KEGG   Citrus x clementina (clementine): CICLE_v10014036mg
Entry
CICLE_v10014036mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K14312  nuclear pore complex protein Nup155
Organism
cic  Citrus x clementina (clementine)
Pathway
cic03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cic00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    CICLE_v10014036mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cic03019]
    CICLE_v10014036mg
Messenger RNA biogenesis [BR:cic03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     CICLE_v10014036mg
SSDB
Motif
Pfam: Nucleoporin_C Nucleoporin_N
Other DBs
NCBI-GeneID: 18052363
NCBI-ProteinID: XP_006448165
UniProt: V4UB73
LinkDB
Position
Unknown
AA seq 1492 aa
MSSEEEILMRDVTNAGLVVSDRIGREVASQLDVEEALEASRYASHPYTTHPREWPPLVEV
VDTWDLPTVLVERYNAAGGEGNALCGIFPEIHRAWASVDNSLFLWRFDKWDGQCPEYTGE
EQVICAVGLAKSKPGIFVEVIQYLLILATPVELILVGVCCSGAGDGTDPYAEISLQPLPE
YTVPSDGVTMTCVTCSDKGRILLAGRDGNIYELLYTTGSGWYKRCRKVCHTAGVGNVISR
WIVPNVFRFGAVDPIVELVFDNERQLLYARTEEMKLQVFVLGPNGDGPLKKVAEERNLFN
QRDTHHGGRQTTGQRAPHRSTKPSVVSISPLSTLESKWLHLVAVLSDGRRMYLSTSASSG
NSGTVGGVGGFNNHHFRPSCLKVVTTRPSPPLGVGGGLGFGAISLAGRNQSDDISLKVET
AYYSAGTLVLSDASPPTMSSLIIVSKDPSSQSYPTGSLGTSARISRALRESVTSLPVEGR
MLSVTDILPLPDTATTVQSLYSELEFCGFEISGESCEKSSGKLWARGDLSTQHILPRRRI
VVFSTMGMMEVVFNRPVDILRRLFELNSPRSILEDFFNRFGAGEAAAMCLMLAARIVHSE
NLISNAVAEKAAEAFVDPRLVGMPQLEGSNALANTRTAAGGFSMGQVVQEAEPVFSGAYE
GLCLCASRLLFPLWELPVMVMKGDAISENGVVVCRLSSGAMQVLENKIRSLEKFLRCIRN
QRRGLYGYVAGMGDLSGSILYGTGADSVAGDQSLIRNLFGSYSRNADSNGAGTSTKRQRL
PYSPAELAAIEVRAMECIRQLLLRSAEALFLLQLLSQHHVTRLVQGFDANLRQELVQLTF
CQLVCSEEGDRLATRLISALMEYYTDPDGRGTVDDISGRLREGCPSYFKESDYKFFLAVE
CLERAAVTSDSEEKENLAREAFNFLSKVPESADLRTVCRRFEDLRFYEAVVRLPLQKAQA
LDPAGDAFNDQIDAATREYALVQRQQCYEIITSALRSLKGDSSQREFGSPVRPAGPRSAL
DPASRKKYICQIVQLGVQSPDRIFHEYLYRTMIDLGLENELLEYGGPDLVPFLQSAGREP
IQEVRAVSGITSAASLMGQTGTPIPSNEAKYFDLLARYYVLKRQHLLAAHVLLRLAERRS
TDEKDAPTLDQRRQYLSNAILQAKNATNSDSLVGSTRGAFDNGLLDLLEGKLAVLRFQTK
IKEELEAIASSLETSVDMSESTQNGSAPDSSSTTDANYAKIVREKAKELSLDLKSITQLY
NEYAVPFELWEICLEMLYFANYTGDADSSIIRETWARLIDQALSKGGIAEACSVLKRVGS
HMYPGDGAVLPLDTLCLHLEKAALERLDSQVESVGDEDIARALLAACKGAAEPVLNTYDQ
LLSSGAILPSPNLRLRVLRSVLVVLREWAMSVFAKRMGTSATGASLILGGTFSADQTTVI
NQGIRDKITSAANRYMTEVRRLPLPQSQTGAVYRGFRELEESLISPFPLDRF
NT seq 4479 nt   +upstreamnt  +downstreamnt
atgtcgtcagaggaggagattctgatgcgcgacgtgacgaatgcgggcctcgttgtgagc
gaccgcattggacgggaagttgcgtctcagcttgatgtggaagaggctctggaagcttcc
agatacgccagccacccctacacgactcaccctagagagtggcctcctttagttgaggtg
gtagatacatgggacttgcctactgtgcttgttgagaggtataatgcggctggtggtgaa
ggaaatgctttatgtggaatatttccggagatacacagggcgtgggcatcagtggataat
tctttgtttctttggcgttttgacaagtgggatggtcaatgtcctgaatatactggggag
gaacaagttatttgtgccgttggtctcgccaaatctaaacctggcatttttgtagaagtt
atccaataccttttaattttagcaacaccagttgagttgattcttgtaggagtatgctgc
tcaggagcaggtgatggtacagatccttatgcggagatttcactgcagcctttgcctgaa
tacacagtaccatcagatggggtcaccatgacttgtgtaacatgctctgataaggggcgt
attctcctagccggccgtgatggcaacatttatgagttgctgtacaccactggttcaggc
tggtataagcgttgccgtaaagtttgccatactgcaggtgttggaaatgtcatctcaagg
tggattgtgccaaatgtatttagatttggagctgttgaccccattgttgaactggttttt
gacaatgaaagacagcttctgtatgcacgaactgaggagatgaaacttcaggtttttgtt
ttgggcccaaatggagatggtcccctgaagaaggtggctgaagaaaggaacctgttcaat
cagagagatacccatcatggaggtagacaaacaacgggacaaagagccccccatcggtca
accaagccatctgtagtatccatttcacctttgtccactcttgaatcgaagtggctgcac
cttgttgctgttttgtcagatggaagaaggatgtacctttccacttctgcatctagtggt
aacagtggcactgttggtggtgtgggtggattcaacaatcaccattttaggccaagctgt
ttaaaagttgtaactactaggccttctccacccttaggggttggtggagggcttggcttt
ggagctatatctctagctggcagaaatcagagtgatgatatctccttaaaggttgaaact
gcatattattcagctggaacccttgtcctttctgatgcatcaccaccaaccatgtcttct
cttataattgtcagcaaggaccccagttcacagtcatatccgacaggtagtttagggaca
agtgctaggatttctcgtgcgcttagggaatctgtgacttctttacctgttgaaggccga
atgctttctgtgacagatattctacccttaccggacacagctaccactgttcaatctcta
tactcagaacttgaattttgtggatttgaaatctccggggagtcctgtgaaaagtcatct
ggaaaactttgggctagaggtgacctttcaacccaacatatacttccaaggaggagaatt
gttgtttttagtactatgggcatgatggaagtagtattcaacaggcctgttgatattctg
agaagattgtttgagttgaactctccaagatcaattttagaagacttttttaatcgtttt
ggagctggcgaggcagctgcaatgtgtttgatgttagctgctaggatagttcattctgaa
aatcttataagcaatgccgttgccgagaaggctgccgaagcttttgttgacccaaggctt
gttgggatgccacaacttgaaggtagtaatgcattggcaaacactaggacagcagcaggg
ggattcagcatggggcaggttgttcaagaagctgagcctgtattttcaggtgcatatgaa
gggctctgcctgtgtgcgtcaaggctgctatttcctctttgggaacttcctgtaatggtc
atgaaaggagatgccatatctgaaaacggggtcgttgtatgtagactttcttctggggct
atgcaagtgcttgaaaacaagattcgttctttggagaagtttttaaggtgtataaggaac
cagagaaggggactttatggctacgtagccggtatgggggacttgagtggttctattctg
tatggaactggtgcagattcagttgctggtgatcagagtctaattagaaatttatttggt
agttactcacgaaatgctgactcgaatggtgctgggacatcaactaaaagacaaagatta
ccatatagtcctgctgaattggctgcaatagaggtgagggcaatggaatgcatcaggcag
ttgcttcttagatctgctgaagctttgtttttgctccagcttctttctcagcatcatgtg
acgcggttggttcaagggtttgatgctaatttgcggcaggaattggttcaactgacattt
tgtcaactagtttgttcggaggagggtgaccgtcttgctacaaggcttatttctgctttg
atggagtattatactgatcctgatggaaggggcacagtagatgatattagtgggcgactt
agagaggggtgtccaagctatttcaaggaatctgattacaagttctttttagcggtggaa
tgtcttgaaagggcagctgtaacgtcagactctgaggagaaggagaatcttgctagagag
gccttcaatttcttgagtaaggtccctgagtctgcagatttacgaactgtttgcagacgg
tttgaggacttaagattttatgaggctgtggttcgcttacctctgcaaaaggcacaggct
cttgacccagctggtgatgctttcaatgatcaaattgatgcagcaactcgagaatatgca
cttgttcagcgtcaacaatgctatgagataataaccagtgctttgcgatctctgaaaggt
gactcttcacagagggaattcgggtctcctgttagacctgctggaccacggtctgccctt
gatccagcttcacggaagaaatatatatgccagattgttcagcttggtgtccagtcacct
gatagaatatttcatgagtacctttatcgaacaatgattgatttgggccttgaaaatgaa
ctgttggagtacggaggtcctgatttggtgccttttctgcaaagtgctggtcgcgagccc
atacaagaggttcgagctgtctctggaataacatcagcagcttctttgatgggtcaaaca
ggaacacctatcccatctaatgaagccaaatactttgatcttttggcacgatattatgtc
ttgaaacgacaacatttacttgcagctcatgtgttgctaaggcttgctgagagaagatca
actgacgagaaagatgctcctactcttgatcagaggcgtcaatacctaagcaatgccatt
ttacaggccaagaatgcaaccaacagtgacagtctggtgggttcaactcggggtgctttt
gataatggattgttagatttacttgaagggaagcttgctgtccttcggttccaaacaaaa
atcaaagaggaactggaggctatagcttccagtttagaaacctcagttgatatgtctgag
tctactcaaaatggatcagcccctgatagcagttcaacaactgatgctaactatgcaaaa
attgtgcgagagaaagccaaagagctgtcattagatttaaagagcatcactcaactgtat
aatgaatatgcagtgccatttgaactttgggagatatgtctggaaatgctatactttgca
aactatactggggatgctgatagtagtattattagagaaacttgggctagactaattgat
caggctctttcaaagggtggcattgctgaagcgtgttctgtactgaagagggttggttcc
catatgtatcctggggatggagccgttttacctctggatactctatgccttcaccttgaa
aaggctgcactggagagattagattcacaggttgaatctgttggagatgaagatatagca
agggctcttctggctgcttgtaaaggagccgcagaacctgttttgaacacttatgatcag
ttattatccagtggagctattttgccgtcaccaaacctcaggttacgcgttcttcgatca
gtgctcgtggtacttagagagtgggcaatgtctgtatttgcaaaaagaatgggtacaagc
gctacaggagcatctttaatattaggtggaacattttcagcggatcaaacaacagtcatt
aaccaagggattcgagataagatcaccagtgctgcaaacaggtatatgacggaggtgcgt
aggttgcctttgccacagagccagacaggggctgtttaccgaggatttcgagaactcgaa
gagtccctaataagtccctttcctttggatcgattttga

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