Citrus x clementina (clementine): CICLE_v10014841mg
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Entry
CICLE_v10014841mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CICLE_v10014841mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cic03021
]
CICLE_v10014841mg
Transcription machinery [BR:
cic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
CICLE_v10014841mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
DZR
Motif
Other DBs
NCBI-GeneID:
18051045
NCBI-ProteinID:
XP_006449854
UniProt:
V4UFW2
LinkDB
All DBs
Position
Unknown
AA seq
538 aa
AA seq
DB search
MSFDLLLKPQCSGCGSQVDLYGSNCKHMTLCLTCGKTMAENKAKCFDCGAIVTRLIREYN
VRPSNSSDKNYFIGRFVSGLPSFSKKKNAENKWTLHKDGLQGRQVTDTLREKYKNKPWML
EDETGQAQYQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
KNRRKTADGYERWMMKAANNGAAAFGEVEKPDDKESAGTGGRGRSKKSGDEDEGNVSDRG
EEDEDEEAKRKNRLGLNKRGEDDDEEGPRGGDLDLDEDDVEKGDDWEHEEIFTDDDEAVG
NDPEEREDLAPEVPAPPEIKQDEEDEDEEEEGGLSKSGKELKKLLGRANGLNESDAEDDD
DEDDDMEDEVGFSPILAPKHKDTPKKEEPADNSPAKPAPSGSGRATPSTSKSAKGKRKSN
GDDARAPSGAPLKKVKTENETKSSARDENVSASKSSAPAKGASSSRTGSTSASGPVTAEE
IRAVLLQQAPVTTQDLVAKFKPRLRSTEDRTAFADILKRISKIQKTNGPSNYVVLREK
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgatctgctgttgaagccgcagtgtagcggatgtggatcgcaggtggatttg
tacggaagcaactgcaagcacatgactctgtgtttgacatgtggcaaaaccatggccgag
aacaaagccaaatgcttcgattgtggagcaatcgtcactcgcttgattcgagaatacaat
gtacggccaagtaatagcagcgacaagaactacttcattgggagatttgtgagtggatta
ccaagtttctcaaagaagaaaaatgccgagaacaagtggactcttcataaagatggatta
caaggacggcaagttactgatactttgcgggagaagtacaagaataagccttggatgttg
gaggatgaaacaggccaggctcagtaccagggtcatcttgaaggctctcaatcagcgact
tattacctgttagtgatgcattctaaggaatttgttgctattccagctggttcttggtat
aactttaacaaagttgcgcaatataagcaactcacgttggaggaagcagaagagaagatg
aagaacaggaggaagactgcagatggatatgaaagatggatgatgaaagctgcaaacaat
ggagctgctgcatttggtgaagtggaaaagccagatgacaaggaaagtgctgggactggt
gggaggggacgtagtaaaaaaagtggtgatgaggatgaaggtaatgtgtctgatagggga
gaggaagatgaggatgaggaagcaaaaaggaagaatagacttggactcaacaaaagaggt
gaggatgatgatgaagaaggccccaggggtggtgatcttgatttggacgaggatgatgtt
gagaaaggtgatgattgggagcatgaggagattttcactgatgatgatgaggctgttggt
aatgatcctgaggaacgggaagatttagctcctgaagttcctgctcctccagaaattaag
caggatgaagaggatgaggatgaagaggaggagggaggactgagcaaatctggaaaagaa
ttgaaaaagctgcttgggcgagctaatgggctgaatgaatcggatgcagaggacgatgac
gacgaagacgatgatatggaggatgaagtgggtttttctcccatattggctccaaagcat
aaggatacgcctaagaaggaggaacctgctgacaacagtcctgccaaaccagcaccttct
ggatctggccgcgcaactccatctacttctaaatcagcaaaggggaagagaaaatctaat
ggagatgatgcaagagcacctagtggtgcgcctttgaagaaggtcaaaacagaaaatgaa
acaaaatcttctgccagggatgaaaatgtgtcagcttcaaaaagcagtgcacctgcaaaa
ggtgcatcatcatcaagaacagggtcaacatcagcttctggtcctgtcaccgcagaagaa
attagggctgtattattgcagcaggcacctgtcaccacacaggatcttgttgctaagttt
aaaccgagacttagatcgaccgaggatcggacggctttcgctgatattctgaagagaatt
tcaaagatacagaagaccaatggaccaagcaattatgttgtgttgagagagaaatga
DBGET
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