KEGG   Citrus x clementina (clementine): CICLE_v10014954mg
Entry
CICLE_v10014954mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K11790  denticleless
Organism
cic  Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:cic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cic04121]
    CICLE_v10014954mg
Ubiquitin system [BR:cic04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     CICLE_v10014954mg
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WDR55 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_TEP1_C EIF3I Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_WDR11_1st Beta-prop_WDR90_POC16_2nd MIOS_WD40 Beta-prop_DCAF12 PEP5_VPS11_N Beta-prop_WDR75_2nd Beta-prop_HPS5 Beta-prop_IFT140_1st WD40_RFWD3 WDR90_beta-prop_4th WD_LRWD1 Beta-prop_Nup120_160 Nop
Other DBs
NCBI-GeneID: 18051057
NCBI-ProteinID: XP_006446577
UniProt: V4U1Q6
LinkDB
Position
Unknown
AA seq 512 aa
MATPKSESFFLNVRSRELNGFKARKRPYFGDVVTDFTEIGAVAVEHHGEETPPLAVSFCK
TSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHQENAEKARISDWVAHQNAIFDLCWIKED
TNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDL
RCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITSVLYLKDEVSIATASA
VNSIVKFWDTRNLKAQITQACPHAESSSAKETRLHGISSLSQDSNGVFLTASCMDHRIYL
YNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQADPIKLK
SHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLENSRCSSMRSPSSVRRRVMAIPSTECR
KLFMNGEPGWLAKGSDRSYNSDDVLNQINSSDPKNMPIIRTPEAQKKKIPSFDTKEAFEK
TPEASLNSPSSVLNPPSSVKRRTIRDYFLVTP
NT seq 1539 nt   +upstreamnt  +downstreamnt
atggcgaccccaaaatcagaatctttcttcctaaatgtcagatcaagagagctcaacggt
ttcaaagctcggaaaagaccgtattttggtgacgtggtaacggatttcacggaaatcgga
gccgtggccgtcgaacaccatggcgaggagacgccgccattggccgtttcattttgcaag
acaagtaaaaactcccatatatttgccgtgtcggacgaggatggttatgtgagcttgttt
gattcacgtagaaagcttccttcttttgcatgtcaccaggagaatgcagagaaagccaga
ataagtgactgggttgcacatcaaaatgctatttttgatttgtgctggatcaaggaggat
accaacattttaacagcttcaggggatcaaactataaagatatgggatgcagagaaaaag
aaatgtactggagcattgatggggcacacagggagtataaaatcattgtgttctcatcca
acaaattctgatattcttgtttctggttcaagagatgggtcctttgctatatgggacttg
agatgcaagtccagtcccaaaagtaattgtgcagaatcttttgtattctcatctgctgta
gtcaaaggagctcatcttttgtctcaatcaaaaagagttagccgcaggaaggctgcttcc
atgagcattacatcagttctttatctgaaagatgaagtgtccattgctaccgctagtgca
gtgaacagcattgtaaagttctgggataccaggaatcttaaggctcaaattactcaggct
tgccctcatgcagagtcatcatccgcaaaggaaacaagattacatggtatttctagcctg
tctcaggattctaatggggtgtttcttacagcttcatgcatggaccatagaatatacctg
tacaatgtacttcagcttgataaaggcccaatacaacatttttctggatgtcgaatagaa
tcattctatgtaaagtcggaaatttgtcctaatgcaagtcatatactcagtggctctagt
gatggaaatgcttatgtatggcaggtgaataaacctcaagcagatcctatcaagttgaaa
agccatgatggggaagttacagcagtaaattggtgtccaaatgaggctgggaagattgta
acttcttcagatgattacacagttcgattatggagccttgaaaacagtcgttgctcgagc
atgagatctccatcttccgtccgaaggagagtaatggcaattccaagtacagaatgcaga
aaactttttatgaacggagaaccaggatggttagcaaagggttctgatcgttcatataat
tcagacgatgtgctaaaccaaattaactcttccgatcctaaaaatatgcctatcattaga
actcccgaggcccagaagaaaaaaattccatcttttgatacaaaagaagcatttgaaaaa
acccctgaagcttccctgaatagtccctcttctgtgttgaaccctccttcctcagtgaaa
cgaagaaccatccgtgattactttctagttactccgtaa

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