Citrus x clementina (clementine): CICLE_v10014186mg
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Entry
CICLE_v10014186mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v10014186mg
03036 Chromosome and associated proteins [BR:
cic03036
]
CICLE_v10014186mg
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
CICLE_v10014186mg
Chromosome and associated proteins [BR:
cic03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
CICLE_v10014186mg
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
CICLE_v10014186mg
microRNA pathway
RISC loading complex
CICLE_v10014186mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
TCAD9
Motif
Other DBs
NCBI-GeneID:
18050902
NCBI-ProteinID:
XP_006446389
UniProt:
V4W1B4
LinkDB
All DBs
Position
Unknown
AA seq
920 aa
AA seq
DB search
MDSFEPDGNGARDGNGAPDSLPPPPPVIPPDFVPTRVEEQEPAKKKVVRVPISRRGLGSR
GQRISLLTNHFKVNVTNVEGHFYHYSVSVSYEDGRPVDGKGAGRKVIDRVQETYNAELDG
KDFAYDGEKSLFTVGPLPRNKLEFTVVLEDISSNRNNGNASPDAHGSPNGNDRKRLRRPY
RSKTFKVEISFAAKIPIQAIANALRGQESENSQEAFRVLDIILRQHAAKQGCLLVRQSFF
HNDPKNFADVGGGVLGCRGFHSSFRTTQGGLSLNIDVSTTMIIQPGPVVDFLIANQNVRD
PFSIDWAKAKRTLKNLRIKTITSNQEYKITGLSEKLCKEQMFSLKQKNVKDDDGEVQELE
ITVYDYFVNNRNIDLRYSGDLPCINVGKPKRPTYIPLELCELVSLQRYTKALTNLQRASL
VEKSRQKPQERMSVLSNALKLSKYDNEPMLRSCGISISTNFAQVEGRVLPAPRLKFGNGE
DFSPRNGRWNFNNKKLVQPTKIERWAVVNFSARCDIRSLVRDLIKCGEMKGILIDQPFDV
FEESPQYRRSSPVVRVEKMFDEIQSKLPGAPQFLLCLLPERKNSDLYGPWKRKNLADFGI
VTQCMAPMRVNDQYLTNVLLKINAKLGGLNSLLAVEHSPSIPIVSKVPTIILGMDVSHGS
PGHSDIPSIAAVVSSRHWPLISRYRAAVRTQSPKVEMIDSLFKKVSDTEDEGIIRELLLD
FYTSSGKRKPEQIIIFRDGVSESQFNQVLNVELNQIIEACKFLDEKWSPKFAVIVAQKNH
HTKFFQSGSPDNVPPGTVVDNKVCHPRNYDFYLCAHAGMIGTSRPTHYHVLFDEIGFSSD
ELQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGSFMKFDDLSETSSSQGGMTSAGP
VPVPQLPRLQEKVCNSMFFC
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggattcctttgaacctgatggtaatggtgcccgtgatggaaatggagctcctgatagt
ttgccgcctccgcctcctgttattccacctgactttgttccaacccgagtggaagaacaa
gaaccagctaagaaaaaggtggtgagggttccaatatccaggcgtggccttggatccaga
gggcaaaggatatcactgctaacaaatcacttcaaggttaatgttactaatgttgagggt
cacttctatcactacagtgtttctgtgtcttatgaagatggtcgccctgttgatggtaag
ggtgctggaagaaaagttattgatagggtgcaggagacatataatgctgaattagatgga
aaagactttgcttatgatggggagaagagtttatttactgttggtcccctcccacgtaac
aagcttgagttcactgttgtgcttgaggatatttcgtctaacaggaacaacggaaatgct
agtcctgatgcgcatggaagtccaaacgggaatgacagaaaaagattacggcgtccatat
cgatccaaaacatttaaagtggaaattagctttgctgcaaaaattccaatacaggccatt
gcaaatgccctacgtggtcaggaatcagagaactcacaggaggcctttagggtactggat
attatattacggcagcatgctgcaaaacagggctgtctcctagttcgccaatcgttcttt
cacaatgatccaaaaaattttgctgatgtcggagggggagttcttggctgcagaggattc
cattcaagttttaggaccactcagggaggcttgtctttgaatattgatgtatcaactacc
atgataattcagccgggtccagtagttgattttcttattgccaaccaaaatgttagagat
cccttttcaattgactgggccaaggctaaacggacactaaaaaatctgaggattaagacg
attacctccaatcaagagtacaagataactggactgagtgagaaactgtgtaaagagcaa
atgttttcactgaagcagaagaatgttaaggatgatgatggtgaagtgcaggaactggaa
ataactgtttatgactattttgttaataatcgcaatatagatttgcgatattctggagat
ctaccatgcatcaatgttggtaaaccaaagcggccgacctatattcctcttgagctttgt
gaattggtgtccttacaacgttacacgaaagccctgaccaatctacagagagcatcacta
gtggagaagtcaaggcagaagccacaagaaaggatgagtgttttgtctaatgctctgaaa
cttagcaagtatgataatgagccaatgctgcgttcatgtggcatttctatcagtactaac
tttgctcaagtggaaggtcgtgtgctaccagctcctcggttaaaatttggcaacggagaa
gatttttccccacgaaatgggcggtggaatttcaataacaagaaattagtgcagccaact
aagatagaacgttgggccgtggtaaacttttctgcacgttgtgacattcgtagccttgtc
cgagatctgatcaaatgtggggaaatgaaaggaattctcatagatcagccatttgatgtg
tttgaagagagtccacagtataggcgttcctctcctgttgttagagtggagaagatgttc
gatgaaattcagtccaaactgcctggggctccacagttccttctttgtttgcttcctgag
aggaaaaactctgatttatacggtccttggaaacgaaagaatcttgccgactttggaatt
gtcactcagtgtatggctcctatgagggtcaatgaccagtatcttacaaatgttctcctt
aagattaatgctaagcttggtggattaaattcattgttggctgttgaacattccccttca
attcctattgtttcgaaggttcccaccatcatccttgggatggatgtatcccatgggtct
cctggacattcagatataccatctattgctgcggtagtcagttccaggcactggccctta
atatctcgctacagagcagctgtgcgtacacagtctccaaaagtcgaaatgattgattct
ttgttcaagaaagtatctgacactgaggatgaagggataataagagagcttttgttggac
ttctacactagctcagggaaaaggaaacctgaacagatcatcatattcagggatggtgtc
agtgaatcacagtttaatcaagtcttgaacgttgaactgaatcagattatagaggcgtgc
aagtttctggatgagaagtggtccccaaagtttgcggtgattgttgcacagaagaatcac
catacaaaatttttccagtcgggatctcctgacaatgttcctcctggaactgttgttgac
aacaaagtctgtcatccaagaaactatgacttctacctttgtgcccatgctggaatgatt
ggtacttcaaggccaacacattaccacgttctatttgatgaaattggcttttcaagtgat
gagctgcaggaactagtgcactcactttcttatgtgtaccagagaagcactacagccatt
tctgtagttgctccaatttgctatgcccacttggcagcaagccaggtaggatcattcatg
aagtttgacgacttatcagagacatcttctagccagggtgggatgacatctgctggacct
gttcctgtcccccagctgcctagactgcaggagaaagtgtgcaattcaatgttcttctgt
tga
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