Citrus x clementina (clementine): CICLE_v10014624mg
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Entry
CICLE_v10014624mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cic03041
]
CICLE_v10014624mg
Enzymes [BR:
cic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CICLE_v10014624mg
Spliceosome [BR:
cic03041
]
Complex C
Other components
Complex C specific factors
CICLE_v10014624mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
HA2_C
AAA_22
DEAD
HA2_N
AAA_19
AAA_30
ResIII
AAA_7
Cas3-like_C_2
AAA_29
nSTAND3
T2SSE
AAA_11
AAA_23
SRP54
Motif
Other DBs
NCBI-GeneID:
18053342
NCBI-ProteinID:
XP_006449459
UniProt:
V4W8Z3
LinkDB
All DBs
Position
Unknown
AA seq
618 aa
AA seq
DB search
MSQFWKPGTEKPRLLDDEEGGVVFLSSSLSSASSIGYGYASIEKQRQRLPVYKYRTAILY
LVETHAATIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQAVASRVAEEMG
VKVGEEVGYTIRFEDFTNKDLTAIKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSIST
DILLGLLKKIQRRRSDLRLIISSATIEAKSMSAFFHARKGRRGLEGVELVPRLEPAILSV
EGRGFNVQIHYVEEPVSDYVQAAVSTVLLIHDKEPPGDILVFLTGQDDIDATIQLLTEEA
RTSKKNSSGLIILPLYSGLSRAEQEQVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDS
GFSKQRFYNPISDIENLVVAPISKASARQRAGRAGRVRPGKCYRLYTEEYFVKEMPAEGI
PEMQRSNLVSCVIQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKLTSPT
GFQVAEIPLEPMISKMILSSNELGCSEEIITISAVLSIQSIWVSGRGAQKELDEAKLRFA
AAEGDHVTFLNVYKGFLQSGKSSHWCHKNFINYHAMKKVIEIREQLRRIAQRIGIVMKSC
ESDMQVSCTKGSYCWVFC
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagttctggaaaccgggcaccgagaagcctcgcctcctcgacgatgaagaaggc
ggcgtcgttttcttgtcatcctctctctcctccgcttcgtccatcggatatggttatgcc
agtattgagaaacagaggcagagattgcccgtgtacaagtaccgtacagctatcctttat
ttggtggagactcatgctgctactattattgttggtgagactggtagcggcaaaaccact
cagattcctcagtacctcaaagaagcaggttgggcagatggtgggcgggttattgcatgc
acccagccaagacgactggctgtccaggcagttgcttcaagggtggctgaagagatggga
gtcaaggttggagaggaagtcggctatacaattcgatttgaagattttacaaataaagat
ctaactgcaataaaatttcttacggatggggtattactcagagaaatgatggatgatcct
cttttgacgaaatacagtgtcataatggtggatgaggctcacgaaaggtctatttcaacg
gacattttgctgggcctcctgaaaaagatccaacgacgtcggtctgatctgcgtcttatt
atctcatctgctacaatagaagcaaaatcaatgtctgcattctttcatgccagaaaaggc
cgtcgaggattggaaggagtagagttggtaccaagactggagcctgcaatcctttcagta
gagggtagaggatttaacgtacaaattcactatgttgaggagcctgtctcagattatgtt
caggcagctgtttcaacggttttgttaattcatgataaggaacccccgggagatatcctg
gtgtttcttaccggtcaagatgatattgatgccaccattcagttgcttactgaagaagca
cgaaccagtaaaaagaactcctcaggattgattattttacctctatactcgggactttct
cgagcagaacaggagcaagtgttttctcccactcctagagggaagaggaaagtggtgata
tcaacaaatattgcagagacatcattgaccttggagggaattgtttatgttgttgacagt
ggtttctcaaaacagcggttctacaatccgatctcagatattgaaaatctggtagtggct
ccaatatcaaaggcatctgctagacaaagagctggtagggctggaagagttcgaccaggg
aaatgttacaggctatacacagaagagtattttgtgaaagagatgcctgcggaggggatc
ccggagatgcagagatcaaaccttgtctcctgtgtaattcagttaaaagccttgggcata
gataatatcttaggctttgattggccagcatctccaccacctgaagcaatgatccgagca
cttgaagtactttattcacttggagtccttgacgatgatgcaaaacttacttcgcctact
gggtttcaagttgcagagattcctttggaaccaatgatctctaaaatgatcttgtcttcg
aatgaacttggatgttcagaggagattataaccatttctgcagttctctcaatccaatct
atttgggtttctgggaggggagcacaaaaggaactggatgaagccaagttgaggtttgct
gctgcagagggtgaccatgtgacattcctaaatgtttacaaaggttttcttcagtctggg
aaatcttcacattggtgtcataagaacttcataaactaccatgctatgaaaaaagtaatt
gaaattagagaacaactcagaagaattgcacaaagaattggcatagtgatgaaatcttgt
gagagtgacatgcaagtaagttgtacaaaaggcagttactgctgggttttttgctaa
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