Citrus x clementina (clementine): CICLE_v10014024mg
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Entry
CICLE_v10014024mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v10014024mg
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
CICLE_v10014024mg
Surveillance factors
Other surveillance factors
CICLE_v10014024mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
18052956
NCBI-ProteinID:
XP_006447020
UniProt:
V4U831
LinkDB
All DBs
Position
Unknown
AA seq
1716 aa
AA seq
DB search
MADGKLDLPDDLLSTKTFDQRRSVKDEAWGGSGDEKSAMGLLDESKVADQATSDSSIPLS
PQWLYAKPIDAKTSSTGASGEMRAPNSLPHGNVTDPNLKDSWRLDGSQDKKDWRKIVPDV
ESNRRWREEERETGLLGRRDRRKEDRRADALSKDMSETRPLSSTDRWHDSRRDSKWTSRW
GPEDKDKDSRNEKRTDVEKEDIQIDRQSFVSGNRPASERDNDSRDKWRPRHRMEAHAGGS
AAYRSAPGFGPERGRMEGSNVRFAAGRGRSGNNGITGRSPSVSVIGSVPVDKLCSSSAAS
TYCYPRGKLLDIYRKHKTVPSFDAIPDEMEHVSLITQVAAIEPLAFVAPDAEEEAVLWDI
WKGKIGSSGVLQNSFRDKNVPSSDDITGFDATSGGQVVALVLSDETIETVENAAVHISSQ
DNGAAGLDTSDSLAAVSKERDALIEGKEKFMTGTTDAVVHDGLISSIFNRQNICSAGETC
GLSNSVNDLKYSESQQRADLILSKHSKLGFIEPVTLDVGGQLPDDSSSLFDFTSLQKNSS
SDQLHLQGDDKAHSVDVLPPDPEDLSLFYLDPQGEIQGPYMGIDIIMWFEQGYFGTDLPV
RLSDAPAGSPFQELGEIMPHLKFKAASAPGTNLTATSQLSDAVGGTLEDSLAPSVSGSDF
KGSAVANDQQWVSTAASSINYYSRVPNNENKSELHYADDKNFQNSVAQDEEIVFPGRPAS
SCGNQFRKSASDIHSSISSPASHHSLANEFSETTMPKHQDDDKLHPFGLLMSELKDSSHL
RRTQSSNMASGIGDQDQVMDSLLEREATFVNQSGFRMTADQPSFGESLSDDYRKNTHSKQ
NIHQGSVDAHHLLRREQTVNGFNLGEHIISQKLQNELQHHNLLSHHSSHATGLGIEEIPG
YALSQSKNLSLQRSGHPRLEMEQLLELQFPQQRHLELQQQRHLELQQQQHLELQQQRHLE
ELQQQRQLEELKQQRRLEELQQRRQLEELQQRRHLEELQQRHLEELQQQRHLEELQQLRN
IELQQQRHLELQQQQRLLQHQQQQQQQQQQQRLNQMKLLQQEQQQQFLWEQLLQHQISDP
VYGRLKADTMRDNPLDQVQLRMHLLHELQQNFQKGQFDPSMEQIIQAKIGQNAHRGQSAA
LLDLISQAKHRNMLSSEQQLHFQQDPLQGRQVLSLRQQLGLEGERRINGPWSVDEAGQFF
RNPADHHHVQSAGLNSSDFYQQHRRLSSPVEQFDPRHWNPAIQEQHQLGFFEPSSTALDR
SMNLDNVNACGQGLDFPDQHLYMHSSGQLGSLSSGVSSHSRHVSNEFYASYPGMIEHHSP
VNSGLLESNWIEKHIQQLNLKAEQQRKESDINMNAVNSSIWAPTTGDEENSKRAPMDHFH
QNLGHKSMQSSEDDYQHLISSSKTQETVWPVSETHSFNHPFSHLPDQEVSEISSFIEGPQ
NFNNGAKFKHAGNTERLIPRSSSGATMEQSFLSGIVEHPNSISKSAAESELQGLKGNRHG
SKGMSWSVSEIKDNLEETENSLDCGEQPSTAHSRQSSLSTSGGNGGYDIGSDKSVGEVSN
DRLPTMLPKGLDNDWNKRPTVTRVASSSQDEPTAAPIVKQKSSASLASDEGKRESVNNPV
GARVSETGKKDLRFRRTSSFSDAAVSETSFIDMLKKPVHPEADPSNGAAFESSDGAPSGR
GGKKKGKKGRQIDPALLGFKVSSNRIMMGEIQRLED
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atggctgacggaaagcttgatctgccggacgatctcctctccaccaaaacgttcgatcaa
cgccgctctgtcaaagatgaagcttggggcggcagtggtgacgagaagtcagctatgggg
ttacttgatgagtcaaaagttgctgatcaggcaacttcagacagcagcattcctttgtct
ccgcagtggctttatgctaaaccaattgatgccaagacatcaagtacaggagcatcaggg
gaaatgcgtgcaccaaattctttgcctcatggaaatgtcactgatcctaatctaaaagac
agttggcgtttagatggatctcaggataagaaagactggaggaagattgtgcctgatgtt
gaaagcaaccgccgttggcgtgaagaggagagagaaacgggcttacttggtagaagagat
cgcagaaaagaagatcgtcgtgctgatgccttatctaaggatatgtctgaaactagaccc
ctgtcttctacagatcgttggcatgattcccggagagatagcaagtggacttcaagatgg
ggtcctgaagataaagacaaggattctcgaaatgaaaaaaggacagatgttgagaaggaa
gatattcagattgacagacaatcttttgtcagtgggaatcgcccagcctctgagcgtgac
aatgactctcgtgataagtggaggccacgccatcgtatggaagctcatgctggtggttcg
gctgcatatcgctctgcaccaggatttgggccagagaggggacggatggaaggctcaaat
gtgcgatttgcagcaggacgtggaaggtctggtaataatggaatcacaggcagatcccct
tctgtatctgttattggttctgttcctgtagataaattatgcagctcctctgctgccagt
acatattgctaccctagaggaaagcttcttgacatttatcgcaagcataagactgttccg
agttttgatgccatacctgatgagatggaacacgtgtcactgataacacaagtagcagcc
attgagccattggcttttgttgctcctgatgcagaggaagaggctgttctttgggacata
tggaaaggaaaaatcggaagcagtggtgtgttgcagaattcatttagggacaaaaatgtg
ccatctagtgatgatattacaggttttgatgccacgagtggaggacaagtggttgctttg
gtgctgtctgacgaaactattgaaactgttgaaaatgctgctgtacatatttcttctcaa
gataatggagctgcgggactagatacatctgattcactggcagctgtttccaaggaaagg
gatgctttgatagaaggcaaagagaagtttatgacaggaacaactgatgcagttgtacat
gatggcttgataagttcaatttttaacagacaaaatatctgcagtgcaggggagacttgt
ggtctgagtaatagtgtgaatgatctgaaatattctgaaagccaacaacgagcagatttg
attctgtcaaagcattctaagttagggtttattgagccagttactttagatgttggtggc
cagcttcctgatgattcaagttctctatttgattttacatccctccagaaaaattcaagt
agtgatcagcttcatcttcaaggcgatgacaaggctcattcagtggatgtcttacctcca
gacccagaggatttaagcttgttttatcttgatcctcaaggagaaattcagggaccatat
atgggaattgatatcattatgtggtttgagcaaggctattttggaaccgatttacctgtt
cggttgtcagatgcccctgctggatcaccctttcaagaacttggtgaaattatgccacat
ctaaaatttaaagctgcgtctgcccctggtactaatctaactgccacatcacagctatct
gatgctgttggaggtaccttggaagacagcctcgcccctagtgtttctggttctgacttt
aaggggtctgctgttgcaaatgatcaacagtgggtttcaactgcagcttcgagcattaat
tattattcaagagtgcctaataatgaaaataagtccgagttgcattatgctgatgataag
aacttccaaaattctgttgctcaagatgaagaaattgtcttccctgggaggcctgcaagt
agctgtggaaatcaatttaggaaatctgctagtgatattcacagttctatatcgagtcct
gctagccatcattcccttgctaatgaattttctgaaactaccatgcctaaacatcaggat
gatgataaattgcatccttttggccttttgatgtctgagctcaaagacagctctcacttg
aggcgtactcagtcatcaaatatggcctcaggcataggtgatcaggatcaggtcatggat
tctttacttgagagagaagccacatttgtcaatcagagtggttttcgtatgacggctgat
caaccctctttcggggagtccttgtctgatgattataggaaaaacacacattctaaacaa
aacattcatcaaggttctgtagatgctcaccacttgttgcgtagggagcaaacagtgaac
ggttttaatctgggagagcacataatatcacaaaagttgcaaaatgaactacaacatcac
aatctgttgtctcatcattcttcacatgccactggattgggaatagaggaaattcctggt
tatgctctttctcagagcaagaacctaagtctgcaacgttcaggccatccacgattagaa
atggaacaactattggaacttcaatttccacagcagcgacaccttgagcttcaacaacag
cggcaccttgagcttcaacaacagcagcaccttgagcttcagcaacaacggcatctcgaa
gaactccaacaacaaaggcaacttgaagaactcaaacagcagaggcgacttgaagaactc
caacaacggaggcaacttgaagaactccaacaacggaggcatcttgaagaacttcaacag
cggcatcttgaagaactccaacaacagaggcatcttgaagaacttcagcaactgcgaaat
attgaacttcagcaacagaggcatcttgagcttcagcaacagcaacggttattgcagcat
cagcaacagcagcaacagcagcagcagcagcagcgtctcaaccaaatgaaattgcttcag
caagaacagcaacagcagtttctttgggaacagttattgcagcatcagatatctgatcct
gtttatggacggttgaaggcagatactatgagagacaacccgctcgatcaggttcagtta
aggatgcaccttctgcatgaacttcaacaaaactttcaaaaagggcagtttgatccatca
atggagcagattatccaagcaaagattggtcagaatgcacaccgaggacagtcagctgct
ttactagacctcatatcacaggcaaagcatcgaaatatgctttcttcagaacagcagctt
cattttcagcaagaccctttgcagggtcggcaagtattgtcattgaggcagcagttgggg
ttggagggggaaaggcgcatcaatgggccatggtcagtggatgaggctggtcaatttttt
aggaatcctgctgatcatcaccatgttcagtctgcaggccttaattcttcagatttttac
cagcaacatcggaggctttcctcacctgtggagcaatttgaccctcgtcattggaatcct
gctatacaagaacagcatcagctaggcttttttgaacctagctctacagctttggatagg
tcaatgaatttagataatgtgaatgcttgtggccaaggtttagatttcccagatcaacat
ctgtatatgcattcctctggccagcttggttctttgtcttcaggtgtctcttctcactcc
cgtcatgtttctaatgagttttatgcttcttatccaggcatgatagagcaccactcccca
gtgaatagtgggctgctagaaagtaactggattgagaaacatattcaacagttgaatctt
aaagctgaacagcaaagaaaggagtcagatattaatatgaatgctgtgaattcaagtata
tgggcacccaccacaggtgatgaggagaattcaaagcgagctccaatggaccatttccat
caaaacttgggtcataaatctatgcagtcatcagaagatgattatcaacatcttatatca
tcttctaaaactcaggaaactgtttggccagtttctgagacacactcttttaatcatcct
tttagtcatctaccagatcaagaagtcagtgagattagctcctttattgaaggccctcaa
aatttcaataacggtgcaaaatttaagcatgcaggaaacactgaaagattgatcccaaga
tctagttctggagcaacaatggaacagtcattcttgtcaggcattgtagaacatcctaac
tctatcagtaaatcagctgcggagtctgaactgcaagggctgaaggggaacagacatggg
tcaaaaggcatgagttggtcagtttcagagatcaaggataacttggaggaaacagaaaat
tcgctggattgtggggagcaacctagtactgcccatagtaggcagagctcgcttagtact
tctggtggaaatggaggctatgatattggatcagataagtcagtcggagaagtttctaat
gacaggctacccaccatgttacccaaagggcttgacaatgattggaacaaacgcccaact
gtaacaagagttgcttcatcttcccaggatgagccaactgctgctccaattgtcaagcag
aaaagttcagcttcccttgcatctgatgaaggaaagcgggaatctgttaataatccagta
ggagccagagtctctgaaactggcaagaaagatctgcgatttaggaggacctcatctttc
agtgatgcagcagtctcggagacatcattcatagacatgcttaagaaaccagttcatcca
gaagcagatccatcaaatggggctgcttttgagtcatctgatggtgcaccaagtgggcgg
ggtggcaaaaagaaaggaaagaaaggaaggcagatagatcccgctctccttggatttaaa
gtttctagcaaccggatcatgatgggtgaaattcagcgccttgaagattga
DBGET
integrated database retrieval system