Citrus x clementina (clementine): CICLE_v100146051m
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Entry
CICLE_v100146051m CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cic03032
]
CICLE_v100146051m
03400 DNA repair and recombination proteins [BR:
cic03400
]
CICLE_v100146051m
Enzymes [BR:
cic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CICLE_v100146051m
DNA replication proteins [BR:
cic03032
]
Prokaryotic type
DNA Topoisomerases
CICLE_v100146051m
DNA repair and recombination proteins [BR:
cic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CICLE_v100146051m
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
Motif
Other DBs
NCBI-GeneID:
18051822
NCBI-ProteinID:
XP_006445692
UniProt:
V4TZ83
LinkDB
All DBs
Position
Unknown
AA seq
523 aa
AA seq
DB search
MNFSIFTNTSPMALSSTLRFSSSFFLFHNHCRHARFLSSPRRFLSFPPSRPPPSSRTPIL
ASKDEERNGNGSVATVGPNVSPRIVPVELHEEMTGSYITYSMSVLLGRALPDVRDGLKPV
HRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDNAVYDSLVRMAQDFSLRYPLIR
GHGNFGSIDADPAAAMRYTECRLEALSEAMLLADIDQDTVNFVPNFDESQKEPSLLPARL
PTLLLNGASGIAVGMATNIPPHNLGELVDVLCALIHNPEATLQELLEYMPGPDFPTGGLI
MGNLGILDAYRTGRGRITVRGKTEVELLDSKSKRMGVIIKETLDGISDIRDESDRSGMRI
VIELKRGADPSIVVNSLYRLTALQSSFSCNMVGILDGQPKQMGLKEVLQAFLDFRCSVVE
RRARFKLSQVKERRHIVEGIMVGLDNLDRVIRIVREAPSNSTASAALKDEFKLSEKQADA
ILDMNLRRLTMLERKKFVDESKTLMEQILKLEELLSSRKNILQ
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgaacttctcaattttcacaaacacttcgccaatggcgctctcttcgactctgcgcttc
tcttcctccttcttcctcttccacaaccactgccgtcacgctcgctttctatcttcgcct
cgccgtttcctatcctttcctccctctcgccctcctccttcttctcgcactcctattctt
gcctccaaggatgaggagagaaatggaaacggcagtgttgccacggtgggccccaatgtt
tcgcctcgcatagtgccggtggagctccatgaggaaatgactgggtcatatatcacttat
tctatgtctgttttgctgggacgcgctttgcctgatgttagagacggcttgaagccagtg
caccgtcggattctatttgcaatgcatgagttgggcctttcatcgagaaaacctttcaag
aaatgcgctagagttgttggggaggttctaggtaaatttcatccacacggagacaatgct
gtctacgattctttggttcgaatggctcaggatttctcgctaagatacccgctaatccga
gggcatgggaattttggttcaattgatgcagatcctgctgctgccatgcgttatacagag
tgcagattggaagcactttctgaagcaatgttgttggcagatattgatcaagataccgtt
aattttgttcctaactttgatgaatcacaaaaagaaccatcacttctgcctgctcgactc
ccaactttgctgctcaatggtgcctctgggattgcggttggcatggcaaccaacattcca
cctcataatcttggagagttggtagatgtgctctgtgcattaattcataatcctgaagcc
acactccaagagttgttggaatacatgcctggacctgattttccaactggaggacttatt
atgggaaatctcggtatcttggatgcatatcgaactggacgaggacgcattacagtcaga
ggaaaaactgaggttgaactacttgactctaagtcaaagagaatgggtgtcattataaaa
gagactttggacggaatcagtgatattagggatgagagtgatcgttctggaatgcgtata
gttattgagctaaaacggggagcagacccttcgatcgttgtaaatagtctttatcgtctt
actgctctacagtccagttttagctgcaacatggttggtatactcgatggacaacctaaa
cagatgggtttgaaagaagtacttcaggctttcttagactttagatgttctgttgttgaa
agacgtgcaaggttcaaactttcacaagtgaaggaaagaagacacattgtcgagggtatc
atggtcgggcttgataatttggatagagtgattcgcattgttagggaagctcctagcaat
tcaactgcatctgctgctctaaaggatgaattcaaactttctgagaaacaagctgatgct
attttggacatgaacttgagaagacttaccatgcttgagagaaagaagtttgttgatgag
agtaaaaccttgatggaacaaattctgaagctggaggaactattgtcaagtaggaaaaat
atattgcag
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