Citrus x clementina (clementine): CICLE_v10015083mg
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Entry
CICLE_v10015083mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
CICLE_v10015083mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cic04121
]
CICLE_v10015083mg
03036 Chromosome and associated proteins [BR:
cic03036
]
CICLE_v10015083mg
Enzymes [BR:
cic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
CICLE_v10015083mg
Ubiquitin system [BR:
cic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
CICLE_v10015083mg
Chromosome and associated proteins [BR:
cic03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
CICLE_v10015083mg
Noncanonical PRC1 (PRC1.1)
CICLE_v10015083mg
Noncanonical PRC1 (PRC1.3/1.5)
CICLE_v10015083mg
Noncanonical PRC1 (PRC1.6)
CICLE_v10015083mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-RING_4
zf-rbx1
zf-C3HC4_5
zf-Nse
zf-RING_10
zf-RING_11
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
18052840
NCBI-ProteinID:
XP_006447263
UniProt:
V4TJ77
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MPAQKRSLQESHHANNGEQLQGEEQQRQDSFQQSHAKQSRHERQQLELQQNEQQQLEEDQ
KDDEEVEGEGDEEDEENEDDSEGPSSDTSGEKPEFVFVELPEIRKDVQCPICLGIIKKTR
TVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALISALYPDIDKYEE
EELAFHEEERTRNKQIQASIAKIFQRQSEALVKRRTPGKDTVSPFMTRPQRNPRTAHLRR
RRNSRGTEHQGSEDNEDENDDNGGKDSSSNDERSAEVRPRRRKRRSGIRSSQPSSSAANS
DGGCIENDLEVGRESRGISPGLVWNPEMLAWGRGGTRSNTRHGSASGCNIKSSRSTRLNK
LVEYLRSLQENNDELDVRLMLVSADTQCAPSLQQPYLCCQPSLSVKQLCEYVSLQTPLQA
EEVEILMVKERLDAKGNQSTPIPTTDQLQILEGQETLAGLRVNHTSNTDHLILAYRQKQS
R
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcacagaagcggtcgttgcaagaaagtcatcacgccaacaacggtgaacagcta
caaggagaagaacaacaacggcaagactcttttcaacagagccacgccaagcaatctcga
catgaacgacaacagctagagcttcaacaaaatgaacagcagcagcttgaagaagatcag
aaagacgacgaagaagtggaaggtgaaggggatgaagaagatgaggaaaatgaagatgat
tctgagggaccttcatctgacacttcaggagaaaaacccgaatttgtttttgttgaactt
ccagaaattcgtaaggatgtacaatgtccaatttgtctagggattataaaaaaaacacga
actgtaatggaatgcctgcaccgcttttgcagggaatgcatagacaagtcaatgcgacta
gggaacaatgagtgtcctgcttgccgcacacactgtgccagtcgacgttctttgagagat
gacccaaactacgatgccctaatttctgctctatatccagacattgataaatatgaggaa
gaggaattggcttttcatgaagaagaaaggactcggaataagcagattcaagcatcaatt
gccaaaatatttcaacgacaatcagaagcactagttaagagacgcacacctggtaaagat
acagtgagcccatttatgacaagaccgcagcggaatcctcgtactgctcatttgagaagg
agaagaaacagccgtggcactgaacatcagggatctgaagacaatgaggatgaaaatgat
gataacggaggcaaagattcctcttctaatgatgaacgctcagcagaagtcaggccgaga
aggcgtaaaagaaggtcaggaattcggtcatcccagccttcttcatcggccgcaaactca
gatggcggatgcattgaaaatgatttagaagtgggtagagaaagcagaggaatttctcct
gggcttgtttggaacccagaaatgcttgcttggggcaggggtggtactaggagtaacaca
cggcatggcagtgctagtggctgcaatattaagagctcgcgcagcactcgcctaaataag
cttgtagaatatctccggagcttgcaggaaaataacgatgagttagatgttcgtctcatg
cttgtttctgcggatacccaatgtgcaccaagtttgcagcaaccttacctttgttgtcaa
cctagtttgtcagttaaacagctatgcgaatatgtctcgctccagacacctttgcaagct
gaagaagttgaaatattaatggtgaaagagcggcttgacgccaaaggcaaccagtccacg
ccaattcctacaacagatcagctgcaaattttggaaggtcaagaaactttggcagggctt
agagtcaatcacacttccaatacagatcatttgatactagcatataggcagaagcagagt
aggtag
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integrated database retrieval system
