Citrus x clementina (clementine): CICLE_v10014820mg
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Entry
CICLE_v10014820mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CICLE_v10014820mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cic03021
]
CICLE_v10014820mg
03036 Chromosome and associated proteins [BR:
cic03036
]
CICLE_v10014820mg
Transcription machinery [BR:
cic03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
CICLE_v10014820mg
Chromosome and associated proteins [BR:
cic03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
CICLE_v10014820mg
PBAF complex
CICLE_v10014820mg
GBAF(ncBAF) complex
CICLE_v10014820mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
SWIB_eIF2D
YEATS
Motif
Other DBs
NCBI-GeneID:
18052611
NCBI-ProteinID:
XP_006447079
UniProt:
V4W2Z7
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MSANNNNPAKSLGQTSSPFANAGMGSPSMPMNPGFPQSQAQAQMGAGFPSQFQLSQAQAL
AQAHQSKMHAQVAQAQAAHAQLQAHLQAQGLSINQFQNAGIGNLGSSSPSNLTPGNASLK
RMPQKPPVRPPVVPMSNMVSPLKAMELTSAARRKKQKLPEKQLQERVAAILPESALYTQL
LEFEARVDAALTRKKVDIQEALKNPPCLQKTLRIYVFNTFANQIKTIPKKPNAEPPMWTL
KIIGRILEDGVDPDQPGMVQKSNPLYPKFSSFFKRVTISLDQRLYPDNHIIVWENSRSPA
PHEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSPPLMEVLGIEVDTRPRIIAAIWHYVKA
RKLQHPNDPSIFTCDPPLQKVFGEEKMKFTMVSQKISQHLSPPQPIHLEHKIKLSGNSPV
GTACYDVLVDVPFPIQRELSTLLANADKNKEIDQCDEAICSAIRKIHEHRRRRAFFLGFS
QSPVEFINTLIESQSKDLKLVAGEGSRSAEKERRSDFFNQPWVEDAVIRYLNRKPAAGSD
APGST
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgaacaacaataaccctgccaagagtcttgggcaaacttcgtcaccctttgct
aatgctggaatgggtagtccatctatgcccatgaaccctggttttccgcaatcacaagct
caggcgcaaatgggtgctgggtttccgagccagtttcagttatctcaagctcaggctcta
gcccaggcacatcagtcaaaaatgcatgctcaggtggcgcaagcccaagcagctcatgcc
cagctccaagctcatttacaagctcaagggctttccattaaccaattccagaatgctggt
attggaaacttaggttcatcttcaccttctaatttgactcctggtaatgcaagtctgaaa
aggatgcctcagaagccccctgttcgtccacctgtggttccaatgtcaaacatggtttcg
ccattaaaagcaatggaacttacgtctgctgcacgaaggaagaagcaaaaacttccagag
aaacagttacaagaaagagtggctgcaattttgcccgaatctgccttgtatacccagctc
cttgagtttgaggctcgtgttgatgctgccttgactagaaagaaagttgatatccaggag
gcacttaagaatcccccttgtttgcagaaaacccttcggatttatgttttcaatacattt
gctaatcagattaaaactattccgaagaagccgaatgccgagccacctatgtggacgctt
aagataattgggaggatcttggaagatggtgtagatccagaccagcctggaatggtacag
aagtctaatcccttgtacccgaagttctcatctttcttcaagagagttaccatttcccta
gaccagagactctaccctgataatcatatcattgtatgggagaattcccgatccccagca
cctcatgagggttttgaagtaaagagaaaaggagataaagagtttaccgtaaacattcgg
ttggaaatgaattatgtgcctgagaaatttaagctgtctcctcccttgatggaggttctt
ggtattgaggttgatacacggccgagaattatagcggcaatttggcattatgtgaaggct
agaaaattgcagcacccaaatgatccttccatctttacttgtgatccacctcttcaaaaa
gtatttggggaagaaaagatgaaattcactatggtttcacagaagatatcacaacattta
tctcctccacaacccatacatttggagcacaagatcaagctttcaggtaatagtccagtt
ggaacagcatgctatgatgtgttggttgatgtgccattcccaatacagagggaattgtct
actctattggccaatgctgataagaacaaagagattgatcagtgtgatgaagcaatatgc
tctgctataaggaagatccatgaacaccgaagaaggagagcgttctttctagggttcagt
caatctcctgtggaatttattaacacattgattgagtctcaaagcaaggatttgaagctt
gtggctggagaaggtagtcgaagtgctgagaaagagcgccgatcagatttcttcaaccaa
ccatgggttgaagatgctgtgattcgttatttgaaccgtaagccagctgccggaagtgat
gctcctggaagcacatag
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integrated database retrieval system
