KEGG   Citrus x clementina (clementine): CICLE_v10014024mg
Entry
CICLE_v10014024mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K18730  PERQ amino acid-rich with GYF domain-containing protein
Organism
cic  Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:cic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cic03019]
    CICLE_v10014024mg
Messenger RNA biogenesis [BR:cic03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     CICLE_v10014024mg
   Surveillance factors
    Other surveillance factors
     CICLE_v10014024mg
SSDB
Motif
Pfam: GYF
Other DBs
NCBI-GeneID: 18052956
NCBI-ProteinID: XP_006447020
UniProt: V4U831
LinkDB
Position
Unknown
AA seq 1716 aa
MADGKLDLPDDLLSTKTFDQRRSVKDEAWGGSGDEKSAMGLLDESKVADQATSDSSIPLS
PQWLYAKPIDAKTSSTGASGEMRAPNSLPHGNVTDPNLKDSWRLDGSQDKKDWRKIVPDV
ESNRRWREEERETGLLGRRDRRKEDRRADALSKDMSETRPLSSTDRWHDSRRDSKWTSRW
GPEDKDKDSRNEKRTDVEKEDIQIDRQSFVSGNRPASERDNDSRDKWRPRHRMEAHAGGS
AAYRSAPGFGPERGRMEGSNVRFAAGRGRSGNNGITGRSPSVSVIGSVPVDKLCSSSAAS
TYCYPRGKLLDIYRKHKTVPSFDAIPDEMEHVSLITQVAAIEPLAFVAPDAEEEAVLWDI
WKGKIGSSGVLQNSFRDKNVPSSDDITGFDATSGGQVVALVLSDETIETVENAAVHISSQ
DNGAAGLDTSDSLAAVSKERDALIEGKEKFMTGTTDAVVHDGLISSIFNRQNICSAGETC
GLSNSVNDLKYSESQQRADLILSKHSKLGFIEPVTLDVGGQLPDDSSSLFDFTSLQKNSS
SDQLHLQGDDKAHSVDVLPPDPEDLSLFYLDPQGEIQGPYMGIDIIMWFEQGYFGTDLPV
RLSDAPAGSPFQELGEIMPHLKFKAASAPGTNLTATSQLSDAVGGTLEDSLAPSVSGSDF
KGSAVANDQQWVSTAASSINYYSRVPNNENKSELHYADDKNFQNSVAQDEEIVFPGRPAS
SCGNQFRKSASDIHSSISSPASHHSLANEFSETTMPKHQDDDKLHPFGLLMSELKDSSHL
RRTQSSNMASGIGDQDQVMDSLLEREATFVNQSGFRMTADQPSFGESLSDDYRKNTHSKQ
NIHQGSVDAHHLLRREQTVNGFNLGEHIISQKLQNELQHHNLLSHHSSHATGLGIEEIPG
YALSQSKNLSLQRSGHPRLEMEQLLELQFPQQRHLELQQQRHLELQQQQHLELQQQRHLE
ELQQQRQLEELKQQRRLEELQQRRQLEELQQRRHLEELQQRHLEELQQQRHLEELQQLRN
IELQQQRHLELQQQQRLLQHQQQQQQQQQQQRLNQMKLLQQEQQQQFLWEQLLQHQISDP
VYGRLKADTMRDNPLDQVQLRMHLLHELQQNFQKGQFDPSMEQIIQAKIGQNAHRGQSAA
LLDLISQAKHRNMLSSEQQLHFQQDPLQGRQVLSLRQQLGLEGERRINGPWSVDEAGQFF
RNPADHHHVQSAGLNSSDFYQQHRRLSSPVEQFDPRHWNPAIQEQHQLGFFEPSSTALDR
SMNLDNVNACGQGLDFPDQHLYMHSSGQLGSLSSGVSSHSRHVSNEFYASYPGMIEHHSP
VNSGLLESNWIEKHIQQLNLKAEQQRKESDINMNAVNSSIWAPTTGDEENSKRAPMDHFH
QNLGHKSMQSSEDDYQHLISSSKTQETVWPVSETHSFNHPFSHLPDQEVSEISSFIEGPQ
NFNNGAKFKHAGNTERLIPRSSSGATMEQSFLSGIVEHPNSISKSAAESELQGLKGNRHG
SKGMSWSVSEIKDNLEETENSLDCGEQPSTAHSRQSSLSTSGGNGGYDIGSDKSVGEVSN
DRLPTMLPKGLDNDWNKRPTVTRVASSSQDEPTAAPIVKQKSSASLASDEGKRESVNNPV
GARVSETGKKDLRFRRTSSFSDAAVSETSFIDMLKKPVHPEADPSNGAAFESSDGAPSGR
GGKKKGKKGRQIDPALLGFKVSSNRIMMGEIQRLED
NT seq 5151 nt   +upstreamnt  +downstreamnt
atggctgacggaaagcttgatctgccggacgatctcctctccaccaaaacgttcgatcaa
cgccgctctgtcaaagatgaagcttggggcggcagtggtgacgagaagtcagctatgggg
ttacttgatgagtcaaaagttgctgatcaggcaacttcagacagcagcattcctttgtct
ccgcagtggctttatgctaaaccaattgatgccaagacatcaagtacaggagcatcaggg
gaaatgcgtgcaccaaattctttgcctcatggaaatgtcactgatcctaatctaaaagac
agttggcgtttagatggatctcaggataagaaagactggaggaagattgtgcctgatgtt
gaaagcaaccgccgttggcgtgaagaggagagagaaacgggcttacttggtagaagagat
cgcagaaaagaagatcgtcgtgctgatgccttatctaaggatatgtctgaaactagaccc
ctgtcttctacagatcgttggcatgattcccggagagatagcaagtggacttcaagatgg
ggtcctgaagataaagacaaggattctcgaaatgaaaaaaggacagatgttgagaaggaa
gatattcagattgacagacaatcttttgtcagtgggaatcgcccagcctctgagcgtgac
aatgactctcgtgataagtggaggccacgccatcgtatggaagctcatgctggtggttcg
gctgcatatcgctctgcaccaggatttgggccagagaggggacggatggaaggctcaaat
gtgcgatttgcagcaggacgtggaaggtctggtaataatggaatcacaggcagatcccct
tctgtatctgttattggttctgttcctgtagataaattatgcagctcctctgctgccagt
acatattgctaccctagaggaaagcttcttgacatttatcgcaagcataagactgttccg
agttttgatgccatacctgatgagatggaacacgtgtcactgataacacaagtagcagcc
attgagccattggcttttgttgctcctgatgcagaggaagaggctgttctttgggacata
tggaaaggaaaaatcggaagcagtggtgtgttgcagaattcatttagggacaaaaatgtg
ccatctagtgatgatattacaggttttgatgccacgagtggaggacaagtggttgctttg
gtgctgtctgacgaaactattgaaactgttgaaaatgctgctgtacatatttcttctcaa
gataatggagctgcgggactagatacatctgattcactggcagctgtttccaaggaaagg
gatgctttgatagaaggcaaagagaagtttatgacaggaacaactgatgcagttgtacat
gatggcttgataagttcaatttttaacagacaaaatatctgcagtgcaggggagacttgt
ggtctgagtaatagtgtgaatgatctgaaatattctgaaagccaacaacgagcagatttg
attctgtcaaagcattctaagttagggtttattgagccagttactttagatgttggtggc
cagcttcctgatgattcaagttctctatttgattttacatccctccagaaaaattcaagt
agtgatcagcttcatcttcaaggcgatgacaaggctcattcagtggatgtcttacctcca
gacccagaggatttaagcttgttttatcttgatcctcaaggagaaattcagggaccatat
atgggaattgatatcattatgtggtttgagcaaggctattttggaaccgatttacctgtt
cggttgtcagatgcccctgctggatcaccctttcaagaacttggtgaaattatgccacat
ctaaaatttaaagctgcgtctgcccctggtactaatctaactgccacatcacagctatct
gatgctgttggaggtaccttggaagacagcctcgcccctagtgtttctggttctgacttt
aaggggtctgctgttgcaaatgatcaacagtgggtttcaactgcagcttcgagcattaat
tattattcaagagtgcctaataatgaaaataagtccgagttgcattatgctgatgataag
aacttccaaaattctgttgctcaagatgaagaaattgtcttccctgggaggcctgcaagt
agctgtggaaatcaatttaggaaatctgctagtgatattcacagttctatatcgagtcct
gctagccatcattcccttgctaatgaattttctgaaactaccatgcctaaacatcaggat
gatgataaattgcatccttttggccttttgatgtctgagctcaaagacagctctcacttg
aggcgtactcagtcatcaaatatggcctcaggcataggtgatcaggatcaggtcatggat
tctttacttgagagagaagccacatttgtcaatcagagtggttttcgtatgacggctgat
caaccctctttcggggagtccttgtctgatgattataggaaaaacacacattctaaacaa
aacattcatcaaggttctgtagatgctcaccacttgttgcgtagggagcaaacagtgaac
ggttttaatctgggagagcacataatatcacaaaagttgcaaaatgaactacaacatcac
aatctgttgtctcatcattcttcacatgccactggattgggaatagaggaaattcctggt
tatgctctttctcagagcaagaacctaagtctgcaacgttcaggccatccacgattagaa
atggaacaactattggaacttcaatttccacagcagcgacaccttgagcttcaacaacag
cggcaccttgagcttcaacaacagcagcaccttgagcttcagcaacaacggcatctcgaa
gaactccaacaacaaaggcaacttgaagaactcaaacagcagaggcgacttgaagaactc
caacaacggaggcaacttgaagaactccaacaacggaggcatcttgaagaacttcaacag
cggcatcttgaagaactccaacaacagaggcatcttgaagaacttcagcaactgcgaaat
attgaacttcagcaacagaggcatcttgagcttcagcaacagcaacggttattgcagcat
cagcaacagcagcaacagcagcagcagcagcagcgtctcaaccaaatgaaattgcttcag
caagaacagcaacagcagtttctttgggaacagttattgcagcatcagatatctgatcct
gtttatggacggttgaaggcagatactatgagagacaacccgctcgatcaggttcagtta
aggatgcaccttctgcatgaacttcaacaaaactttcaaaaagggcagtttgatccatca
atggagcagattatccaagcaaagattggtcagaatgcacaccgaggacagtcagctgct
ttactagacctcatatcacaggcaaagcatcgaaatatgctttcttcagaacagcagctt
cattttcagcaagaccctttgcagggtcggcaagtattgtcattgaggcagcagttgggg
ttggagggggaaaggcgcatcaatgggccatggtcagtggatgaggctggtcaatttttt
aggaatcctgctgatcatcaccatgttcagtctgcaggccttaattcttcagatttttac
cagcaacatcggaggctttcctcacctgtggagcaatttgaccctcgtcattggaatcct
gctatacaagaacagcatcagctaggcttttttgaacctagctctacagctttggatagg
tcaatgaatttagataatgtgaatgcttgtggccaaggtttagatttcccagatcaacat
ctgtatatgcattcctctggccagcttggttctttgtcttcaggtgtctcttctcactcc
cgtcatgtttctaatgagttttatgcttcttatccaggcatgatagagcaccactcccca
gtgaatagtgggctgctagaaagtaactggattgagaaacatattcaacagttgaatctt
aaagctgaacagcaaagaaaggagtcagatattaatatgaatgctgtgaattcaagtata
tgggcacccaccacaggtgatgaggagaattcaaagcgagctccaatggaccatttccat
caaaacttgggtcataaatctatgcagtcatcagaagatgattatcaacatcttatatca
tcttctaaaactcaggaaactgtttggccagtttctgagacacactcttttaatcatcct
tttagtcatctaccagatcaagaagtcagtgagattagctcctttattgaaggccctcaa
aatttcaataacggtgcaaaatttaagcatgcaggaaacactgaaagattgatcccaaga
tctagttctggagcaacaatggaacagtcattcttgtcaggcattgtagaacatcctaac
tctatcagtaaatcagctgcggagtctgaactgcaagggctgaaggggaacagacatggg
tcaaaaggcatgagttggtcagtttcagagatcaaggataacttggaggaaacagaaaat
tcgctggattgtggggagcaacctagtactgcccatagtaggcagagctcgcttagtact
tctggtggaaatggaggctatgatattggatcagataagtcagtcggagaagtttctaat
gacaggctacccaccatgttacccaaagggcttgacaatgattggaacaaacgcccaact
gtaacaagagttgcttcatcttcccaggatgagccaactgctgctccaattgtcaagcag
aaaagttcagcttcccttgcatctgatgaaggaaagcgggaatctgttaataatccagta
ggagccagagtctctgaaactggcaagaaagatctgcgatttaggaggacctcatctttc
agtgatgcagcagtctcggagacatcattcatagacatgcttaagaaaccagttcatcca
gaagcagatccatcaaatggggctgcttttgagtcatctgatggtgcaccaagtgggcgg
ggtggcaaaaagaaaggaaagaaaggaaggcagatagatcccgctctccttggatttaaa
gtttctagcaaccggatcatgatgggtgaaattcagcgccttgaagattga

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