Citrus x clementina (clementine): CICLE_v10013750mg
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Entry
CICLE_v10013750mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic00040
Pentose and glucuronate interconversions
cic01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CICLE_v10013750mg
Enzymes [BR:
cic01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CICLE_v10013750mg
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
18039898
NCBI-ProteinID:
XP_006428983
UniProt:
V4S4A9
LinkDB
All DBs
Position
Unknown
AA seq
438 aa
AA seq
DB search
MQMELTKLRLFFLFSFAALIPCLSANISEVDEVWRRRAEEAMQTTEQYYDPNPVAIASHL
NMKVQDLSKQTAARRGLLNAESGQCEATNPIDNCWRCKENWAENRQALAGCALGFGIKAT
GGKGGKIYEVTDPSDNDMENPKVGTLRHAVIQKEPLWIIFAKDMNIKLQQELIVQGKKTI
DGRGANVHIANGAGFMLQFVQNVIIHGIHIHNISPRSGGMIRDSVDHVGKRGQSDGDAVS
IFGSSNIWLDHLTLSQAHDGLIDAIQASTAITISNCHFSNHDKAILLGASDTFTEDKKMQ
VTVAFNRFDKGLVQRMPCVRFGFAHVVNNDYNQWEMYAIGGLKGPTILSQGNRFFASDNQ
NTKEVTKRMNCSPEEGKSWIWRSEGDVFLNGAYFNSSGDPKKQIEYQMDDVIKPKPGTEV
ERITKFAGALVCKPGQKC
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatggagctaactaagctaagattattctttctcttctcttttgccgctttgatc
ccttgcctatcagctaatatcagtgaggtcgatgaggtatggaggagacgagctgaagaa
gccatgcagaccactgagcagtactatgatccaaaccccgtagctattgccagccacctg
aacatgaaagttcaagatttgtcaaagcagactgctgctaggaggggcttgttgaatgca
gaatcagggcaatgcgaggcaacaaatccaattgacaattgctggcgttgtaaagagaac
tgggcagaaaatcgacaagcgttggcgggttgcgcactcggtttcggcatcaaagccact
ggaggaaaaggtggaaaaatatatgaggtgactgatccttctgacaatgacatggagaac
cctaaggttgggactctacgacatgcagtgatccaaaaagaacctttatggatcatcttt
gccaaggatatgaacattaagttgcaacaagaattgattgtccagggtaagaagaccata
gatgggcgtggggccaatgtacacattgccaatggagctggatttatgctgcagtttgtg
caaaatgtgatcattcatgggattcatattcataacatttctcctcgcagtggtggtatg
attagggactctgtggatcatgtgggaaagaggggtcaaagtgatggggacgctgtttca
atatttggttcgtcaaatatttggcttgatcatcttacattatctcaagcccatgacggg
ctcattgatgccattcaagcatccacagccattaccatttcaaactgccacttctccaac
catgataaggcaattttgctaggtgcaagtgatactttcacagaagataaaaaaatgcaa
gtgactgtagcatttaatcgttttgataagggactggttcaaagaatgccatgtgtcaga
tttggtttcgctcatgttgtgaacaatgattacaatcaatgggaaatgtatgcaattggt
ggtctcaaaggccccaccattcttagccagggtaataggttctttgcctcagataaccaa
aataccaaagaggtgaccaagagaatgaattgcagccctgaagaagggaagagttggata
tggagatcggagggagatgtatttttgaatggggcttattttaattcatctggtgaccca
aaaaagcaaatcgaataccaaatggatgatgtaattaaaccaaagccaggaacagaagtt
gagaggatcacaaaattcgctggggcacttgtttgcaagccaggccagaaatgttaa
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