Citrus x clementina (clementine): CICLE_v10014975mg
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Entry
CICLE_v10014975mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03013
Nucleocytoplasmic transport
cic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CICLE_v10014975mg
03015 mRNA surveillance pathway
CICLE_v10014975mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v10014975mg
Enzymes [BR:
cic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CICLE_v10014975mg
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
CICLE_v10014975mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
IgD1_Trs65
Motif
Other DBs
NCBI-GeneID:
18053021
NCBI-ProteinID:
XP_006445928
UniProt:
V4TFQ0
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
MADPTENPAAPATSEPLPSTEPKRSWGDVAEEEEEKEKEERKQQQQQQTANTSEDKSTAE
LDVEGLTIDESKKVNKFLDEAEDSSIKTVTTGDTPYTSATTFEDLNLSPELLKGLYVEMK
FQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPT
RELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSA
KKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFV
TRIVKDYNQLFVKKEELSLESVKQYKVYCPDELAKVMVIRDRIFELGEKMGQTIIFVRTK
NSASALHKALKDFGYEVTTIMGATIQEERDKIVKEFKDGLTQVLISTDVLARGFDQQQVN
LIVNYDPPVKHGKHLEPDCEVYLHRIGRAGRFGRKGVVFNLLMDGDDMIIMEKIERYFDI
KVTEVRNSDEDFKAALKAAGLL
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggccgacccaaccgaaaacccagcagcccctgccacgtcggagccgttgccatcaacg
gagccgaagcgatcgtggggcgacgtagcggaggaggaggaggagaaggagaaagaggag
cggaagcagcagcagcagcagcaaaccgctaacacatctgaggataaatcaacggcggaa
ctggacgtcgagggtttgactattgatgagagcaagaaagtcaacaagttccttgacgaa
gctgaagactctagcatcaaaaccgttacgactggtgatacaccttatacctccgcaact
acatttgaagatttgaatctctcaccagagctcctaaagggattatacgtggaaatgaaa
ttccagaagcctagcaagattcaagccatcagtttgcctatgatcttgactcctccctac
agaaatttgattgctcaggcacgtaatggttctggcaagacgacttgttttgtgcttggg
atgttgagccgtgttgatccaaacctcaaggctccacaagcactttgcatttgtcctacc
agagaattggcaattcagaatttggaggttcttcgtaagatggggaagcacacagggata
acttcagaatgtgctgtgccaacagacagcaccaattatgtgccaatatcaaaaaggcca
ccagttacagcacaagtagtgattggcactcctggtaccattaagaaatggatgtcagca
aagaaattgggtttcagtcgtttgaaaattcttgtgtatgatgaggccgatcacatgctt
gatgaggctggctttagagatgattctttgaggattatgaaggacattgaaagaagcagt
ggtcattgccaggttcttctattttcagccacattcaacgaaactgtcaagaattttgta
acaaggattgttaaagattataatcaactttttgtcaagaaagaagagttgtcattagaa
tcagtaaagcagtataaagtttactgtcctgacgaacttgccaaggttatggtaatcagg
gatagaatttttgaactgggagaaaaaatggggcagacaattatatttgtccgcacaaag
aatagtgcaagcgcgttgcataaagcacttaaagattttggttatgaagtcactacaatt
atgggtgctacaatccaggaagaacgagacaaaattgttaaagagtttaaagatggatta
acacaagttcttatatcaactgacgttcttgcccgaggttttgatcagcagcaggttaat
cttattgtaaattatgatcctccggtgaaacatggaaaacatttagagcctgattgtgaa
gtatacctgcatagaattggccgggcaggacgctttggccgcaaaggagttgtgtttaat
ttgttgatggatggtgatgatatgattatcatggaaaaaattgaacggtactttgacatc
aaagtaactgaggtccggaacagcgacgaggacttcaaggcagcacttaaggcagccggt
ttgctgtga
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