Citrus x clementina (clementine): CICLE_v10013497mg
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Entry
CICLE_v10013497mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic00040
Pentose and glucuronate interconversions
cic01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CICLE_v10013497mg
Enzymes [BR:
cic01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CICLE_v10013497mg
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta_helix
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
18038003
NCBI-ProteinID:
XP_006431086
UniProt:
V4T465
LinkDB
All DBs
Position
Unknown
AA seq
352 aa
AA seq
DB search
MELIRLSLIFYFFLATLVPCLSAHMADSNEAFLGGNIIRRKLLRHEKHNGPRVATNLIVW
CWRCQNDWANNRHKLADCTLSFDKHATGGKHGPIYMVTNSSNNQRDHKNPKLWTLRLFVT
QKGPLWIIFERNISIKSMATLIIGELGNKTIDGRGVDVHNAHGGGIGTHQVKNVIIHGLH
IHNIVHVHGSGDGDGISIYGSIAIIISNSHFIKHDKVILLSASDTFEEDKKMQMRITYNH
FDKELIYGVFDFVHVMNNDHTHWKILGNKFIALYNDYAKQVTMRDASSKYDEIQRSEGDI
FDNGAFFNQSGDPSWKILFHIENEMIKAKLRAYVEWFIRFVGALKCSLVKEC
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggagttgataaggttgagcttgattttttacttcttccttgccaccttggttccatgc
ctctcggcccatatggccgactccaatgaagcatttttaggagggaacattataaggagg
aaattgttgaggcatgaaaaacacaatggaccgcgcgttgcaacaaacctaatagtctgg
tgctggcggtgtcaaaatgactgggccaacaaccgccataaactggccgattgcaccctt
agtttcgacaaacatgccaccggtggaaagcatggacctatttatatggtgactaatagt
tctaataaccaacgtgatcataaaaaccctaaattatggaccttacgcctctttgtgacc
cagaaaggacctttgtggatcatctttgaacgtaatataagtataaagtcaatggcgaca
ttaattataggcgaattaggcaataagaccatcgatggtcgtggagtggatgtacataat
gcacatggaggtggaattggtacacatcaagtgaaaaatgtgatcattcatggacttcat
attcataatattgttcatgttcatggaagtggcgatggagatgggatttcaatatatgga
tctattgccatcatcatttcaaacagccacttcatcaagcatgataaggtgatactgctg
agtgcaagcgatacttttgaggaagataaaaagatgcaaatgagaatcacatataaccat
tttgataaggaattgatttatggtgtatttgacttcgttcatgttatgaacaatgatcac
actcattggaaaatattgggtaacaagttcattgctttatacaatgattatgccaaacag
gtgacaatgagagatgctagctctaaatatgatgaaatacaaagatcagagggagatata
ttcgacaatggggctttctttaatcaatctggtgacccaagttggaagatactattccat
attgagaatgagatgattaaagcgaagctaagagcatatgttgaatggttcattcgcttt
gttggtgcacttaaatgctctcttgtgaaagagtgctag
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