Citrus x clementina (clementine): CICLE_v10011230mg
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Entry
CICLE_v10011230mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic00906
Carotenoid biosynthesis
cic01100
Metabolic pathways
cic01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
CICLE_v10011230mg
Enzymes [BR:
cic01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
CICLE_v10011230mg
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GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
GDI
FAD_oxidored
GIDA
Pyr_redox_2
HI0933_like
Thi4
GMC_oxred_N
FAD_binding_3
MCRA
Motif
Other DBs
NCBI-GeneID:
18038313
NCBI-ProteinID:
XP_006430005
UniProt:
V4SW55
LinkDB
All DBs
Position
Unknown
AA seq
579 aa
AA seq
DB search
MFISCCSLSIPELNFTPSLINHNSQVLIHQNRSKFTALSNKVQSFGQRDAMQLGSSSKPR
IRNCMIQSFEHVNTLPFSDYKFSRMKLFKPRYEKSSLFSGDSLKSSNFNGSTLRSEDLGC
GESERNRDFALMAKTVMSVDNLVEIGGNEGMSRGADDYDAIVIGSGIGGLVAATQLAVKG
ARVLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEMEVIP
DRTTVHFHLPNDLSVRVHREYSDFVAELTSKFPHEKEGVLAFYGECWKIFNALNSLELKS
LEEPIYLFGQFFKRPLECLTLAYYLPQNAGNIARKYIKDPQLLSFIDAECFIVSTINALQ
TPMINASMVLCDRHFGGINYPVGGVGGIAKSLAKGLADKGSEILYKANVTKVILEQGKAV
GVRLSDGREFYAKTIISNATRWDTFGKLLKGEQLPKEEENFQKLYVKAPSFLSIHMGVKA
EVLPPDTDCHHFVLEDDWNRLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTICSIEDWE
GLAQKDYDAKKELVADEIINRLENKLFPGLKQSIAFREV
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgttcatctcttgttgctctctttccatacctgaattaaatttcaccccttcacttata
aaccataattctcaggttttgattcaccaaaataggtcgaagtttactgctttaagtaat
aaagttcagtcctttggtcagcgtgacgctatgcagttgggtagtagcagcaaacccaga
atccgaaattgtatgattcaatcttttgaacatgtaaatactctacctttcagtgattac
aagttcagtaggatgaaactattcaaacccagatatgaaaaaagcagtcttttctctggg
gattcactaaaaagctcaaatttcaatggttccaccctgaggagtgaggatttgggttgt
ggggaaagtgagaggaatagggactttgctttgatggcaaagacagtgatgagtgttgat
aatttggtggagatagggggaaatgaaggaatgagtagaggagctgatgactatgatgca
attgttatagggtcaggtattgggggcttggttgcagctacacagctggcagtgaaggga
gctagggttttggtgttggagaagtatgtgattcctggtggaagctccgggtattatgag
agggatgggtatacttttgatgttggttcttctgtgatgtttgggttcagcgataagggc
aatctaaatttgataacccaagcactggcagctgttggttgtgagatggaggtgatacct
gatcgaaccactgtccatttccacctaccaaatgacctttctgttcgagttcatagagaa
tatagtgattttgttgcagagcttaccagtaaatttcctcatgaaaaggaaggagtcctt
gcattttacggtgaatgttggaagatcttcaatgccttgaactcattggagctgaagtct
cttgaagagccaatctacctttttggacagttctttaagaggcctcttgaatgcttgaca
cttgcctattatctgcctcagaatgctggaaacatagctcgaaagtacataaaggatcca
cagctgttgtccttcatagatgcagagtgctttatagtgagcacaatcaatgctttgcag
acaccaatgatcaatgctagcatggttttatgtgacaggcattttggagggattaactac
cctgttggtggtgtcggtggaatcgcaaagtcattagcaaaaggcctggctgataagggc
agtgaaatactctataaggctaatgtaaccaaagttatacttgagcaaggcaaagctgta
ggagtgagactatcagatggaagggagttttatgccaaaaccataatatccaatgctact
agatgggatacatttgggaagctattaaaaggagaacaacttccaaaagaagaagaaaat
tttcagaaactatatgtcaaggctccttcgtttctttccattcacatgggtgttaaagct
gaggttctgccacctgacacagattgccaccattttgtgcttgaggatgactggaacaga
ctggaggagccttatggaagtatatttttaagcattccaacggttcttgattcatctttg
gctccagaggggcaccatattcttcacatatttacaatttgttccatagaggactgggag
ggactggctcaaaaggactatgatgcaaagaaggagcttgtggcagatgaaataatcaat
agactggagaacaaactgtttccagggcttaaacaatcaattgcttttagggaggtatga
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integrated database retrieval system