Citrus x clementina (clementine): CICLE_v10011322mg
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Entry
CICLE_v10011322mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v10011322mg
03041 Spliceosome [BR:
cic03041
]
CICLE_v10011322mg
03036 Chromosome and associated proteins [BR:
cic03036
]
CICLE_v10011322mg
Enzymes [BR:
cic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CICLE_v10011322mg
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
CICLE_v10011322mg
mRNA cycle factors
Common to processing body (P body) and stress granule
CICLE_v10011322mg
Spliceosome [BR:
cic03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
CICLE_v10011322mg
Chromosome and associated proteins [BR:
cic03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
CICLE_v10011322mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
18038333
NCBI-ProteinID:
XP_006429937
UniProt:
V4S6V3
LinkDB
All DBs
Position
Unknown
AA seq
606 aa
AA seq
DB search
MSTSWADSVSASENAAPASFNTNSLPRSTYVPPHLRNKQPASFEPPAPSREAHEPASGPR
WGGGSRPDFGRGQGYGSGGRTGGGWNNRSGGWDRRVREVNPFGDDIDAEQPFAEAENTGI
NFDAYEDIPVETSGENVPPPVNTFAEIDLGEELNLNIRRCKYVKPTPVQRHAIPISVAGR
DLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGARTVYPLALILAPTRELSSQIHDEA
KKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRYLAL
DEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPKEIQKLASDFLANYVFLAVG
RVGSSTDLIVQRVEYVHESDKRSHLMDLLHAQVANGVHGKQSLTLVFVETKKGADALEHW
LYMNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFDLPN
DIDDYVHRIGRTGRAGKSGLATAFFNENNLSLARPLAELMQESNQEVPAWLTRYASRANY
GGGKNKRSGGNRFGGRDFRRDGSFTRGTSNDFYSGVNSSSNAYGVPGGGYGGGYGYSNPG
VTSAWD
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgagcacatcatgggctgattcagtctctgcatctgagaatgcagcccctgcttctttt
aacaccaattcattacctcgatccacttatgttccaccgcatctccgtaacaagcaaccg
gcctcctttgaacctcctgctccatcacgggaagctcatgaacctgctagtgggccccgc
tggggcggtggttcaaggcctgattttgggcgtggtcagggttatggttctggtggtaga
actggcggtggttggaataataggagtggggggtgggaccgaagagtacgtgaagtgaac
ccgtttggtgatgacattgatgcagagcagccgtttgctgaagcagaaaacacgggtatc
aattttgatgcttatgaggatattccggtggagacgagtggggaaaatgtgccaccacca
gttaatacatttgcagaaatagatctgggggaagaattgaatcttaatattagaaggtgc
aagtacgtcaaacccactccagttcagcgtcatgcaattcctatatcggttgctggacga
gatttaatggcctgtgctcagacagggtcggggaagacagctgccttttgttttccaatt
attagtgggataatgcgtgagcagtatgtacagagaccacgtggagcacggactgtttat
cctctggctcttattctcgcccctacgagagaactctcatctcagatacatgatgaagcc
aagaagttctcctatcaaactggtgtcaaggtggtggttgcttacggaggagcaccaatc
aaccaacagttgcgagagcttgaaagaggtgttgatattcttgtggctactccaggaaga
ttggttgatctacttgagagagctagagtttcattgcagatgattagatatttagctctc
gatgaggcagatcggatgctggatatgggttttgagcctcaaatcagaaaaatagtgcaa
caaatggatatgcctccgcctggtgtgagacagacgatgcttttcagtgccacgttcccg
aaagagatacagaaactggcgtctgattttctagcaaattacgttttcctggctgttgga
agggttggttcaagcactgatttaattgttcaaagggttgaatacgttcatgagtcagac
aagagaagccatctgatggacctcttgcatgcacaggtggcaaatggagttcatgggaag
caatctttgacattagtttttgtggagacaaagaaaggtgctgatgcgttggaacactgg
ttgtatatgaatgggtttcctgcaactactattcatggggacagaacacaacaggaaagg
gaactagcattgagatcatttaagagtggaaagacaccaattttagtagctactgatgtg
gcggcacgtggtcttgatataccgcatgtagctcatgtagtcaactttgatctccctaat
gacattgatgattatgtacatcggataggaaggacaggacgagctgggaaatcaggattg
gctacagccttttttaacgagaacaatttgtcattggcaaggcctctagctgagctaatg
caagaatctaatcaggaagtacctgcttggcttactcgttacgcatcacgggctaattat
ggcggtggcaaaaataagcgatctggaggaaaccgttttggtggtcgtgacttcagaaga
gacggctcatttactagaggcacatctaatgacttttacagtggagtgaatagtagtagc
aatgcatatggggttccaggtggtggttatggtgggggatatggttacagcaatcctggt
gtgaccagtgcatgggattaa
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integrated database retrieval system
