Citrus x clementina (clementine): CICLE_v10012354mg
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Entry
CICLE_v10012354mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K12881
THO complex subunit 4
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03013
Nucleocytoplasmic transport
cic03015
mRNA surveillance pathway
cic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CICLE_v10012354mg
09122 Translation
03013 Nucleocytoplasmic transport
CICLE_v10012354mg
03015 mRNA surveillance pathway
CICLE_v10012354mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v10012354mg
03041 Spliceosome [BR:
cic03041
]
CICLE_v10012354mg
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
CICLE_v10012354mg
TREX complex
CICLE_v10012354mg
Spliceosome [BR:
cic03041
]
Complex C
Other components
EJC/TREX
CICLE_v10012354mg
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
CICLE_v10012354mg
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_11
RRM_10
RRM_5
Motif
Other DBs
NCBI-GeneID:
18040081
NCBI-ProteinID:
XP_006430579
UniProt:
V4UVU1
LinkDB
All DBs
Position
Unknown
AA seq
206 aa
AA seq
DB search
MATHVDMSLDDIIKSRKKSERERGQGRVRRGRGRGRGPSGSVSGGRMTGAARRGPLSNAR
PSSYTIAKSFRRTRNFPWQHDLFEDSLRAAGISGIEVGTKLYVSNLHPGVTNDDIRELFS
EIGELKRYAIHFDKNGRPSGSAEVVYARRSDAFAALKRYNNVLLDGKPMKIEVVGTNAEI
PLQARVNVTGVNGRRKRTVVMTYVKI
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atggctacgcatgttgacatgtctcttgatgacattataaagagcaggaaaaagagtgag
agagaaagaggacagggcagggtccgccgtggccgtggtcgtggccgtggcccaagtggt
agtgttagtggtggaagaatgacaggggctgctcgtagaggtcctctctccaatgctcga
ccatcatcatataccattgccaagtcttttcgcagaaccaggaactttccctggcagcat
gatttgtttgaggatagccttagggctgcgggaatatctggaatagaagttggcacaaaa
ttatatgtttccaacttgcatcctggagtgaccaatgacgatataagggagcttttctct
gagattggcgagctgaaacgatatgccattcactttgacaagaatggccgccccagtggt
tcagctgaagtggtatatgccagaagaagtgatgcatttgcagctcttaagcgatacaat
aatgtactgttggatggaaaaccgatgaagattgaagttgtgggaactaatgcagaaata
cctctgcaagctcgtgtgaatgtaactggagtaaatggaaggaggaagaggacagtggtg
atgacgtatgtaaagatttaa
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integrated database retrieval system