KEGG   Citrus x clementina (clementine): CICLE_v10014300mg
Entry
CICLE_v10014300mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K12825  splicing factor 3A subunit 1
Organism
cic  Citrus x clementina (clementine)
Pathway
cic03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cic00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CICLE_v10014300mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cic03041]
    CICLE_v10014300mg
Spliceosome [BR:cic03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    CICLE_v10014300mg
 Complex B
    CICLE_v10014300mg
 Complex C
   U2 SnRNP specific factors
    CICLE_v10014300mg
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin
Other DBs
NCBI-GeneID: 18053292
NCBI-ProteinID: XP_006445599
UniProt: V4VZ98
LinkDB
Position
Unknown
AA seq 811 aa
MPGVSPILTLPAPPSDGDLGPLPPSQVSEKYTQEKPSNEEQTNANAAPASVATHTRTIGI
IHPPPDIRNIVDKTAQFVAKNGPEFEKRIIANNANNAKFNFLTSSDPYHAYYQHRLSEFR
AQNQSSAQKPSSEPMDSAAPESEPSAVAADGSDAAAKTEPALPFKLPVQKVLEPPEAEQY
TVRLPEGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFTFFTQL
ADAYSKVLMPPKGLTEKLKNSVLDMTTVLERCLHRLEWERSQEQARQKAEDEIEQERMQM
AMIDWHDFVVVETIDFADDEDEDLPVPMSLEEVIRKSKMSSMEEDEIVEPGKEVEMEMDE
EEVQLVEEGMRAASLEENDVERKEMQANEDPEPPMRIVKNWKRPEERIPAERDPTKFVIS
PITGELIPISEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARLRPD
IFGTTEEEVSNAVKAEIEKKKDEQPKQVIWDGHTSSIGRTANQAMSQNINGDDQNSAANS
DSSNLPGPAAPPPRPGVPSLRPLPPPPGLALNLPRVPPNTVQYSTPTSGGIPVPQQRQFT
MQGIPSMPPNPPSMPIGGQPPVMMSRPPPMPPSISMNPSGVHVPPPPGSQFTHMQVPQHF
AHLPGPAPPPVTMMQPPPLPHGMPPPPPTEAPPPLPEEPEPKRQKLDDSMLIPEDQFLAQ
HPGPVRVTVAVPNVDEGNLKGQLLEITMQSLSETVGSLKEKISGEIQLPANKQKLSGKAG
FLKDNMSLAYYNVTTGETLTLSLRERGGRKR
NT seq 2436 nt   +upstreamnt  +downstreamnt
atgccaggagtgtcgccaatcttgactcttccagcacctccttccgatggagatcttggt
cctcttcctccatctcaggtgtcagaaaagtatacgcaggagaaaccatcaaacgaggag
cagaccaatgctaacgctgctcctgcatcggttgcaacccacacgagaacaattggaatt
attcatcctcctccagatatcagaaatattgttgacaaaactgctcagttcgtcgctaag
aatggaccagaatttgagaagaggatcattgcgaacaatgctaataatgccaagttcaat
tttttgactagttcagatccttatcatgcatattaccaacatcggctgtctgaatttcgt
gcgcagaatcaatcttctgcccagaaaccttcttcagagcccatggattctgctgcacct
gagtcagagccatctgcggtggctgctgatggtagtgatgcagctgcaaagactgagccg
gctcttccatttaaactacctgtacagaaggtccttgagccccctgaagccgagcagtat
accgtgcggcttcccgaagggattactggcgaagaacttgacattattaagctgactgcc
cagtttgtagctagaaatggaaaatcattcttgacaggattgactagtagagagataaac
aatcctcagttccactttctgaaaccaacgcatagtatgtttacttttttcactcaactt
gcagatgcatattctaaagtgttgatgccaccaaagggattgactgagaaattgaagaat
agcgttcttgacatgacaactgtgcttgaacggtgcttgcatcgcctggaatgggaacgt
tcacaagagcaggcgaggcaaaaagctgaggacgagattgagcaggagaggatgcaaatg
gctatgattgattggcatgattttgttgttgttgagacgatagactttgcagatgacgag
gatgaggacctacctgtgccaatgagtcttgaggaggttattaggaagagcaagatgtct
tctatggaagaagatgaaattgttgaacctggaaaggaggtagaaatggagatggatgaa
gaagaggtgcagcttgttgaagagggcatgagggcagctagtcttgaagaaaatgatgtc
gaaagaaaggagatgcaggctaatgaggatccagaaccaccaatgagaattgtaaagaac
tggaagagacctgaggagaggatccctgctgaaagagaccccacaaagtttgttatttcc
cccattactggtgagctaattcccattagtgaaatgtctgagcacatgagaatttccctc
attgatcccaagtacaaggagcaaaaagaaaggatgttcgctaagattcgggagacgact
cttgctcaggatgatgagatttccagaaatattgttgggcttgcacgtttacggcctgat
atctttggtaccacagaggaagaagtttctaatgcagtcaaagcagagattgagaagaag
aaagatgagcaaccaaagcaagtcatatgggatggtcatactagtagcattgggcgtaca
gcaaaccaagccatgtctcaaaatattaatggagatgatcaaaacagtgcagctaacagc
gattcctcgaatctacccggtccagcagctcctcctcctcgacctggtgtgccttctttg
cgtcctcttcccccaccaccgggactagccttgaatcttcctcgtgtgcctccaaacaca
gtccagtattcaacacccactagtggtgggatcccagttcctcaacagaggcagttcact
atgcaagggattccatcaatgcccccaaaccctccttcaatgcctataggtggacagcca
cctgttatgatgagtcgaccacccccaatgccaccatcgatttccatgaatccatctggt
gtgcatgtcccaccgcctcctggatctcagtttactcatatgcaagttccgcaacatttt
gcccatctcccgggccctgcaccacctcctgtgactatgatgcagccaccacctttgcct
catgggatgcctcctccacctccaactgaagctccgccgccacttccagaagagccggag
ccaaagaggcagaagcttgatgattctatgcttattcctgaagatcaatttctggcacag
catccgggacctgttcgcgtcaccgtggctgttcccaatgttgatgaaggaaatctgaaa
gggcaacttctggagattacaatgcagtccttatctgaaactgttggcagtttgaaagag
aaaatttctggggagattcaacttcctgcaaacaaacagaaattgagtggaaaagctggt
tttctgaaggataatatgtcacttgcatattataatgtcacaacaggggaaacactaact
ctttctttgagagagcggggtggtagaaagagataa

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