KEGG   Citrus x clementina (clementine): CICLE_v10013566mg
Entry
CICLE_v10013566mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K11292  transcription elongation factor SPT6
Organism
cic  Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:cic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cic03021]
    CICLE_v10013566mg
   03036 Chromosome and associated proteins [BR:cic03036]
    CICLE_v10013566mg
Transcription machinery [BR:cic03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     CICLE_v10013566mg
Chromosome and associated proteins [BR:cic03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    Other Histone chaperones and regulators
     CICLE_v10013566mg
SSDB
Motif
Pfam: SH2_2 HHH_7 SPT6_acidic YqgF Spt6_S1 HTH_44 HHH_9 SH2 Tex_central_region HHH_3 Tex_N
Other DBs
NCBI-GeneID: 18039893
NCBI-ProteinID: XP_006430480
UniProt: V4SXG1
LinkDB
Position
Unknown
AA seq 1592 aa
EVYGGEEEREPVDGDAVEERDEDEEDEDDEEGQDEYEKDGFIVDDVEEEEEEEEERADSD
EERQKKKKKRKKKEAEDVLDEDDYELLRDNNINYRPKESKKFKRLKKARRDTDEDRYGFS
DEEFDGSGKGGRTAEEKLKRSLFGDDEGAPLEDIAEEEEPVEEEEEDGDIGEEDEMADFI
VDEEEVDEHGAPVRRKKLKKKKNRQAPGISSSALQEAHDIFGDVEELLQLRKQGLESSEW
RERRLEDEFEPIILAEKYMTEKDDQIKMTDVPERMQISEESTGSPPTDGESIVDESTWIY
NQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSL
LKDLEQNEVNNDNNDDFERTPTMKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEE
SRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPK
RSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFN
SSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGKAE
EEKLLQVTIKLPEDFFNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMV
KEARSLMSSRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPE
TTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNL
SCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGN
VKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQV
GLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVN
AVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALE
MAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEE
FYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKL
HEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARK
EKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDG
VYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRK
FRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGF
KFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVPMRSPANGGSTASAGSGWGGS
TNEGGWNRDRSSTPGSRTGRNDYRNGGGRDGHPSGLPRPYGGRGRGRGSYNSNRGNSSNS
ERQDSSYDTPKWDSANKSGDDSWGNFPGAKAQNPAGREAFPGGWGSSGGGGSSGWGGASD
GDNGGWGHSSGGADKDSGWGGGASKRSSDGGW
NT seq 4779 nt   +upstreamnt  +downstreamnt
gaggtgtacgggggtgaggaagagcgagaaccagttgacggagatgctgttgaggagcga
gatgaagacgaggaggatgaggatgacgaggaagggcaggatgaatatgagaaggacgga
ttcattgtagatgatgttgaagaagaggaggaagaagaagaagaaagggcagacagtgat
gaggagagacagaagaagaagaagaaaaggaagaaaaaggaagctgaggatgtccttgac
gaggatgactatgagctcctccgtgacaacaatattaattaccgtccaaaggagagcaaa
aagtttaagcggttgaaaaaagcccggagggatacagatgaggatcgatatggattttct
gatgaggagtttgatggcagcggtaagggtggacgaactgctgaggagaagcttaaacgt
agtttatttggtgatgatgaaggagctccacttgaggacattgcagaagaagaggagccg
gtagaagaggaagaagaggatggtgacattggtgaagaagatgagatggctgactttatt
gttgacgaagaagaagtggatgagcatggagctcctgtgagaaggaaaaagttgaagaaa
aagaaaaatcggcaggcacctggaatttcgtcttcggccttgcaggaagcacatgatatt
tttggtgatgtggaggagcttcttcagcttcgcaagcaaggtttagaatcaagcgaatgg
agggaaaggagacttgaagatgaatttgaaccaatcattttggctgaaaagtatatgaca
gagaaggatgaccagattaagatgactgatgttccagaaagaatgcagatctctgaggaa
agcactggcagtccccctacggatggtgagagtatagtagatgagagcacttggatatat
aatcagcttcttagtggtaccttgcctttgtttggtcagagaggtgctgggtcgcctaaa
gaagggcatgatctttctataagtagggatgacatcatgagatttttggacctattgcac
ttgcagaagttagatatcccctttattgctatgtatcgaaaggaggaatgcttgagcctt
ttgaaagatcttgagcaaaatgaagttaataatgataacaatgatgactttgagagaaca
cctacgatgaaatggcataaggttctctgggcaatccatgatttagacaaaaagtggttg
cttcttcagaagcgaaagagtgctcttcaatcatattataagaagcgttatgaagaagag
tcgcgccggatatatgatgaaacaaggctagctttaaatcaacaactttttgattcgatt
tctaagtctctcgaggctgcagaaacggaaagagaggtggatgatgttgacttaaagttt
aatttgcatttccctccgggtgaggttggtgttgacgaaggtcagtataagaggcctaag
agaagcacaaaatatagtagttgcagtaaagctggtctgtgggaggttgcgagcaagttt
ggttacagctcagagcaacttggattgcagttatccttagaaaagatgggtgatgaattg
gaggatcctaaggaaacacctgaggagatggcttcaaacttcaaatgtgcaatgtttaat
tcttctcaagctgttcttcaaggggctaggcacatggctgctgtcgaaataagctgtgag
ccgtgtgtcaggaaatacgttcgtagtatttttatggataatgctgtggtgtcaacatgt
ccaactcctgatggagattcagcaattgattctttccatcagtttgcagggaaggctgaa
gaggagaaacttctccaagtgactattaagttgcctgaagatttttttaacaagttgttt
agtgactgcaaggagcattatcttagtgatggtgtcagcaaatctgctcaattatggaat
gatcagagagaattgattctgaaggatgctcttgataattttcttttgccttcaatggtg
aaagaagcaagatcattgatgagtagtagagctaaaagctggttactcatggaatatgga
aaagccttgtggaataaagtttctgtaggtccttaccaacgtaaggataatgatattaca
ccagatgaggaagctgctccaagagtattggcttgctgttggggccctggaaaaccagaa
accactttcgttatgttggattcgtcaggggaggtggtagatgtgctttttactggatgt
ctcactttacggtctcaaaatgtacgtgatcagcagagtaagaaaaatgaccaggaacgt
ctattgaagtttatgatggaccatcaacctcatgttgttgtcctaggagctgtgaacttg
tcttgcacctcactgaaagatgatatttatgagatcattttcaagatggtggaggaacat
ccaagagatgttgggcatgagatggatgagttaagcattgtatatggggatgaatctttg
ccacgcctttatgaaaattctcgaatttcatctgaccagctacctgggcagaaaggcaat
gttaagcgtgctgttgcgcttgggcgttatctgcaaaatccgttggcaatggttgcaaca
ttatgtggacctgggagggagatcttgtcttggaagctttgtcccttggagaattttctc
actccagatgagaagtatggaatgattgaacaggttatggtggatgttacgaaccaggtt
ggtttggacattaatttggctatacaccgtgaatggcaatttgctcctttgcaattcata
tctggccttggccccagaaaggcagcatctttacagagatccctagtgagagctggagca
atttttactcgtaaggactttgtaactgctcacgggcttggcaaaaaggtgtttgtgaat
gcagttggctttctgcgtgttcggaggagcgggcaggctgctagcagcagtcagttcatt
gacttgttggatgatacaagaatacatccagaatcttatggtcttgcgcaagagttggcc
aaggaggtatataatagggacattgaaggtgacctgaatgatgatgaagatgcattggag
atggctatagaacatgtgagagaccggcctgatttattgaaaacctatcttctggacaga
cacattaaagagaaaaagcgtgagaataagagagagacattgtatcttataagaagggaa
ctaatacatggtttccaggattggcgcaatcaatataaagaaccaagtcaggatgaggag
ttttatatgatttctggtgaaactgaagatacgcttgctgaagggagggttgtgcaagcc
acggtccgcagggtgcaaggtcaaagagcaatatgtgtacttgaatcaggattggcagga
atgcttatgaaggaagactattcagatgattggagggattctgagttgtctgacaagctt
catgaaggtgacattctcacctgcaagattaaatcaattcagaagaacaggtaccaggtg
ttcttggtttgtagggagagcgagatgagaaataaccggtaccaacattgtcaaaacctt
gatccttactaccatgaagagaggagcagtcgtcaaagtgagcaagaaaaagctcgcaaa
gagaaggagctcgcaaagaaacattttaaggagcggctgattgttcatccctgcttccag
aatgtaacagccgatgaagcaatgaagttattatctgccaaggaacctggtgaaagtatc
atccgtcctagttctcgtggaccttcttatttaactttaaccctcaaagtttatgacgga
gtgtatgcccacaaagacataattgaaggaggaaaggatcataaggacatcaaaagcttg
gttggtattgggaaaacattgaaaattggggaggacacttttgaggacttggatgaggta
gtggatcgatatattgatcccttagtgtcccaccttaaggcaatgcttagctaccgcaag
ttcaggaaaggctctaaagcagaggttgatgagcttctaaggattgagaaagcagagttt
cccacaaggatagtttatggttttggcatttcccatgaacatccgggtacattcattcta
acatatatacgaagcacaaatccccaccatgagtatattggcctgtatcccaagggattt
aagtttcggaaaaggatgtttgaggacattgatcggcttgtggcatactttcagaggcat
attgatgatcctcagggtgactcagcaccatcaatcagatcagttgctgctatggtgcca
atgagaagccctgcgaatgggggctctacagcatctgcgggtagtggctggggcggttca
acaaatgaaggcggctggaatagagatcgatcttctactccaggttcaagaacaggccga
aatgattacagaaatggtggtggtcgagatgggcatccaagtggactaccccggccatat
gggggacgtggacgtggtcgaggttcatataacagcaacagaggaaatagctctaacagt
gagaggcaggattctagctatgatactcctaaatgggattcggctaacaagtcaggggat
gatagttggggcaattttccaggtgccaaagctcaaaatccagcaggcagggaagctttc
ccaggtggttggggcagtagtggaggtggtggcagcagtggttggggtggagccagtgat
ggtgacaatggtgggtggggacattcaagtggtggtgctgacaaagattcagggtgggga
ggtggtgcttccaagagaagttctgacggtgggtggtaa

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