Citrus x clementina (clementine): CICLE_v10011325mg
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Entry
CICLE_v10011325mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cic03009
]
CICLE_v10011325mg
Ribosome biogenesis [BR:
cic03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
CICLE_v10011325mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
Fer4
AAA_15
AAA_22
Fer4_6
RsgA_GTPase
AAA_29
AAA
AAA_23
Rad17
NACHT
Fer4_2
nSTAND3
Fer4_9
Fer4_21
TsaE
VapE-like_dom
SRP54
Fer4_10
NB-ARC
AAA_33
AAA_5
Fer4_4
ORC-CDC6-like
AAA_24
Fer4_16
NPHP3_N
AAA_7
AAA_19
Fer4_7
T2SSE
Fer4_17
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
18038598
NCBI-ProteinID:
XP_006430898
UniProt:
V4S9I5
LinkDB
All DBs
Position
Unknown
AA seq
584 aa
AA seq
DB search
MSDRLTRIAIVSSDRCKPKKCRQECKKSCPVVKTGKLCIEVTPAAKIAFISEELCIGCGI
CVKKCPFEAIQIINLPKDLDKDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTAL
KILAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILEDNLKVLDQKDERDMKADLC
ADLDLNQVIDRNVGDLSGGELQRFAIAVVAVQNAEIYMFDEPSSYLDVKQRLKAAQVVRS
LLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVTLPFSVREGINIFLAGFVPTEN
LRFRDESLTFRVAETPQESAEEIETYARYKYPTMVKTQGNFKLKVVEGEFTDSQIIVMLG
ENGTGKTTFIRMLAGLLKPDSVEDSDVEIPEFNVSYKPQKISPKFQSTVRHLLHQKIRDS
YTHPQFVSDVMKPLLIEQLMDQEVVNLSGGELQRVALCLCLGKPADIYLIDEPSAYLDSE
QRIVAAKVIKRFILHAKKTAFVVEHDFIMATYLADRVIVYEGQPSVDCVANAPQSLLTGM
NLFLSHLDITFRRDPTNFRPRINKLDSTKDRDQKAAGSYYYLDD
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaccgattgacgcgtatagctattgttagttctgatagatgcaagcccaagaag
tgtcgtcaggagtgtaagaagagttgtcccgttgtcaaaaccgggaagttgtgtattgag
gttactcctgcagctaagattgcctttatctctgaggagttgtgcattggatgtggtatc
tgtgttaagaaatgtccatttgaagcaattcagatcatcaacttgccaaaggatttggat
aaggatacaactcatcgatatggccccaatactttcaaattacataggttgcctgtaccg
aggcctgggcaagttcttggcttagttggaacaaatggtattgggaaatcaactgcactt
aagattttggctgggaagctgaaaccaaatttgggtcgtttcaataaccctcctgattgg
caggaaattttgacctactttcgtggatctgagctgcaaaattattttactcgtattctg
gaagataatttgaaggtgcttgaccaaaaagacgaaagagatatgaaggcggatctttgc
gcggatcttgacctgaatcaagtcatagaccgtaatgttggggatttatctggtggagag
cttcagagatttgccattgctgttgttgctgtacagaatgcagagatatatatgtttgat
gaaccttcaagttatcttgatgttaaacagaggctgaaagcggcccaagttgtccgatct
ttactcaggcctaatagctatgtgattgttgtggagcatgatcttagcgtccttgattac
ctgtcagatttcatttgctgcttatatgggaagcctggtgcttatggcgttgttactctt
cctttctctgttcgagaaggaatcaatattttcttggctggatttgtaccaaccgaaaac
ctacgttttcgtgatgaatctttaacattcagggtcgctgagactccacaagaaagtgct
gaggagattgagacatatgcacgatacaagtaccccaccatggttaagacgcagggaaat
tttaagcttaaggtggttgagggtgaatttaccgactcccagataattgtgatgttggga
gagaatgggacagggaagacaaccttcatcagaatgctggctggtctattgaaacctgat
tctgtggaagattctgacgtggagatacctgagtttaatgtctcgtacaaacctcagaag
atcagtcccaaatttcagtctacagtcagacacttgcttcaccaaaaaatacgtgattca
tatactcatccgcagtttgtgtcagatgtgatgaagcctcttctcattgaacaattgatg
gatcaagaagttgtgaatctttctggtggagaattgcagagagttgcgctatgcctctgc
cttggcaagccagcggacatttatttaattgatgaacctagtgcatatctcgattctgag
cagcgtattgttgctgcaaaagtcattaagaggtttatccttcatgcgaagaaaacagca
tttgtcgtcgagcatgattttataatggctacttatctggcggatagagttattgtgtat
gagggacagccgtcagtggattgtgttgcaaatgctcctcaatcattgttgactggaatg
aatcttttcttatcccatctagatataacatttaggcgggatccaacaaatttccgaccg
agaatcaacaaattggactccactaaggacagggatcaaaaagctgctgggtcatactat
tacctggatgattaa
DBGET
integrated database retrieval system