Citrus x clementina (clementine): CICLE_v10013403mg
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Entry
CICLE_v10013403mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K08775
breast cancer 2 susceptibility protein
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03440
Homologous recombination
cic03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CICLE_v10013403mg
03460 Fanconi anemia pathway
CICLE_v10013403mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cic04121
]
CICLE_v10013403mg
03036 Chromosome and associated proteins [BR:
cic03036
]
CICLE_v10013403mg
03400 DNA repair and recombination proteins [BR:
cic03400
]
CICLE_v10013403mg
Ubiquitin system [BR:
cic04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
CICLE_v10013403mg
Chromosome and associated proteins [BR:
cic03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
CICLE_v10013403mg
DNA repair and recombination proteins [BR:
cic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
CICLE_v10013403mg
FA (Fanconi anemia) pathway
Downstream FA components
CICLE_v10013403mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
18038563
NCBI-ProteinID:
XP_006429488
UniProt:
V4S5L3
LinkDB
All DBs
Position
Unknown
AA seq
1112 aa
AA seq
DB search
MSTWQIFSDADNNFKWQVSGRILQPEPNGSPIQPHSSSFRLPSMSDLLLEGHSKLPENGN
EGADNVSTPMFKTGSGKVVPLKQSSIEKALSVLGTDNDCGISFAGEEHPRENGFGFSNSL
FQTGSGKTVNISSAGLVRAKSLLGLEEGRNDWSFEGLQHTRMTSTPRFEVKEGVKGNVFE
SDTSVLRPSSISKAGFAESRFKNKISSNMMQTEGLNSAPKPPQIKFQTAGGRSLSVSTDA
LQYARNLLGDPELGTFFHEVDVDQLDLTSFKHRRFDDSSSNKENDVFTSFFRLGTAGTKT
ASKNFTSPLRLFSNPVRSRINSENINTSANLIEKFDAVDHDGVSGLNGKIPSVKKPIRST
HGHKAIMDNSVEDDIGSKINSLGRSSGKPLADITNSTSTACANIKQTCEKKRLLRSSISP
FKRPRISKFSTPLRTNLSSPNGLSTLSSEQSGCKKKVLSRYPYQIPRMSMKEYFGMPPSA
QGMLDHLQDQVRQMKSHNADKYMFHDASGLNCIGAEALFNMLAQSGASTQYASKLWVSNH
YKWIVWKLACYERCYLAKSAGKFLTVFNVLEELKYRYEREVNNGHRSAIKRILEGDALPS
SMMVLCISAIHMNCVPKIETHPEAQHGAENSYAAKLELTDGWYSVDAFLDVLLSKHLAAG
KLFVGQKLRIWGAILCGWVGPVSPLEASGSISLQLNINGTYRAHWADRLGFCKGFGAPLA
FRCIKSNGGPVPRTLVGVTRIYPVLYKERLSDGRSIVRSERMECKVMQLYQHRQSMVVEG
IVSEFQRGNKDSHILNDSNSEGAKLFKMLETVAEPEVIMAEMSPEQLTSFATYQAKLEAT
RQSNMERSIEKALENAGLRERDVTPFMRVRVVGLTGKNYQGKGSSREGIITIWNPAEKQQ
CELVEGQAYAILGLVPMNSDSNTLYLQARGSTTKWQPLSPLATEHFKPFFSPRRSVLISN
LGEVPLSSEFDIAAFVVHVGDVYEDSQQKKQWIFVTDGSMLELQLEDLSKSLLAISISSP
YIDDDSFSPINYNLVGSTVGFCNLIKRPKDHLNHIWVAEATENSSYFLSFDFPTCSHLRS
AAASAQSWAKISSLIIDKLKENVLFIIGDRKC
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgtggcagatattctccgacgccgataacaattttaaatggcaggtatccggt
aggatactccagccggaaccaaatggttccccaattcagccgcacagctcgagtttccgt
ctcccttccatgtccgatctcttgcttgaagggcactcgaagcttccagaaaacggaaac
gaaggagctgataatgttagtactccgatgtttaaaaccggttcgggcaaagtggtgccg
ttgaagcagtcttcgattgagaaagcgttatctgttctcggcactgacaatgactgtggc
atttcgtttgctggtgaagagcacccgagggaaaatggatttggcttctccaattctctt
ttccagacaggttctggaaaaactgttaacatatcctctgctggtttggttagagcaaaa
tcattgttgggactggaagaagggcgtaatgattggagttttgaaggccttcaacataca
aggatgacatcaactccccgttttgaagtgaaagagggagtgaagggtaatgtatttgag
agtgatacatcagttctaaggccttcatcaattagtaaggctggttttgccgaaagtaga
ttcaagaacaagataagttcaaacatgatgcaaacggaagggcttaattctgcacccaaa
ccgcctcagattaagttccaaactgcaggaggaagatctttatctgtctccactgatgca
ttgcagtatgcaaggaaccttcttggtgatcctgagttagggacattctttcacgaagta
gatgtggatcaattggatcttacatcttttaaacacagaagatttgatgattcttcttca
aacaaggaaaatgatgttttcacttcctttttccgtctaggaacagcagggaccaaaaca
gcatcaaaaaatttcacatctcctttacggttgttttcaaaccctgtgaggtcgcggatc
aattcagaaaatataaacacgtctgctaacttgattgagaaatttgatgcagttgaccat
gatggagtcagtgggttgaatggtaaaattccttccgtaaagaagcccataagaagcaca
catggccataaagccataatggacaactcagtggaagatgatattggttcaaaaattaat
tcacttgggaggtcatctggtaagcctttggctgatattacaaatagtaccagcacagct
tgtgcaaatattaagcaaacttgtgaaaagaagagactattgagaagttctatttctcca
ttcaagaggccccgtatctccaaattctccaccccgttgagaacaaatctttcttcacct
aatggtttatctactttatcatcagaacaatctggttgcaaaaaaaaagttctctctaga
tatccatatcagattcctagaatgtccatgaaggaatattttggaatgcctccatcagcc
caaggcatgttggatcatttgcaagatcaagtaagacagatgaaatctcataatgcagat
aaatacatgtttcatgatgcatctggcttaaattgcattggagcagaggctcttttcaat
atgttagcgcaatctggagcttctacgcaatatgcctctaaactatgggtgtcaaatcac
tataagtggatagtctggaaactggcatgctatgaaagatgctacttagccaagtctgct
ggcaaatttttgactgttttcaatgtgcttgaagaattgaagtatagatatgagagagaa
gtaaataatggccatcgatctgcaattaagcgaatcctggaaggggatgcattgccttcc
tcaatgatggtgctatgcatttcagccattcacatgaattgtgtaccgaagattgagact
catcctgaggcacaacatggggctgaaaatagctatgctgcaaagctggaactgactgat
gggtggtattcagttgatgcttttttggatgtattgctgtcgaagcaccttgcagctggg
aaactttttgtgggacagaaactcaggatctggggagcaatattatgtggttgggttggg
cctgtttctcccctcgaggcttcaggatctattagcttacagttgaacataaatgggaca
tacagagctcattgggctgatcgattgggattttgcaagggttttggtgctcctttggca
tttagatgcatcaagagtaatggaggcccagttccaaggactttagttggggtcacacgg
atatatcctgttctgtacaaggagaggttaagtgatgggagatctattgtgagatcagaa
aggatggaatgtaaagtgatgcaattataccagcacaggcagtctatggttgtagaagga
attgtttctgagttccaaagggggaacaaagattctcatatacttaatgatagcaacagt
gaaggagcaaaacttttcaaaatgcttgaaacagtagctgaaccagaagttattatggca
gaaatgagtccagagcaactaacttcttttgccacttatcaagcaaaattagaggcaaca
aggcaatcaaatatggaaagatcaattgagaaggccttggaaaacgctggcttaagagag
agagatgtcacaccatttatgagggtgagggtggttggattaactggtaaaaattatcaa
ggaaagggcagctctagagaaggcattataacaatctggaacccggcagagaaacagcaa
tgtgaactggttgaggggcaggcatatgccattctagggcttgtaccaatgaactctgat
tcaaatactctttatttacaagcaaggggatctactacaaagtggcagcctctatctcct
ctagcaactgaacattttaagcctttcttcagtccccgcagatcagttctaatttcaaat
ttgggtgaagttccactttccagtgaatttgatatagctgcattcgtggtgcatgtggga
gatgtttatgaggattctcagcaaaagaaacaatggattttcgtcacagatggctccatg
ctagagttgcaattggaagatctatcaaaatctttacttgccattagcatcagttcacca
tacatagatgatgattcattttcgccaattaactataaccttgttggatccacagttggc
ttctgtaatctcatcaagagaccaaaagaccacttaaatcatatttgggtagcagaagca
actgaaaactcatcatattttttaagtttcgatttcccaacctgttctcaccttagaagt
gccgctgcctctgctcaaagttgggcaaagatctctagcttgatcattgacaagcttaag
gagaatgttttatttattattggggatcgtaaatgttaa
DBGET
integrated database retrieval system
