Citrus x clementina (clementine): CICLE_v10014690mg
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Entry
CICLE_v10014690mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CICLE_v10014690mg
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cic01007
]
CICLE_v10014690mg
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cic03016
]
CICLE_v10014690mg
Enzymes [BR:
cic01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
CICLE_v10014690mg
Amino acid related enzymes [BR:
cic01007
]
Aminoacyl-tRNA synthetase
Class II (U)
CICLE_v10014690mg
Transfer RNA biogenesis [BR:
cic03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CICLE_v10014690mg
Prokaryotic type
CICLE_v10014690mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
Motif
Other DBs
NCBI-GeneID:
18052209
NCBI-ProteinID:
XP_006448919
UniProt:
V4W7L5
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MPTVSVGRDRLFAALGKSYTKEEFEDLCFCFGIELDDVTTEKAIIRKEKHLDEEGDENDE
EVIYKIEVPANRYDLLCLEGIAQALRVFNKQQEIPKYTLSDVSKDSMLQMHVKPETSSIR
PYVFCAVLRDISFDEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQGPFTYEALPP
SHINFVPLKQTRDFTADELMEFYKSDLKLKKYLHIIENSPLYPVLYDQNRTVLSLPPIIN
GAHSAITLKTKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYADGRSYV
YPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASADNQWNINVLVPPTR
SDVLHPCDVMEDVAIAYGYNNIPKRKPASVKPLALNEFSDLMRLEIAMNGFTEVLTWILC
SSKEISTMLNRQTDKSTAVVGNPRTSDFEVVRTTLMPGILKTIGHNKDHPKPIKIYEVGD
VVLLDEKKDVGASCRRRLAALYCGANSGFELIHCLVDRIMEVIGTPFVPVGDDTGYYIQR
SDEPEFLLGRQASITHKGKHVGTFGIVHPEVLNNFDISDPCSFMEIDIENFL
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgcctacagtgagcgtgggcagggatcgtctattcgccgccttagggaaatcctacaca
aaagaagagtttgaggatctgtgcttctgcttcggaatcgagctcgacgatgtgacaact
gaaaaagcgatcattagaaaagagaagcacttagatgaagaaggagacgaaaatgatgaa
gaagttatttacaaaattgaagttccagccaacagatatgatttgctttgcctcgaaggg
attgctcaagctcttcgtgttttcaacaagcagcaggagatacctaagtacacactctca
gatgtcagcaaagactccatgcttcaaatgcatgtgaagcctgagacatcttcaattcgt
ccatatgtcttttgtgctgttttaagagacatcagttttgatgaagctagttataacagc
ttcattgatcttcaagataagcttcatcagaacatttgccggcgaagaacccttgttgca
attggtactcatgacttggacacgttacaaggccctttcacgtatgaggctttgccacca
tcacatataaattttgtgccactgaagcagacaagggacttcacagccgatgagcttatg
gagttttacaaatcagatttgaaactgaaaaagtatttgcacataattgagaattctcct
ctgtaccctgtcttatatgatcagaataggactgttctgtcattaccaccaattattaat
ggggcccattctgcaatcaccctaaagacaaagaacgtgttcattgaatgtactgccact
gatttgacaaaggccaagattgttttaaacacaatggtaacaattttttctgagtattgc
aagagaaaataccaagtggaaccagttgaagtggtctatgctgatgggaggtcatatgtt
tatcctgatctgtcagcctacaatatggaagtttctttgtcatatattaatcatacaatt
ggagtctctttggaggcagaagaggttactagtttattgaacagaatgcaattgcatgca
gagcgatctgcatcagctgataatcaatggaatataaatgtacttgttcctccaacgaga
agtgatgttctgcacccatgtgatgttatggaggatgttgcaattgcttatgggtacaac
aacattcctaagagaaagcctgcatctgtgaaaccattggccttaaacgagtttagtgac
cttatgaggttggagattgcaatgaatggattcacggaggtcttgacatggattttatgc
tctagcaaagagatttcaaccatgcttaatcgtcaaactgacaaatcaactgctgtcgtt
ggaaatcctcgtacatctgattttgaggttgttagaacgaccttgatgcctggtattttg
aaaaccattggacacaacaaagaccatccaaagccaataaagatttatgaagtgggtgat
gtagtactgttggatgagaagaaggatgttggtgcatcatgccgtcgccgactagcagcc
ctttactgtggtgccaattctgggtttgagctgattcattgcctagtggacagaataatg
gaggtcatagggacaccttttgttccagttggtgatgatacagggtactacatacaacgt
tcagatgagcctgagtttcttttgggtagacaagccagcattactcacaaggggaagcat
gttggcacttttgggattgtgcaccctgaggttttgaacaatttcgacatttctgatcca
tgctccttcatggaaattgacattgagaattttttgtga
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