Citrus x clementina (clementine): CICLE_v10014954mg
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Entry
CICLE_v10014954mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K11790
denticleless
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cic04121
]
CICLE_v10014954mg
Ubiquitin system [BR:
cic04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
CICLE_v10014954mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_TEP1_C
EIF3I
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_WDR11_1st
Beta-prop_WDR90_POC16_2nd
MIOS_WD40
Beta-prop_DCAF12
PEP5_VPS11_N
Beta-prop_WDR75_2nd
Beta-prop_HPS5
Beta-prop_IFT140_1st
WD40_RFWD3
WDR90_beta-prop_4th
WD_LRWD1
Beta-prop_Nup120_160
Nop
Motif
Other DBs
NCBI-GeneID:
18051057
NCBI-ProteinID:
XP_006446577
UniProt:
V4U1Q6
LinkDB
All DBs
Position
Unknown
AA seq
512 aa
AA seq
DB search
MATPKSESFFLNVRSRELNGFKARKRPYFGDVVTDFTEIGAVAVEHHGEETPPLAVSFCK
TSKNSHIFAVSDEDGYVSLFDSRRKLPSFACHQENAEKARISDWVAHQNAIFDLCWIKED
TNILTASGDQTIKIWDAEKKKCTGALMGHTGSIKSLCSHPTNSDILVSGSRDGSFAIWDL
RCKSSPKSNCAESFVFSSAVVKGAHLLSQSKRVSRRKAASMSITSVLYLKDEVSIATASA
VNSIVKFWDTRNLKAQITQACPHAESSSAKETRLHGISSLSQDSNGVFLTASCMDHRIYL
YNVLQLDKGPIQHFSGCRIESFYVKSEICPNASHILSGSSDGNAYVWQVNKPQADPIKLK
SHDGEVTAVNWCPNEAGKIVTSSDDYTVRLWSLENSRCSSMRSPSSVRRRVMAIPSTECR
KLFMNGEPGWLAKGSDRSYNSDDVLNQINSSDPKNMPIIRTPEAQKKKIPSFDTKEAFEK
TPEASLNSPSSVLNPPSSVKRRTIRDYFLVTP
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccccaaaatcagaatctttcttcctaaatgtcagatcaagagagctcaacggt
ttcaaagctcggaaaagaccgtattttggtgacgtggtaacggatttcacggaaatcgga
gccgtggccgtcgaacaccatggcgaggagacgccgccattggccgtttcattttgcaag
acaagtaaaaactcccatatatttgccgtgtcggacgaggatggttatgtgagcttgttt
gattcacgtagaaagcttccttcttttgcatgtcaccaggagaatgcagagaaagccaga
ataagtgactgggttgcacatcaaaatgctatttttgatttgtgctggatcaaggaggat
accaacattttaacagcttcaggggatcaaactataaagatatgggatgcagagaaaaag
aaatgtactggagcattgatggggcacacagggagtataaaatcattgtgttctcatcca
acaaattctgatattcttgtttctggttcaagagatgggtcctttgctatatgggacttg
agatgcaagtccagtcccaaaagtaattgtgcagaatcttttgtattctcatctgctgta
gtcaaaggagctcatcttttgtctcaatcaaaaagagttagccgcaggaaggctgcttcc
atgagcattacatcagttctttatctgaaagatgaagtgtccattgctaccgctagtgca
gtgaacagcattgtaaagttctgggataccaggaatcttaaggctcaaattactcaggct
tgccctcatgcagagtcatcatccgcaaaggaaacaagattacatggtatttctagcctg
tctcaggattctaatggggtgtttcttacagcttcatgcatggaccatagaatatacctg
tacaatgtacttcagcttgataaaggcccaatacaacatttttctggatgtcgaatagaa
tcattctatgtaaagtcggaaatttgtcctaatgcaagtcatatactcagtggctctagt
gatggaaatgcttatgtatggcaggtgaataaacctcaagcagatcctatcaagttgaaa
agccatgatggggaagttacagcagtaaattggtgtccaaatgaggctgggaagattgta
acttcttcagatgattacacagttcgattatggagccttgaaaacagtcgttgctcgagc
atgagatctccatcttccgtccgaaggagagtaatggcaattccaagtacagaatgcaga
aaactttttatgaacggagaaccaggatggttagcaaagggttctgatcgttcatataat
tcagacgatgtgctaaaccaaattaactcttccgatcctaaaaatatgcctatcattaga
actcccgaggcccagaagaaaaaaattccatcttttgatacaaaagaagcatttgaaaaa
acccctgaagcttccctgaatagtccctcttctgtgttgaaccctccttcctcagtgaaa
cgaagaaccatccgtgattactttctagttactccgtaa
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