Citrus x clementina (clementine): CICLE_v10014036mg
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Entry
CICLE_v10014036mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K14312
nuclear pore complex protein Nup155
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CICLE_v10014036mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v10014036mg
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CICLE_v10014036mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
18052363
NCBI-ProteinID:
XP_006448165
UniProt:
V4UB73
LinkDB
All DBs
Position
Unknown
AA seq
1492 aa
AA seq
DB search
MSSEEEILMRDVTNAGLVVSDRIGREVASQLDVEEALEASRYASHPYTTHPREWPPLVEV
VDTWDLPTVLVERYNAAGGEGNALCGIFPEIHRAWASVDNSLFLWRFDKWDGQCPEYTGE
EQVICAVGLAKSKPGIFVEVIQYLLILATPVELILVGVCCSGAGDGTDPYAEISLQPLPE
YTVPSDGVTMTCVTCSDKGRILLAGRDGNIYELLYTTGSGWYKRCRKVCHTAGVGNVISR
WIVPNVFRFGAVDPIVELVFDNERQLLYARTEEMKLQVFVLGPNGDGPLKKVAEERNLFN
QRDTHHGGRQTTGQRAPHRSTKPSVVSISPLSTLESKWLHLVAVLSDGRRMYLSTSASSG
NSGTVGGVGGFNNHHFRPSCLKVVTTRPSPPLGVGGGLGFGAISLAGRNQSDDISLKVET
AYYSAGTLVLSDASPPTMSSLIIVSKDPSSQSYPTGSLGTSARISRALRESVTSLPVEGR
MLSVTDILPLPDTATTVQSLYSELEFCGFEISGESCEKSSGKLWARGDLSTQHILPRRRI
VVFSTMGMMEVVFNRPVDILRRLFELNSPRSILEDFFNRFGAGEAAAMCLMLAARIVHSE
NLISNAVAEKAAEAFVDPRLVGMPQLEGSNALANTRTAAGGFSMGQVVQEAEPVFSGAYE
GLCLCASRLLFPLWELPVMVMKGDAISENGVVVCRLSSGAMQVLENKIRSLEKFLRCIRN
QRRGLYGYVAGMGDLSGSILYGTGADSVAGDQSLIRNLFGSYSRNADSNGAGTSTKRQRL
PYSPAELAAIEVRAMECIRQLLLRSAEALFLLQLLSQHHVTRLVQGFDANLRQELVQLTF
CQLVCSEEGDRLATRLISALMEYYTDPDGRGTVDDISGRLREGCPSYFKESDYKFFLAVE
CLERAAVTSDSEEKENLAREAFNFLSKVPESADLRTVCRRFEDLRFYEAVVRLPLQKAQA
LDPAGDAFNDQIDAATREYALVQRQQCYEIITSALRSLKGDSSQREFGSPVRPAGPRSAL
DPASRKKYICQIVQLGVQSPDRIFHEYLYRTMIDLGLENELLEYGGPDLVPFLQSAGREP
IQEVRAVSGITSAASLMGQTGTPIPSNEAKYFDLLARYYVLKRQHLLAAHVLLRLAERRS
TDEKDAPTLDQRRQYLSNAILQAKNATNSDSLVGSTRGAFDNGLLDLLEGKLAVLRFQTK
IKEELEAIASSLETSVDMSESTQNGSAPDSSSTTDANYAKIVREKAKELSLDLKSITQLY
NEYAVPFELWEICLEMLYFANYTGDADSSIIRETWARLIDQALSKGGIAEACSVLKRVGS
HMYPGDGAVLPLDTLCLHLEKAALERLDSQVESVGDEDIARALLAACKGAAEPVLNTYDQ
LLSSGAILPSPNLRLRVLRSVLVVLREWAMSVFAKRMGTSATGASLILGGTFSADQTTVI
NQGIRDKITSAANRYMTEVRRLPLPQSQTGAVYRGFRELEESLISPFPLDRF
NT seq
4479 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcagaggaggagattctgatgcgcgacgtgacgaatgcgggcctcgttgtgagc
gaccgcattggacgggaagttgcgtctcagcttgatgtggaagaggctctggaagcttcc
agatacgccagccacccctacacgactcaccctagagagtggcctcctttagttgaggtg
gtagatacatgggacttgcctactgtgcttgttgagaggtataatgcggctggtggtgaa
ggaaatgctttatgtggaatatttccggagatacacagggcgtgggcatcagtggataat
tctttgtttctttggcgttttgacaagtgggatggtcaatgtcctgaatatactggggag
gaacaagttatttgtgccgttggtctcgccaaatctaaacctggcatttttgtagaagtt
atccaataccttttaattttagcaacaccagttgagttgattcttgtaggagtatgctgc
tcaggagcaggtgatggtacagatccttatgcggagatttcactgcagcctttgcctgaa
tacacagtaccatcagatggggtcaccatgacttgtgtaacatgctctgataaggggcgt
attctcctagccggccgtgatggcaacatttatgagttgctgtacaccactggttcaggc
tggtataagcgttgccgtaaagtttgccatactgcaggtgttggaaatgtcatctcaagg
tggattgtgccaaatgtatttagatttggagctgttgaccccattgttgaactggttttt
gacaatgaaagacagcttctgtatgcacgaactgaggagatgaaacttcaggtttttgtt
ttgggcccaaatggagatggtcccctgaagaaggtggctgaagaaaggaacctgttcaat
cagagagatacccatcatggaggtagacaaacaacgggacaaagagccccccatcggtca
accaagccatctgtagtatccatttcacctttgtccactcttgaatcgaagtggctgcac
cttgttgctgttttgtcagatggaagaaggatgtacctttccacttctgcatctagtggt
aacagtggcactgttggtggtgtgggtggattcaacaatcaccattttaggccaagctgt
ttaaaagttgtaactactaggccttctccacccttaggggttggtggagggcttggcttt
ggagctatatctctagctggcagaaatcagagtgatgatatctccttaaaggttgaaact
gcatattattcagctggaacccttgtcctttctgatgcatcaccaccaaccatgtcttct
cttataattgtcagcaaggaccccagttcacagtcatatccgacaggtagtttagggaca
agtgctaggatttctcgtgcgcttagggaatctgtgacttctttacctgttgaaggccga
atgctttctgtgacagatattctacccttaccggacacagctaccactgttcaatctcta
tactcagaacttgaattttgtggatttgaaatctccggggagtcctgtgaaaagtcatct
ggaaaactttgggctagaggtgacctttcaacccaacatatacttccaaggaggagaatt
gttgtttttagtactatgggcatgatggaagtagtattcaacaggcctgttgatattctg
agaagattgtttgagttgaactctccaagatcaattttagaagacttttttaatcgtttt
ggagctggcgaggcagctgcaatgtgtttgatgttagctgctaggatagttcattctgaa
aatcttataagcaatgccgttgccgagaaggctgccgaagcttttgttgacccaaggctt
gttgggatgccacaacttgaaggtagtaatgcattggcaaacactaggacagcagcaggg
ggattcagcatggggcaggttgttcaagaagctgagcctgtattttcaggtgcatatgaa
gggctctgcctgtgtgcgtcaaggctgctatttcctctttgggaacttcctgtaatggtc
atgaaaggagatgccatatctgaaaacggggtcgttgtatgtagactttcttctggggct
atgcaagtgcttgaaaacaagattcgttctttggagaagtttttaaggtgtataaggaac
cagagaaggggactttatggctacgtagccggtatgggggacttgagtggttctattctg
tatggaactggtgcagattcagttgctggtgatcagagtctaattagaaatttatttggt
agttactcacgaaatgctgactcgaatggtgctgggacatcaactaaaagacaaagatta
ccatatagtcctgctgaattggctgcaatagaggtgagggcaatggaatgcatcaggcag
ttgcttcttagatctgctgaagctttgtttttgctccagcttctttctcagcatcatgtg
acgcggttggttcaagggtttgatgctaatttgcggcaggaattggttcaactgacattt
tgtcaactagtttgttcggaggagggtgaccgtcttgctacaaggcttatttctgctttg
atggagtattatactgatcctgatggaaggggcacagtagatgatattagtgggcgactt
agagaggggtgtccaagctatttcaaggaatctgattacaagttctttttagcggtggaa
tgtcttgaaagggcagctgtaacgtcagactctgaggagaaggagaatcttgctagagag
gccttcaatttcttgagtaaggtccctgagtctgcagatttacgaactgtttgcagacgg
tttgaggacttaagattttatgaggctgtggttcgcttacctctgcaaaaggcacaggct
cttgacccagctggtgatgctttcaatgatcaaattgatgcagcaactcgagaatatgca
cttgttcagcgtcaacaatgctatgagataataaccagtgctttgcgatctctgaaaggt
gactcttcacagagggaattcgggtctcctgttagacctgctggaccacggtctgccctt
gatccagcttcacggaagaaatatatatgccagattgttcagcttggtgtccagtcacct
gatagaatatttcatgagtacctttatcgaacaatgattgatttgggccttgaaaatgaa
ctgttggagtacggaggtcctgatttggtgccttttctgcaaagtgctggtcgcgagccc
atacaagaggttcgagctgtctctggaataacatcagcagcttctttgatgggtcaaaca
ggaacacctatcccatctaatgaagccaaatactttgatcttttggcacgatattatgtc
ttgaaacgacaacatttacttgcagctcatgtgttgctaaggcttgctgagagaagatca
actgacgagaaagatgctcctactcttgatcagaggcgtcaatacctaagcaatgccatt
ttacaggccaagaatgcaaccaacagtgacagtctggtgggttcaactcggggtgctttt
gataatggattgttagatttacttgaagggaagcttgctgtccttcggttccaaacaaaa
atcaaagaggaactggaggctatagcttccagtttagaaacctcagttgatatgtctgag
tctactcaaaatggatcagcccctgatagcagttcaacaactgatgctaactatgcaaaa
attgtgcgagagaaagccaaagagctgtcattagatttaaagagcatcactcaactgtat
aatgaatatgcagtgccatttgaactttgggagatatgtctggaaatgctatactttgca
aactatactggggatgctgatagtagtattattagagaaacttgggctagactaattgat
caggctctttcaaagggtggcattgctgaagcgtgttctgtactgaagagggttggttcc
catatgtatcctggggatggagccgttttacctctggatactctatgccttcaccttgaa
aaggctgcactggagagattagattcacaggttgaatctgttggagatgaagatatagca
agggctcttctggctgcttgtaaaggagccgcagaacctgttttgaacacttatgatcag
ttattatccagtggagctattttgccgtcaccaaacctcaggttacgcgttcttcgatca
gtgctcgtggtacttagagagtgggcaatgtctgtatttgcaaaaagaatgggtacaagc
gctacaggagcatctttaatattaggtggaacattttcagcggatcaaacaacagtcatt
aaccaagggattcgagataagatcaccagtgctgcaaacaggtatatgacggaggtgcgt
aggttgcctttgccacagagccagacaggggctgtttaccgaggatttcgagaactcgaa
gagtccctaataagtccctttcctttggatcgattttga
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