttactgaccagatt
ttgcgtttggttccaaaaatacagaatttccgcacgacattgagatgcatgagattttgg
gctaagcgtcgtggtgtttattcaaatgttgcggggtttcttggtggtataaactgggca
ttgcttgttgctcggatatgtcaactatatcctaatgcagtgcccagtatgttggtttct
cggttcttcagggtttatactcagtggcgctggccaaatccagtcttgctttgtgccata
gaggaggggtcacttggtcttcaagtttgggatccgagaagaaatccgaaggacaagtat
catttgatgcctataataactccagcttatccttgcatgaattccagctataatgtgtca
acaagtaccttgcggattatgatggatgaatttcagcgaggacatgaaatttgtgaggct
atggaaaaaaatgaagctgatgttgattgggatacactttttgagcctttcacctttttt
gaagcatataaaaattatctacggatagatatctctgcagaaaatgctgatgatttaaga
aattggaaaggttgggttgagtctcggctccgtcagcttacattgaaggttaatgccaca
actcttcatgcatggctgtttgcatttttcacttctataaagcggaaacaaggagttcct
gttggtgaaggtgaacagtttgatattaggttaactgtgaaggagtttaagcaagctgtc
agcatgtacacgttacggaagcctggaatgcagattagtgttgctcatgttacacgtagg
aacttacctaactttgtatttccgggtggggttcgaccttctcgtccttcaaaaggaact
tgggatagtaggcgggctttggaacgtaaggtgtcaagccatactaaaccaggagcagat
gatggaaggaagagaaaacagacggatgataatgtagatactcacttgagaaatgccaag
tgccatgccacaatgccttcctctagtggggaatttcgtgagggtagccctattatgagc
acgataagttcatcttctataaatttacagtttgaacatatggacgcaaatgagttagcg
ggatcaaatagagaaaaagttgagaataatttgacagacagcataagaggttctagaaat
tcagtggaggtttcctcgcataatggtaaagtagatggacccatgataggtgatcctcgt
aataaaggcctatcatttaattcatcaaactctaaagatgctgaaaagctggcaattgag
aagataatgtctggtccatatgttgctgaccaagcttttccactagaacttgatcagctt
gaagatgatttggaacttaaaaatcaagccaaagattttgcagggagcacacaaaacaac
tctttggggtcttgtgcagtaaatatagcagcagaagcaacactaacatcaatgaatgga
ggcagttcttcctctgctttatccccaaatgggggcttaggggagcttgagcctgtggaa
ctgacagcgcctttctcaaatgtgatcccttctgcacctgtgccgcagcgtaagccgcta
atcaggttgaacttcacttccttgaacaaggcgacgtaa
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