Citrus x clementina (clementine): CICLE_v10014106mg
Help
Entry
CICLE_v10014106mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K10610
DNA damage-binding protein 1
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03420
Nucleotide excision repair
cic04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
CICLE_v10014106mg
09124 Replication and repair
03420 Nucleotide excision repair
CICLE_v10014106mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cic04121
]
CICLE_v10014106mg
03400 DNA repair and recombination proteins [BR:
cic03400
]
CICLE_v10014106mg
Ubiquitin system [BR:
cic04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
CICLE_v10014106mg
DNA repair and recombination proteins [BR:
cic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
CICLE_v10014106mg
TCR (transcription coupled repair) factors
Cul4-CSA complex
CICLE_v10014106mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
Beta-prop_RSE1_1st
CPSF_A
Motif
Other DBs
NCBI-GeneID:
18052597
NCBI-ProteinID:
XP_006448953
UniProt:
V4TNY8
LinkDB
All DBs
Position
Unknown
AA seq
1088 aa
AA seq
DB search
MSIWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPQGLQPMLDVPIYG
RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELITRAMGDVSDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVL
YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC
SANAFKAIPIRPSITKAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET
SIASTISYLDNAVVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE
RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS
FISETRILAMNLEDELEETEIEGFCSQTQTLFCHDAIYNQLVQVTSGSVRLVSSTSRELR
NEWKSPPGYSVNVATANASQVLLATGGGHLVYLEIGDGILTEVKHAQLEYEISCLDINPI
GENPSYSQIAAVGMWTDISVRIFSLPDLNLITKEHLGGEIIPRSVLLCAFEGISYLLCAL
GDGHLLNFLLNMKTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL
LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHPRRICH
QEQSRTFAICSLKNQSCAEESEMHFVRLLDDQTFEFISTYPLDTFEYGCSILSCSFSDDS
NVYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLIAEKETKGAVYSLNAFNGKLLAAIN
QKIQLYKWMLRDDGTRELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEGA
IEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHLG
EFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPHEQYLFLEKLQTNLRKVI
KGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRSRMDEISKTMNVSVEELCKR
VEELTRLH
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgagtatatggaactacgtcgttacggctcacaagccgacaaacgttactcactcttgc
gtcggcaatttcaccagcccgcaagaactcaatctcatcattgcgaaatgtacacgtatc
gaaatacatttgcttactcctcagggactacagcctatgttggatgtaccgatatatgga
agaattgcaacgcttgaacttttccgccctcatggcgaagcacaggattttctatttatt
gcaacagaaagatacaaattctgtgttcttcagtgggatgcggagtcatctgagctcatt
acaagagctatgggggatgtctctgaccgtataggccgtcctacagataatggtcagatc
ggaataattgatcctgattgcagattaattggactccatttgtatgatgggttgtttaag
gtcattccttttgacaataaaggccagctcaaagaagcatttaacattaggctggaggaa
cttcaagttctggatattaagtttctctatggttgtgcaaaaccaacaattgtagtgctc
taccaggataacaaagatgctcggcacgttaaaacatatgaagttgccctgaaggataaa
gattttgttgaggggccttggtctcagaataatctggacaatggggctgatttgctcata
ccagtacccccacctctctgtggcgtccttataattggagaagagacaattgtctattgt
agtgccaatgcttttaaagcaatcccaatcagaccttctatcacgaaagcctatgggaga
gttgatgctgatggttctagatatttactcggtgatcatgctgggcttcttcacctcctc
gtcataacccatgagaaagaaaaggttactggactcaaaattgagcttttgggcgaaact
tctattgcatctactatatcatatctggataatgcggttgtgtatattggctcaagctat
ggagattcacagcttataaaactaaatctacaacccgatgcaaaaggttcatatgttgaa
gttttggaaagatatgtcaatttggggccaattgtcgacttctgtgtggttgaccttgag
aggcaaggccaaggtcaggttgtaacctgctctggagcttacaaggatggttctctccgt
atagttcgaaatggaattggaattaatgagcaggcatcagtggaattgcaaggtattaaa
ggaatgtggtcactaagatcatctacagatgatccatttgataccttcttggtggttagt
tttatcagcgagacacgaattttggcaatgaatcttgaggatgagcttgaagaaactgag
atagagggtttctgttctcaaacgcagactttgttttgccatgatgctatctacaatcaa
cttgtgcaagtaacttcaggctctgtaagacttgtcagttctacatccagggagctgcga
aatgaatggaaatctccgcccggttattcagttaatgttgcaactgcaaatgcaagccag
gttttactagcaactggcggtggacatttagtttatttagaaattggtgatggaatattg
acagaagtaaagcatgcacagctggagtacgagatttcatgccttgacattaatcccatt
ggtgaaaatcctagctatagtcagatagctgcagttggaatgtggacagatattagtgtt
aggatattttcactccctgacctgaatctcatcactaaggagcatttgggtggagaaatc
atacctcggtcggttcttctttgtgcctttgaagggatttcttacttgttatgtgcactt
ggggatggccatctcttaaactttctattgaacatgaaaaccggtgagttgacagatagg
aagaaggtttctcttgggacccagcccataactctccgtaccttctcatccaagaatacc
acacatgtattcgctgcatctgataggccaactgtaatttatagcagtaacaagaagctg
ctttatagtaatgtaaatttgaaagaagttagtcatatgtgccctttcaactctgctgct
tttccagacagccttgcaattgcaaaagaaggcgagcttactattggcacaattgatgac
atccagaagcttcacatccgctctataccacttggggagcatccacggcgtatctgccat
caggaacagtcccggacttttgccatctgtagtttgaaaaaccagtcatgtgcagaagaa
tctgaaatgcactttgttcgtttgttagatgaccaaacatttgagttcatatcaacttac
ccacttgacacttttgagtatggctgctccatactcagttgttctttctctgatgatagt
aacgtttactactgtgttggtactgcatatgttctaccagaagaaaatgagccaacaaag
ggcaggatattggtttttattgtggaagatggaaagttacaactaattgcagagaaggaa
accaagggagctgtttactctttgaatgccttcaacggcaaattacttgctgccatcaat
caaaaaattcagttgtacaagtggatgctccgggatgatggtacacgtgagctgcaatct
gagtgcggacatcatggtcacatacttgccctctatgtacaaactcgtggagatttcatt
gttgttggtgatctgatgaaatcaatttctctgttgatctataagcatgaggaaggtgct
atcgaagagcgagcccgtgactacaatgcaaattggatgtcagctgttgaaattcttgat
gacgatatctacctaggtgctgaaaacaactttaacctcttcacagtgcggaaaaatagt
gaaggtgccacagatgaggaacgaggtcgtcttgaggtggttggcgaataccaccttgga
gaatttgtcaatcggtttcgccatggatcccttgttatgcgcttgccggactctgatgtg
ggccagatcccaactgtcatttttggaactgttaatggggtcattggggttattgcgtca
cttccacacgagcaatatctattcttagagaagctccagacaaacttgaggaaggtgatc
aagggagttggagggttgaatcatgagcaatggaggtcctttaacaacgagaagaaaact
gtagatgctaagaatttcctggatggtgatttaatagagtcatttcttgatctcagccga
agccgaatggatgagatttctaagacaatgaatgtttctgtggaggagctttgtaagaga
gttgaggaacttacgaggttgcattga
DBGET
integrated database retrieval system
