Citrus x clementina (clementine): CICLE_v10012000mg
Help
Entry
CICLE_v10012000mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cic04131
]
CICLE_v10012000mg
04121 Ubiquitin system [BR:
cic04121
]
CICLE_v10012000mg
Enzymes [BR:
cic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
CICLE_v10012000mg
Membrane trafficking [BR:
cic04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
CICLE_v10012000mg
Ubiquitin system [BR:
cic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
CICLE_v10012000mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
Rad50_zn_hook
zf-HC5HC2H
zf-HC5HC2H_2
DUF7573
HypA
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
18039427
NCBI-ProteinID:
XP_006429129
UniProt:
V4US41
LinkDB
All DBs
Position
Unknown
AA seq
353 aa
AA seq
DB search
MSSIGLSYWCYRCNRIIRIQARTEDAIVCPDCHTGFIEQIETIRRPSNERYPAAEMYLDD
TQNPETFPTTRFGRTRRNGGDRSPFNPVIVLRGPRTPDSGGGNEGTAMERGNFELFYDDA
TGAGLRPLPASMSDFLMGSGFDRVLDQLTQLDFNGVTRFVNPPASKAAIESMPVVTIAES
HVAKESHCAVCKEPFQLNSEAREMPCKHIYHGECILPWLSMRNSCPLCRRELPNEANDRG
SNVGGGPDETLGLTIWRLPGGGFAVGRFNGSRRAAERELPVVFTEMDGGFNAPIGAPRRI
SWVPSRRRAREGNGFARAFRGFTSLLGRIRLPTSRATAEFNRRSPFLDVIYGL
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaatcggattgtcgtactggtgctaccgctgcaaccggatcatccggattcag
gccaggaccgaagacgcaatcgtttgccccgattgccataccggcttcatcgaacagatt
gaaaccattcggcgaccttcgaacgagagatatcccgccgccgaaatgtacttagacgac
acccaaaacccggagacattcccgaccacgaggtttggtcggactcggagaaacggcgga
gaccgatcccctttcaaccctgtcatcgtcctccgtgggccccggacccctgattcaggc
ggtggaaatgaaggaactgccatggagagaggaaacttcgagcttttttatgacgacgct
accggggcgggtcttaggccattacccgcgagcatgtcggattttttgatgggttcgggt
tttgaccgggtcctcgaccagttaacacagttagattttaacggggtgacgaggttcgtg
aaccctccggcttcaaaggctgcgatcgagtcaatgccggtggtcacaattgcagaaagc
cacgtggcgaaggaatcgcactgtgccgtttgtaaagagccattccagctcaattcggag
gctcgtgagatgccgtgtaagcacatttatcatggtgaatgtattctcccttggctttcg
atgcgcaactcgtgcccattgtgccggcgcgagttgccgaatgaagcaaatgacagaggc
agcaatgtcggaggtggccccgatgagacgctggggttaacaatttggaggttgcccggt
ggcgggttcgctgtagggaggttcaatggcagcagaagagccgccgagagagagctaccc
gttgtttttaccgaaatggatggtgggttcaatgctccaatcggggctccacggcggatt
tcatgggtgcccagcagaagaagggcaagggagggcaatggatttgctcgtgcttttagg
ggttttacttcacttttgggaaggattaggcttcccacttcgcgggcaactgctgagttt
aatcggagaagtccatttttagatgttatctatggactgtag
DBGET
integrated database retrieval system
