Citrus x clementina (clementine): CICLE_v100140191m
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Entry
CICLE_v100140191m CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cic03021
]
CICLE_v100140191m
03036 Chromosome and associated proteins [BR:
cic03036
]
CICLE_v100140191m
Transcription machinery [BR:
cic03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
CICLE_v100140191m
Chromosome and associated proteins [BR:
cic03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
CICLE_v100140191m
SLIK complex
CICLE_v100140191m
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
Helicase_C
CHD1-like_C
HDA2-3
ResIII
DEAD
SWI2_SNF2
OAM_alpha
KH_PARP14_5
Motif
Other DBs
NCBI-GeneID:
18050545
NCBI-ProteinID:
XP_006446247
UniProt:
V4U0S3
LinkDB
All DBs
Position
Unknown
AA seq
1204 aa
AA seq
DB search
EKDEIIDFAQDAIDEYKAREAAMAEQGKMVDLQRKKGKASLRKLEEQPEWLRGGKLRDYQ
LEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQQIPGPFLVVVPLSTLSNW
AKEFRKWLPTMNVIVYVGTRASREVCQQYEFYNDKKVGRPIKFNTLLTTYEVVLKDKAVL
SKIKWNYLMVDEAHRLKNSEAQLYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDHD
KFKSKDDFVQNYKNLSSFNENELANLHMELRPHILRRIIKDVEKSLPPKIERILRVEMSP
LQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDTSIND
TSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSYKGFQFQRLDG
STKAELRHQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMS
RAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGRLEKKETKKGSY
FDKNELSAILRFGAEELFKEDRNDEESKKRLLGMDIDEILERAEKVEEKEAEGEGGNELL
SAFKVANFCGAEDDGSFWSRWIKPEAVAQAEDALAPRAARNTKSYAEANEPERSNKRKKK
GSELQEPQERVQKRRKAEFSVPSVPFIDGASAQVRDWSYGNLSKRDATRFYRAVMKFGNQ
SQISLIARDAGGAVATAPQEVVVELFDILIDGCREAVEVGSPDPKGPPLLDFFGVSVKAN
DLINRVEELQLLAKRISRYEDPIKQFRVLSYLKPSNWSKGCGWNQFDDARLLLGIHYHGF
GNWENIRLDERLGLTKKIAPVELQHHETFLPRAPNLKERANALLEMELAAVGAKNANAKV
GRKASKKGREKSENILNMPISRLRDKKGKPGSAKVNFQSTKDRFHKPQRVEQPLTKEEGE
MSDNEEVYEQFKEVKWMEWCEDVMADEIRTLQRLQRLQATSDNLPKEKVLSKIRNYLQLI
GRRIDQIVLEHEEELYKQDRMTMRLWNYVSTFSNLSGEKLHQIYSKLKQERQEEAGIGHS
HINGSASGSIDNDLNFSTFNRHAERQKGHKNVSTYQMTEPIHKGIDPKKFEAWKRRRRAE
TDMYSQAQPMLQRPMNNGTRLPDPNSLGILGAAPTDNRRFVTERRYPMRQTGFPPRQGFP
SGIN
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
gagaaggacgaaattattgattttgctcaagatgctattgatgagtacaaggctcgtgag
gctgcaatggctgaacaagggaaaatggtggatctccagcgtaagaaaggcaaagcgagt
ttacggaagcttgaggaacaacctgaatggttaagaggaggaaagcttcgtgactatcag
cttgagggtctaaactttcttgtgaacagttggcgaaatgataccaatgtcattttagct
gatgaaatgggtcttggaaaaacagtccagtcagtgtcaatgcttggtttcttacagaac
gctcaacaaattcctggtccatttcttgtagttgtaccattatccaccttgtcaaactgg
gcgaaagagtttagaaaatggcttcctaccatgaatgtgattgtatatgttggtacacgt
gcaagccgagaggtttgtcagcaatatgaattttataatgacaagaaagtcggcaggcct
ataaaatttaatacactgttaaccacatatgaagttgtcctgaaggacaaggctgttctg
tccaagataaagtggaactatttgatggttgatgaagctcataggttaaagaacagtgaa
gcacagttgtatacaactctctcggaatttagcactaagaacaagttacttattactggc
acacccttgcaaaacagtgtggaagagctatgggctctgcttcacttccttgatcatgac
aagtttaagagtaaggatgatttcgttcaaaattacaagaatctcagttcattcaatgaa
aatgagcttgcaaatcttcatatggaattgaggccgcacattcttcggagaattataaaa
gacgtggagaagtctttgcctccgaaaattgaacgtattcttagagttgagatgtcccct
cttcaaaagcagtactacaagtggattttggaacgcaacttccacgacttgaacaaagga
gttcgtgggaatcaagtttcacttctgaatattgtggtagagttaaagaaatgttgcaac
catcccttcctttttgagagtgcagaccatggttatggtggggacaccagcatcaatgat
accagcaaactggagagaattattttgagcagtgggaaactagtgatactggacaagcta
cttgtgaggttgcatgagacaaaacatcgtgttctgatcttttctcagatggttagaatg
ttggatatactagctgagtatatgtcgtataaaggtttccagtttcaaaggcttgatggt
agtacaaaggctgagttgcgccaccaagctatggatcattttaatgcacctggtagtgag
gatttctgtttcttgctttcaactcgagctggtggtcttggtatcaatcttgcaacagct
gacactgttataatatttgattccgactggaatcctcaaaatgacttgcaggctatgagt
agagctcatagaattggacagcaagaagttgtcaacatctatagatttgttacaagcaaa
agtgtcgaggaggatatcctggaacgtgctaagaaaaagatggttcttgatcatttggtg
atccaaaagttgaatgctgagggtagactggagaagaaagaaacaaagaaagggagttat
tttgataaaaatgaactttcggcaattttgagattcggagcagaggaactttttaaagag
gacagaaacgatgaggagagcaaaaaaagactgttaggcatggatattgatgaaatactt
gaaagagcagagaaagtagaggagaaggaagctgaaggagaaggagggaatgaattgttg
agtgcttttaaggttgccaatttctgtggtgctgaagatgatggtagcttctggagtcgt
tggattaaacctgaagctgtagctcaagctgaggatgctttagctcctcgtgctgcaagg
aataccaaaagctatgctgaagcaaatgaacccgagagaagtaataaaaggaagaagaaa
ggatctgagcttcaggagcctcaggagagagttcagaagcgccgcaaagcagaattttcg
gttccatctgttccatttattgatggagcatctgctcaagtgagagactggtcatatggg
aatctatccaagagagatgccacgcgtttttatcgtgcggttatgaaattcggaaaccag
agtcaaatcagcttaatagctcgagatgctggtggtgcagttgcaacagctccacaagaa
gtggtggttgaactttttgatattttaattgatgggtgtagagaagcagttgaagtagga
agtccggacccaaagggccctcctttgctggatttttttggtgtctctgtgaaggctaat
gatctaattaaccgtgttgaagaacttcaacttctagcaaagcgtataagtcgctatgaa
gatcctattaagcaattccgagtgttgtcatatcttaaaccgtcaaattggtccaaaggt
tgcggctggaatcagtttgatgatgcaagattgcttctgggaatacactaccatggtttc
ggcaattgggaaaacataaggttagatgagaggcttggccttacgaagaagattgctcct
gttgaacttcaacatcatgagaccttccttccacgtgcaccaaatttgaaggagcgtgct
aatgcacttttggaaatggaacttgcagctgttggtgcaaagaatgcgaatgctaaagtg
ggacgtaaggcttccaagaagggcagagagaaatctgagaatattttgaacatgccaata
tctcgcttgagggacaagaaaggaaagcctggttctgctaaggtcaatttccaatctacc
aaagatagatttcataaacctcaaagagttgaacaacctttaacaaaagaggagggtgaa
atgtcggacaacgaggaagtatatgaacaatttaaggaagtgaaatggatggaatggtgt
gaagatgtcatggctgatgaaattagaaccctgcagcgccttcaacgattgcaagctacc
agtgacaatcttccaaaggaaaaggtgctttcaaaaattcggaattacttgcagcttata
gggcgaaggatagaccaaattgtcttagaacatgaggaggaactatataagcaagatagg
atgactatgcgattatggaactacgtctctactttttcaaatctttctggggagaaactg
catcagatttattccaaactcaagcaggagcggcaagaggaagcagggattggacattcc
cacattaatggctctgcttctggttctattgataatgatctaaatttttctacattcaac
cgccatgctgagaggcaaaagggacataaaaatgtgtctacttatcaaatgacagaacca
attcacaaaggcattgatccaaaaaagtttgaagcatggaaacgaaggagaagggcagaa
acggatatgtattcccaagctcagcccatgttgcaaagacctatgaataatggcactcgt
ctaccagatccaaactcgttaggaattcttggtgcggcaccaactgacaacaggcgtttt
gttactgagaggcgctacccaatgcgtcaaaccggctttcctcctagacagggtttcccg
tctggcatcaattag
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integrated database retrieval system
