Citrus x clementina (clementine): CICLE_v10013566mg
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Entry
CICLE_v10013566mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K11292
transcription elongation factor SPT6
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cic03021
]
CICLE_v10013566mg
03036 Chromosome and associated proteins [BR:
cic03036
]
CICLE_v10013566mg
Transcription machinery [BR:
cic03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
CICLE_v10013566mg
Chromosome and associated proteins [BR:
cic03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
CICLE_v10013566mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
SPT6_acidic
YqgF
Spt6_S1
HTH_44
HHH_9
SH2
Tex_central_region
HHH_3
Tex_N
Motif
Other DBs
NCBI-GeneID:
18039893
NCBI-ProteinID:
XP_006430480
UniProt:
V4SXG1
LinkDB
All DBs
Position
Unknown
AA seq
1592 aa
AA seq
DB search
EVYGGEEEREPVDGDAVEERDEDEEDEDDEEGQDEYEKDGFIVDDVEEEEEEEEERADSD
EERQKKKKKRKKKEAEDVLDEDDYELLRDNNINYRPKESKKFKRLKKARRDTDEDRYGFS
DEEFDGSGKGGRTAEEKLKRSLFGDDEGAPLEDIAEEEEPVEEEEEDGDIGEEDEMADFI
VDEEEVDEHGAPVRRKKLKKKKNRQAPGISSSALQEAHDIFGDVEELLQLRKQGLESSEW
RERRLEDEFEPIILAEKYMTEKDDQIKMTDVPERMQISEESTGSPPTDGESIVDESTWIY
NQLLSGTLPLFGQRGAGSPKEGHDLSISRDDIMRFLDLLHLQKLDIPFIAMYRKEECLSL
LKDLEQNEVNNDNNDDFERTPTMKWHKVLWAIHDLDKKWLLLQKRKSALQSYYKKRYEEE
SRRIYDETRLALNQQLFDSISKSLEAAETEREVDDVDLKFNLHFPPGEVGVDEGQYKRPK
RSTKYSSCSKAGLWEVASKFGYSSEQLGLQLSLEKMGDELEDPKETPEEMASNFKCAMFN
SSQAVLQGARHMAAVEISCEPCVRKYVRSIFMDNAVVSTCPTPDGDSAIDSFHQFAGKAE
EEKLLQVTIKLPEDFFNKLFSDCKEHYLSDGVSKSAQLWNDQRELILKDALDNFLLPSMV
KEARSLMSSRAKSWLLMEYGKALWNKVSVGPYQRKDNDITPDEEAAPRVLACCWGPGKPE
TTFVMLDSSGEVVDVLFTGCLTLRSQNVRDQQSKKNDQERLLKFMMDHQPHVVVLGAVNL
SCTSLKDDIYEIIFKMVEEHPRDVGHEMDELSIVYGDESLPRLYENSRISSDQLPGQKGN
VKRAVALGRYLQNPLAMVATLCGPGREILSWKLCPLENFLTPDEKYGMIEQVMVDVTNQV
GLDINLAIHREWQFAPLQFISGLGPRKAASLQRSLVRAGAIFTRKDFVTAHGLGKKVFVN
AVGFLRVRRSGQAASSSQFIDLLDDTRIHPESYGLAQELAKEVYNRDIEGDLNDDEDALE
MAIEHVRDRPDLLKTYLLDRHIKEKKRENKRETLYLIRRELIHGFQDWRNQYKEPSQDEE
FYMISGETEDTLAEGRVVQATVRRVQGQRAICVLESGLAGMLMKEDYSDDWRDSELSDKL
HEGDILTCKIKSIQKNRYQVFLVCRESEMRNNRYQHCQNLDPYYHEERSSRQSEQEKARK
EKELAKKHFKERLIVHPCFQNVTADEAMKLLSAKEPGESIIRPSSRGPSYLTLTLKVYDG
VYAHKDIIEGGKDHKDIKSLVGIGKTLKIGEDTFEDLDEVVDRYIDPLVSHLKAMLSYRK
FRKGSKAEVDELLRIEKAEFPTRIVYGFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGF
KFRKRMFEDIDRLVAYFQRHIDDPQGDSAPSIRSVAAMVPMRSPANGGSTASAGSGWGGS
TNEGGWNRDRSSTPGSRTGRNDYRNGGGRDGHPSGLPRPYGGRGRGRGSYNSNRGNSSNS
ERQDSSYDTPKWDSANKSGDDSWGNFPGAKAQNPAGREAFPGGWGSSGGGGSSGWGGASD
GDNGGWGHSSGGADKDSGWGGGASKRSSDGGW
NT seq
4779 nt
NT seq
+upstream
nt +downstream
nt
gaggtgtacgggggtgaggaagagcgagaaccagttgacggagatgctgttgaggagcga
gatgaagacgaggaggatgaggatgacgaggaagggcaggatgaatatgagaaggacgga
ttcattgtagatgatgttgaagaagaggaggaagaagaagaagaaagggcagacagtgat
gaggagagacagaagaagaagaagaaaaggaagaaaaaggaagctgaggatgtccttgac
gaggatgactatgagctcctccgtgacaacaatattaattaccgtccaaaggagagcaaa
aagtttaagcggttgaaaaaagcccggagggatacagatgaggatcgatatggattttct
gatgaggagtttgatggcagcggtaagggtggacgaactgctgaggagaagcttaaacgt
agtttatttggtgatgatgaaggagctccacttgaggacattgcagaagaagaggagccg
gtagaagaggaagaagaggatggtgacattggtgaagaagatgagatggctgactttatt
gttgacgaagaagaagtggatgagcatggagctcctgtgagaaggaaaaagttgaagaaa
aagaaaaatcggcaggcacctggaatttcgtcttcggccttgcaggaagcacatgatatt
tttggtgatgtggaggagcttcttcagcttcgcaagcaaggtttagaatcaagcgaatgg
agggaaaggagacttgaagatgaatttgaaccaatcattttggctgaaaagtatatgaca
gagaaggatgaccagattaagatgactgatgttccagaaagaatgcagatctctgaggaa
agcactggcagtccccctacggatggtgagagtatagtagatgagagcacttggatatat
aatcagcttcttagtggtaccttgcctttgtttggtcagagaggtgctgggtcgcctaaa
gaagggcatgatctttctataagtagggatgacatcatgagatttttggacctattgcac
ttgcagaagttagatatcccctttattgctatgtatcgaaaggaggaatgcttgagcctt
ttgaaagatcttgagcaaaatgaagttaataatgataacaatgatgactttgagagaaca
cctacgatgaaatggcataaggttctctgggcaatccatgatttagacaaaaagtggttg
cttcttcagaagcgaaagagtgctcttcaatcatattataagaagcgttatgaagaagag
tcgcgccggatatatgatgaaacaaggctagctttaaatcaacaactttttgattcgatt
tctaagtctctcgaggctgcagaaacggaaagagaggtggatgatgttgacttaaagttt
aatttgcatttccctccgggtgaggttggtgttgacgaaggtcagtataagaggcctaag
agaagcacaaaatatagtagttgcagtaaagctggtctgtgggaggttgcgagcaagttt
ggttacagctcagagcaacttggattgcagttatccttagaaaagatgggtgatgaattg
gaggatcctaaggaaacacctgaggagatggcttcaaacttcaaatgtgcaatgtttaat
tcttctcaagctgttcttcaaggggctaggcacatggctgctgtcgaaataagctgtgag
ccgtgtgtcaggaaatacgttcgtagtatttttatggataatgctgtggtgtcaacatgt
ccaactcctgatggagattcagcaattgattctttccatcagtttgcagggaaggctgaa
gaggagaaacttctccaagtgactattaagttgcctgaagatttttttaacaagttgttt
agtgactgcaaggagcattatcttagtgatggtgtcagcaaatctgctcaattatggaat
gatcagagagaattgattctgaaggatgctcttgataattttcttttgccttcaatggtg
aaagaagcaagatcattgatgagtagtagagctaaaagctggttactcatggaatatgga
aaagccttgtggaataaagtttctgtaggtccttaccaacgtaaggataatgatattaca
ccagatgaggaagctgctccaagagtattggcttgctgttggggccctggaaaaccagaa
accactttcgttatgttggattcgtcaggggaggtggtagatgtgctttttactggatgt
ctcactttacggtctcaaaatgtacgtgatcagcagagtaagaaaaatgaccaggaacgt
ctattgaagtttatgatggaccatcaacctcatgttgttgtcctaggagctgtgaacttg
tcttgcacctcactgaaagatgatatttatgagatcattttcaagatggtggaggaacat
ccaagagatgttgggcatgagatggatgagttaagcattgtatatggggatgaatctttg
ccacgcctttatgaaaattctcgaatttcatctgaccagctacctgggcagaaaggcaat
gttaagcgtgctgttgcgcttgggcgttatctgcaaaatccgttggcaatggttgcaaca
ttatgtggacctgggagggagatcttgtcttggaagctttgtcccttggagaattttctc
actccagatgagaagtatggaatgattgaacaggttatggtggatgttacgaaccaggtt
ggtttggacattaatttggctatacaccgtgaatggcaatttgctcctttgcaattcata
tctggccttggccccagaaaggcagcatctttacagagatccctagtgagagctggagca
atttttactcgtaaggactttgtaactgctcacgggcttggcaaaaaggtgtttgtgaat
gcagttggctttctgcgtgttcggaggagcgggcaggctgctagcagcagtcagttcatt
gacttgttggatgatacaagaatacatccagaatcttatggtcttgcgcaagagttggcc
aaggaggtatataatagggacattgaaggtgacctgaatgatgatgaagatgcattggag
atggctatagaacatgtgagagaccggcctgatttattgaaaacctatcttctggacaga
cacattaaagagaaaaagcgtgagaataagagagagacattgtatcttataagaagggaa
ctaatacatggtttccaggattggcgcaatcaatataaagaaccaagtcaggatgaggag
ttttatatgatttctggtgaaactgaagatacgcttgctgaagggagggttgtgcaagcc
acggtccgcagggtgcaaggtcaaagagcaatatgtgtacttgaatcaggattggcagga
atgcttatgaaggaagactattcagatgattggagggattctgagttgtctgacaagctt
catgaaggtgacattctcacctgcaagattaaatcaattcagaagaacaggtaccaggtg
ttcttggtttgtagggagagcgagatgagaaataaccggtaccaacattgtcaaaacctt
gatccttactaccatgaagagaggagcagtcgtcaaagtgagcaagaaaaagctcgcaaa
gagaaggagctcgcaaagaaacattttaaggagcggctgattgttcatccctgcttccag
aatgtaacagccgatgaagcaatgaagttattatctgccaaggaacctggtgaaagtatc
atccgtcctagttctcgtggaccttcttatttaactttaaccctcaaagtttatgacgga
gtgtatgcccacaaagacataattgaaggaggaaaggatcataaggacatcaaaagcttg
gttggtattgggaaaacattgaaaattggggaggacacttttgaggacttggatgaggta
gtggatcgatatattgatcccttagtgtcccaccttaaggcaatgcttagctaccgcaag
ttcaggaaaggctctaaagcagaggttgatgagcttctaaggattgagaaagcagagttt
cccacaaggatagtttatggttttggcatttcccatgaacatccgggtacattcattcta
acatatatacgaagcacaaatccccaccatgagtatattggcctgtatcccaagggattt
aagtttcggaaaaggatgtttgaggacattgatcggcttgtggcatactttcagaggcat
attgatgatcctcagggtgactcagcaccatcaatcagatcagttgctgctatggtgcca
atgagaagccctgcgaatgggggctctacagcatctgcgggtagtggctggggcggttca
acaaatgaaggcggctggaatagagatcgatcttctactccaggttcaagaacaggccga
aatgattacagaaatggtggtggtcgagatgggcatccaagtggactaccccggccatat
gggggacgtggacgtggtcgaggttcatataacagcaacagaggaaatagctctaacagt
gagaggcaggattctagctatgatactcctaaatgggattcggctaacaagtcaggggat
gatagttggggcaattttccaggtgccaaagctcaaaatccagcaggcagggaagctttc
ccaggtggttggggcagtagtggaggtggtggcagcagtggttggggtggagccagtgat
ggtgacaatggtgggtggggacattcaagtggtggtgctgacaaagattcagggtgggga
ggtggtgcttccaagagaagttctgacggtgggtggtaa
DBGET
integrated database retrieval system