Citrus x clementina (clementine): CICLE_v10011266mg
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Entry
CICLE_v10011266mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cic03000
]
CICLE_v10011266mg
03036 Chromosome and associated proteins [BR:
cic03036
]
CICLE_v10011266mg
Transcription factors [BR:
cic03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
CICLE_v10011266mg
Chromosome and associated proteins [BR:
cic03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
CICLE_v10011266mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
SSrecog
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
CDC45
Motif
Other DBs
NCBI-GeneID:
18039832
NCBI-ProteinID:
XP_006431089
UniProt:
V4UX31
LinkDB
All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MTDGPSFNNISLGGRGGTNPGQLKIYSGKISWKKLGGGKAVEVDKVDIAGVTWMKVPRTN
QLGVRTKDGLYYKFTGFRDQDVATLTNFFQSNFGISPEEKQLSVSGRNWGEVDLNGNMLT
FMVGQKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
GDENHPPAQVFRDKIMSMADVGAGGEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN
DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSELLMS
EELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITKPGKFRSAQDGYAVKSSLKAEDG
VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ
RNEYHNLFDFISGKGLKIMNLGDMKTTDGVAAVLQEDDDDAVDPHLERIKNEAGGDESDE
EDSDFVADKDDGGSPTDDSGEEDSDASESGGEKEKPAKKESKKESSSVKASTSKKKSRDG
DEDGKKKKQKKKKDPNAPKRAMSGFIFFSQMERENIKKSNPGIAFTDVGRVLGERWKKMS
VEEREPYESKARADKKRYKDEISGYKNPKPMDIDSGNESDSA
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacggtccctccttcaataatatatcgctcggcggccgaggtggcacgaatcct
gggcagcttaaaatttactcgggaaagatttcatggaagaagctgggaggtggtaaagca
gtggaagttgataaagttgatattgccggggttacatggatgaaagtccctcggacaaat
caacttggtgttcgaaccaaagatgggttgtactacaagttcacaggatttcgtgaccag
gatgttgctactttgaccaattttttccagtccaattttggaatatcacctgaagagaag
caactttctgtcagtggtcgtaattggggagaagttgatttaaatgggaacatgctgact
tttatggttggtcaaaagcaagcttttgaggtatctttagcagatgtctcgcaaacccaa
cttcaagggaaaaatgatgtcatcttggagttccacgtcgatgacacaactggagctaat
gagaaagattcactgatggagataagttttcacatccctaattccaacacgcaattcgtt
ggtgatgagaatcatccacctgctcaagtttttcgtgataaaattatgtcaatggctgat
gttggtgctggaggcgaagaagctgttgttacatttgagggtattgcaatcctcacacca
aggggtcggtatagtgttgaacttcatctttcattcttgcggctccaaggacaagctaat
gatttcaaaattcagtatagcagtgttgtacggctatttttgcttccaaagtctaatcag
cctcatacctttgttgttgttactcttgatccaccaattcgtaaagggcaaaccttgtac
ccgcatattgtcttgcagtttgaaactgactatgtggttcaaagcgagctgttgatgagt
gaagaacttctgaacacaaagtacaaggacaaattagagccatcatacaaggggctcatc
catgaagtgttcaccacaatattgcgtggtctgtctggtgccaaaattaccaaacctgga
aaattccgtagcgctcaagacggttatgcagtgaagtcatcattgaaagctgaagacggt
gtcctgtatccccttgagaagagtttcttctttctgcctaaaccacctactcttatcctt
catgaggaaattgactatgtggaatttgagaggcatgctgctggtggctcaaatatgcat
tactttgatcttcttatcagacttaaaactgaacaagaacatttgtttaggaatatccag
agaaatgaatatcataacctttttgacttcataagtgggaagggcttgaagattatgaac
cttggagacatgaaaaccacagatggggtggctgctgttcttcaggaagacgatgatgat
gcagttgatcctcatcttgagcgaattaagaatgaagctggtggtgatgagagtgatgaa
gaggattcagattttgtagctgataaagacgatggagggtcaccaactgatgattctggg
gaggaggattctgatgctagtgaaagtggaggagagaaagagaaacctgccaaaaaggaa
tcaaagaaagagtcttcatctgtgaaggcatctacttccaagaagaaatccagggatgga
gatgaagatgggaagaagaaaaaacagaaaaagaagaaggatccgaatgcaccaaagagg
gcaatgtctggttttatttttttctctcaaatggaaagagagaatatcaagaaaagtaat
cctggaattgcatttacggatgttggaagagtcctcggagagaggtggaaaaagatgagc
gtggaagagagagagccatatgaatccaaagctcgtgctgataaaaaacgttacaaagat
gaaatcagtggttacaagaatcccaagccgatggatattgactctggaaatgagtctgac
agtgcatag
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