Citrus x clementina (clementine): CICLE_v10013490mg
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Entry
CICLE_v10013490mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
CICLE_v10013490mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cic04121
]
CICLE_v10013490mg
Enzymes [BR:
cic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
CICLE_v10013490mg
Ubiquitin system [BR:
cic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
CICLE_v10013490mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
zf-C3HC4_3
DUF4729
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
18038974
NCBI-ProteinID:
XP_006430663
UniProt:
V4S8S0
LinkDB
All DBs
Position
Unknown
AA seq
267 aa
AA seq
DB search
MAKNSAKAGKRVGDGEGPSSPKRQRKNNGHDEEEDGSCKNGSEALTITDQDIFDCPICFE
PLTVPVFQCVNGHLACSDCCAKIKRNCPTCSSPTVIVRNWAIEKVIELVQVNCKNAEYGC
QQKMSFSKKRGHEKTCQHSPLPCPLSDCSFLGCSSQFVRHFMAKHNISAVPFKYNSLLNV
NLNVNDSVLLFQEEKNGYLFVLRNRITGELGNIISIRPVCASHDKQFQYQIGVRSQKTSL
TYKYTRRFQNGLEDYEDFIEGYFFMLS
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaattcagcaaaagcagggaaaagggttggagatggagagggaccaagcagt
ccaaagcggcagagaaagaacaatggccatgatgaagaagaagatggaagttgtaaaaat
ggctccgaagctttgaccataaccgaccaagatatttttgattgccccatttgctttgag
cctttgacagttcctgtctttcagtgcgtaaacgggcatctagcttgttctgactgctgc
gccaaaattaagagaaattgcccaacctgcagttcgcccactgttattgtgcgcaactgg
gcaattgagaaagttatagaattggtccaagtaaattgtaagaatgctgagtatggctgc
cagcaaaaaatgagtttcagtaagaagcgcggtcatgaaaagacttgccaacattctcca
ctcccgtgcccgctttcagattgcagcttccttggttgttcaagccaatttgtccgacac
ttcatggccaaacataatatatcagctgtgccctttaagtacaacagcctgctgaacgtc
aacctgaacgtcaatgatagtgtcttgctttttcaagaggagaaaaatgggtaccttttt
gttctcagaaacagaattaccggagagctcgggaatataatttcaattagaccggtttgt
gcatcgcatgataaacagtttcagtaccagattggtgtgaggagccaaaagacctctctt
acatataaatacacgaggagatttcaaaatggcctggaggattatgaggattttatagag
gggtacttttttatgttgtcttga
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