KEGG   Citrus x clementina (clementine): CICLE_v10014033mg
Entry
CICLE_v10014033mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K27498  focadhesin
Organism
cic  Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:cic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cic03019]
    CICLE_v10014033mg
Messenger RNA biogenesis [BR:cic03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     CICLE_v10014033mg
SSDB
Motif
Pfam: DUF3730
Other DBs
NCBI-GeneID: 18051051
NCBI-ProteinID: XP_006446569
UniProt: V4W1P4
LinkDB
Position
Unknown
AA seq 1543 aa
MTSAELDHLRHRYKIPSCVELRLPEPEEAMENPQYGFGGATCDLSEELLLIFPILNLMSS
PSKSVKGVASDLLVLLEKLLVKLLAAPKMEVAMNAGNPSIIGFGSIIFRLLKNLWFQDQN
STSGSFFLSLISTGNYRIEEMDEGPGPWTSQLRELLLCIIDSKKSSLPVSASQEALSTEM
SMLLGAIASVLVIHPSLGSSAVDAFATVGKMDPKLGVPLLLAILFYSNMFTRKDVVCQNK
LPKLLGMLPSIASQSVMIPLVVQTILPMLHKNAKPVLYATATRLLCQTWEINDRAFGSLQ
GVLQPKLLIDFKSERNICISIAASIHDVCRKDPDRGVDLILSVAACIESRDPIIQALGLQ
SLAYLCEADVIDFYTAWDVIAKHVLDYSLDPMLAQSLCILLRWGAMDAEAYSEASRTVLK
ILLDTGTTTHLGHELQWAKARASAFEALTQYEVSHIDKNILDFKQRSFEILISETNPVVL
RAMEGFQVKIITHEHSNRRRFVKEKKVPGSKIEKLLDIFPRVIFSSDKKFYARELPGAAL
LCLSFTRKDLRNQGEARGLQNVLSGYENALIDIAASFQLSRNIFVALLSLQSWKFFMQRW
VRAIIMSIDAKAESIVPDRTFKAANDILKTLMRVAEESMPRSAENIALAIGALCSVLPQS
AHTIKSTASKFLLSWLFQHEHEHRQWSAAISIGLISSSLHVTDHKQKFQNITGLLEVLCS
SRSILVRGACGIGLGFSCQDLLTWAAAADGTNLDKETYKIEEMELLGRTVKALSMMIFQL
APSSSKILEGLSAHFPVKTCDVKMNVTSEFSDDGLEDDIWGVAGLVIGLASSISVIYRAG
KHDVVLKIKDLIVSWIPHVNSLVENYGSGGERSEIVLSVGSSLALPIIVAFCRGVELMDD
KELNHLVHGYRELISELLSVNKSGNFHKSLLMASCVGAGSLLACIVNEGAHSLNVDHVNA
FLELFRKCYSNPYPPIIHLGGMLGVVNALGAGAGYLIHVDPLNSSMRAGYAQKEHPYTLG
PLFSDPVCEQHVTSLMQEMFLVAQTSDDHQLQQYAAWAMSFLRCHLWSKELLNTDNNIKA
DLLGSKSVSQRFSDDNVVMKLGLWLSHLNYSGTDATARVVTVSTILRCLTRAPRLPTLDW
GAIIRCCMRYEAQIAKGLPPDSAYKRGILREECIQFSLAHANQFHPLLSFLDELSDLPRF
KTLELNLQATLLFHLADLIKLFSGSRLEKLFDDMADYLFSVTSYQAYNPDQKSFLRVSFW
NGLHRCLEEASLDSLEHIPNMERCMEVLFALLPASQYAAIIGVNQKNLVEEWSAAVRCLG
KARREWVLDFLQVLHVNPLQGDVQLSEVVKKMQAKAKLVRIGSFPLTELGKLKAYILNFK
SLGVWDVLIEVVAALQHAEEGVRRQWLVDTIEISCVSCYPSTALQFVGLLSGSCCRYMPF
LILDSSTVLNDLPVTLPSLLSKPGWETVAEPFMSYLWASTERIYNWVVTDVTSSQSSPST
QPIDESENDMAALLLHVMHRACISLKDYLPLEKQLRLSNMLVR
NT seq 4632 nt   +upstreamnt  +downstreamnt
atgacttcggctgaattagatcatcttagacatcggtataagattccttcctgcgttgaa
cttaggcttcctgagcctgaagaagccatggagaacccgcaatatgggtttggtggagct
acatgtgatcttagtgaggagctattgttgatatttcccatcctaaaccttatgtcgtcc
ccttctaagtcagttaaaggagtggcaagtgatttgcttgttttgttggagaagcttttg
gtgaaattgttggcagcaccaaagatggaagtggccatgaatgcagggaatccatccatc
attggatttggatctattatttttaggcttttgaaaaatctatggtttcaggatcaaaat
tcgacgtcaggttctttctttctcagtttgatttcaacaggaaattatcgcatcgaagaa
atggatgaagggccaggaccttggacttctcaactaagagaacttttgctatgcattatt
gatagcaaaaaatcctccctacctgtctctgcatctcaagaggctttatctactgaaatg
tccatgttacttggtgccattgccagtgttttggtgatacatccatcattgggaagttct
gctgtagatgctttcgctactgttggcaagatggatcctaaactgggagttccattgttg
ctggccattttgttttacagtaatatgttcaccagaaaagatgttgtgtgccagaataag
ttgccaaagcttttgggaatgcttccatcaattgcttcacagtccgtcatgattcctctt
gtagttcaaaccatcttgccaatgctgcataaaaatgcaaagccagttttatatgctaca
gccactcgcttgctctgtcagacctgggagatcaatgatcgcgcctttgggagtttgcaa
ggagtattacagccaaaattgctcattgacttcaagtctgagagaaacatttgtataagc
atagctgcttctattcatgatgtttgcagaaaagaccctgataggggagtggatcttatc
ttgtctgttgcggcttgcattgagagccgtgatccaataattcaagctcttggtttacag
agccttgcttatctttgtgaagctgatgttattgatttttatactgcctgggatgtcatt
gcaaagcatgtgctagactactccctggatccaatgcttgcccaaagcttatgcattctt
ctaagatggggagcaatggatgcagaagcttattcagaagcttcaaggactgttctgaag
attttgttggatactggtaccactacccatctaggccatgagttacaatgggcaaaggct
agagcctctgcctttgaggccttgactcaatatgaggtctcacatattgataaaaatatt
ttagatttcaagcaaaggagctttgagattcttatttcagagacaaacccagttgtactc
agggcaatggaaggatttcaagtcaagattataacacatgagcatagcaatcggcgaaga
ttcgtgaaggagaaaaaagtacctggaagtaagattgagaaattactggatatttttcct
cgggttatcttctcttcagacaagaaattttatgccagagagttacctggtgcagccctg
ttatgtctttccttcacgcgcaaagatttgaggaaccaaggggaagcaagaggattacaa
aatgtactttctggatatgagaatgcattgatcgatatagcggcttcatttcagctctca
agaaatatttttgtcgcacttctttcattgcaatcatggaaatttttcatgcaacgctgg
gtcagagctattattatgtccattgatgctaaagcagaatccattgtgccagatagaact
tttaaagctgccaatgatattttgaagactttgatgcgagtggcagaagaatctatgcct
agatctgctgaaaatattgcactggctattggtgctctgtgttcggtattgcctcagtca
gctcatactattaaatcaacagcttcaaagtttctattaagttggttgtttcagcatgaa
catgaacaccgccagtggtctgctgcaatttccattggattgatctcaagctctttacat
gtaactgaccataagcaaaaatttcagaacatcactggacttttggaggttttgtgtagt
agcagaagcatccttgttagaggagcctgtgggattggcttgggattttcatgccaagat
cttctaacctgggctgcagctgctgatggcactaacttggacaaggaaacctacaagata
gaagaaatggaattactgggaaggacagtgaaagcgttatctatgatgatattccagcta
gctccctcttcatctaaaattctagaaggtctctctgctcattttcctgtgaagacttgt
gatgtaaagatgaatgtaacttctgaattttcggatgatggcttggaggatgacatatgg
ggtgttgctggacttgtcattggtttagcaagctccattagtgtaatatacagagctggg
aaacatgatgttgtgctgaagataaaagacttaattgtttcctggattcctcatgtaaat
tctctggtcgaaaattatggttctggaggtgaaagatctgagatagttttatctgttgga
tcctctttggcacttcccattatagtggctttctgtcgaggagtagaattgatggatgat
aaagaactgaaccatcttgtgcatggctatagggaacttatctctgagttattatctgtt
aataaatctggcaactttcataaaagccttctgatggcatcatgtgttggagctggaagc
cttcttgcctgcattgtcaatgaaggggcgcattctttaaatgttgatcacgtaaatgct
tttctagaattgtttagaaaatgttactctaatccttaccctcctatcatccatctgggt
gggatgcttggagttgttaatgctttgggagcaggcgctggatatcttatacatgttgat
cctttgaactcatctatgcgtgctggatatgcacaaaaggaacatccttataccctgggt
cctctcttttcagatcctgtttgtgaacaacatgtgacatcattgatgcaagagatgttt
cttgtggctcaaacttctgatgaccatcaactgcagcagtatgcggcatgggcaatgtca
tttcttcgatgtcatctttggtcaaaagaactactaaatactgacaacaatatcaaggct
gatttattaggttcaaaatctgtttctcaacgtttctccgacgacaatgtggtcatgaag
cttggtctgtggttaagccatcttaattattctgggacagatgccactgcacgtgttgta
acagtatcaactattttacggtgtcttacacgagcacccagactgccaaccttggattgg
ggagcaattatcagatgctgcatgagatatgaggcccagattgctaagggattgccacca
gactctgcttataagagaggaatccttagagaggaatgtatacagttttcactagctcat
gccaaccaatttcatccgcttctatctttccttgatgaactgtctgatctacctaggttc
aaaacacttgagctgaacttacaggcaactttgctcttccatttggcggacctgataaaa
ttgttctcaggttcaaggcttgagaaactatttgatgatatggcagactatttattttca
gttacttcgtaccaagcgtataatcctgatcagaaaagcttcctacgagtttcgttttgg
aatggtctccatcgttgtttggaagaagcttctcttgactctctagagcacattcctaac
atggaaaggtgcatggaggttctttttgccttgttgcctgcatcacaatatgctgccatc
ataggagtgaatcaaaagaatctggtggaggagtggtctgcggcagttagatgcctaggg
aaggctcgacgagaatgggtattggactttctgcaggttttacatgtgaatccattgcaa
ggagatgtccagttgagtgaggtggtgaaaaagatgcaagcaaaagccaagctagttaga
attggttccttcccattgactgagctcggaaagctaaaagcttacatattgaacttcaaa
tcacttggtgtctgggacgtacttattgaagttgttgctgctctgcaacatgcagaagaa
ggtgtcagaagacagtggcttgttgacaccatcgaaattagctgcgtttcatgttatcct
tcgacggcactgcagtttgttggtcttctctccggtagctgctgcagatatatgcctttt
ctgattctggactcttctaccgtgttgaatgatctaccagtgaccctcccttctcttcta
tcaaaacccggttgggaaactgttgcggaaccattcatgtcttatctttgggcatcaact
gaacgcatttataattgggtggtaactgatgtaacctccagtcagtcatcacctagcaca
caaccaattgatgaaagtgagaatgacatggctgctcttttattacatgtgatgcaccgt
gcctgcatatctttgaaagattacttgcctcttgaaaagcagcttaggctcagcaatatg
ttggtcaggtga

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