Citrus x clementina (clementine): CICLE_v10013552mg
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Entry
CICLE_v10013552mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cic
Citrus x clementina (clementine)
Pathway
cic04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
CICLE_v10013552mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v10013552mg
03009 Ribosome biogenesis [BR:
cic03009
]
CICLE_v10013552mg
04131 Membrane trafficking [BR:
cic04131
]
CICLE_v10013552mg
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cic04147
]
CICLE_v10013552mg
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
CICLE_v10013552mg
Ribosome biogenesis [BR:
cic03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
CICLE_v10013552mg
Membrane trafficking [BR:
cic04131
]
SNARE
SNARE associated proteins
Others
CICLE_v10013552mg
Autophagy
Aggrephagy
Other aggrephagy associated proteins
CICLE_v10013552mg
Exosome [BR:
cic04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CICLE_v10013552mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_2
AAA_33
AAA_22
AAA_14
TIP49
RNA_helicase
NPHP3_N
AAA_28
Parvo_NS1
nSTAND3
Mg_chelatase
AAA_17
IstB_IS21
AAA_18
AAA_7
ATPase_2
ABC_tran
DUF815
AAA_24
Viral_helicase1
NACHT
TsaE
Vps4_C
ResIII
Sigma54_activat
NB-ARC
SLFN-g3_helicase
AAA_lid_PRS2_C
Zeta_toxin
ATP-synt_ab
bpMoxR
Zot
Motif
Other DBs
NCBI-GeneID:
18039611
NCBI-ProteinID:
XP_006431112
UniProt:
V4SUD3
LinkDB
All DBs
Position
Unknown
AA seq
799 aa
AA seq
DB search
MAADSKKDYSTAILESKKKSPNRLVIDEAINDDNSVITMHPNTMDKLQFFQGDTVLVKGK
KRKDTVCIVLGDEQCEESKVGMNRVVRSNLRVRLGDLVSVHACPDVKYGRRVHILPIDDT
IEGVTGSLFDAYLKSYFTGSYRPVRKGDLFLVRGGMRSVEFKVIETDPGEYCIVAPDTEI
FCEGEPVKREDEEERLNEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGIL
LYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIF
IDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVVVMGATNRPNSIDPALRRFGR
FDREIDIGVPDEVGRLEVFRIHTKNMKLAEDVDLERVARDTHGYVGADLAALCTEAALQC
IREKMDVIDLEDETIDAEVLNSMAVTNEHFRTALEMSNPSALRETVVEVPNVSWEDIGGL
ETVKRELQETVQYPVEHPEKFEKFGLSPSKGVLFYGPPGCGKTLLAKAIANECQANFVSV
KGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGASVGDAGGAADRVLN
QLLTEMDGMNAKKTVFIIGATNRPDVIDPALLRPGRLDQLIYIPLPDEASRLQIFKACLR
KSPISPDVDLSALARYTHGFSGADITEICQRACKYAIRENIEKDIERERSGKRKRENPEA
MEVDDVDEITAAHFEESMKYARRSVSDADIRKYQLFAQTLQQSRGFGSDFRFPDRTESAT
AGAADFFSSAIADDDDLYN
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgattctaagaaagattactcaactgctattctggagagcaagaagaagtct
cccaaccgtcttgtcattgatgaagcaatcaatgatgataactctgttatcacaatgcat
cccaacacgatggacaagcttcagtttttccaaggcgacactgtgttagtaaaggggaag
aagcgaaaggacaccgtttgcattgttcttggtgacgaacaatgcgaagagtcgaaagtc
ggaatgaacagagttgtacgatctaatctcagagttcgccttggagatctagtgtccgtc
catgcgtgccctgatgtgaaatacggaaggcgtgttcacatccttcccattgatgataca
atcgagggtgttactggaagcttatttgatgcgtatttgaagtcctacttcacgggatct
taccggcctgttcggaaaggtgaccttttcctagtcaggggaggaatgcggagtgttgag
tttaaagtaattgagacagaccctggtgaatactgtatcgttgcaccggatactgagatc
ttctgtgagggcgagcctgtcaaacgtgaggatgaggaggagagattgaacgaagtaggc
tatgatgatgttggtggtgtgagaaagcaaatggctcaaatccgcgagcttgtagaactt
cctctcagacaccctcagctcttcaaatcaattggtgtgaagccccctaagggtatcttg
ctttatgggccacctgggactggaaaaaccctgattgcaagagccgttgctaatgagact
ggcgcattcttctttttgattaatggcccggaaattatgtcgaagttagctggtgagagt
gaaagcaatctaaggaaggcattcgaggaagctgaaaagaatgccccatctataatattt
attgatgaaatagattccattgctccaaagagggagaagacaaatggtgaagtggagagg
cgtatagtatcccaacttctaactttgatggatggcctcaagtcccgggcacatgtggtt
gttatgggagctactaataggccgaacagcattgaccccgctctcaggagattcggacga
tttgatcgagagattgacattggtgtacctgatgaagttggaaggttggaagtttttagg
atccacacaaaaaacatgaaacttgctgaagatgttgatcttgaaagagttgcaagagat
acacatggttatgttggtgcagatcttgctgctctctgtacagaggctgcactccagtgt
atcagggagaaaatggatgtcatcgacttggaggatgagactattgatgctgaggtgttg
aattcaatggctgtgactaatgagcacttccgaactgcattggagatgtccaatccttcg
gccttgcgtgaaactgttgtggaggttcctaatgtctcatgggaggatattggtgggttg
gaaaccgttaagagagagcttcaagagactgttcaatacccagtggagcatcctgaaaag
tttgagaaatttggcttgtcaccttctaaaggtgttctcttctatggacctcctggctgt
ggtaaaacccttcttgcaaaagctattgctaatgagtgtcaggcaaactttgtaagtgtc
aaaggacctgagctgctgacaatgtggtttggagagagtgaggcaaacgtgagagaaatc
tttgacaaggctcgacagtcagctccatgtgtgctattcttcgatgaacttgattcgatt
gctactcagcgtggcgcttctgttggagatgctggcggcgccgcagatagagtgttgaat
caacttttaactgaaatggatggtatgaatgccaagaaaacagttttcatcataggcgct
accaacaggcctgacgtcattgacccagcattgttgaggccagggcgtctggaccaattg
atttatatacccctgccagatgaggcttcccgtcttcagatatttaaagcttgtttacgg
aagtcacccatctctcctgatgttgacctatcagctcttgcacgttatactcatggtttc
agtggcgccgatattactgagatatgtcagcgtgcctgcaaatatgctattcgagagaac
attgagaaggacattgagagggagagaagcgggaagaggaagagggagaatcctgaagca
atggaagtagatgacgtcgatgagattacggcagcacactttgaggaatcaatgaaatat
gcccgcaggagtgtcagtgatgcagacatccgaaaataccagctctttgcacagactttg
caacaatctcgtggatttggatccgatttccggttcccagatcgaaccgagagtgccacc
gcaggggctgctgactttttctcttctgccattgctgatgatgatgatctatacaactga
DBGET
integrated database retrieval system
