Citrus x clementina (clementine): CICLE_v10015111mg
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Entry
CICLE_v10015111mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic00040
Pentose and glucuronate interconversions
cic01100
Metabolic pathways
Module
cic_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CICLE_v10015111mg
Enzymes [BR:
cic01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
CICLE_v10015111mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
End_N_terminal
NosD
DUF4675
Motif
Other DBs
NCBI-GeneID:
18051079
NCBI-ProteinID:
XP_006446532
UniProt:
V4U1L8
LinkDB
All DBs
Position
Unknown
AA seq
473 aa
AA seq
DB search
MAAACNNLTSLALTVLTAFLLGSSSFETCSARDQTKHSIQSSTAHEPSLQGRKLSKFTSY
AYSGAPEEMATSSAIFNVLSYGAKGDGRTDDTKAFEAAWAAACKIEGATMVVPSGSVFLV
GPISFSGPTCQPNILFQLDGKIIAPTNSGAWGSGILQWLEFSKLKGITLTGKGIIDGQGS
VWWHDAPSSYGTADDSASSELKGNMPGTKPTALRFYGSSGVTVTGITIQNSQQTHLKFDD
CTAVQVSDFTASSPGDSPNTDGIHLQNSQDVTIYSSTLACGDDCVSIQTGCSNIDVHNVN
CGPGHGISIGSLGKDNTKACVSKITVRDVTMHDTMTGVRIKTWQGGSGLVQQVTFSNIQV
NNVKSPIVIDQYYCEKSSCHNESSAVQVSNIAYVNIRGTYTEQPAHFACSDILPCTGISL
STVALKPVQSATQPFCWEAYGELKTATDPPINCLRRGMPPNAKSHPYSDSCQN
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcttgtaataatcttacgagccttgcattaacagttctcacggcattcctt
ctggggtcttctagttttgaaacatgcagcgctagagatcaaaccaagcattcgatacaa
agcagcacagctcacgagccatccctccagggacgcaaattgtcaaagttcacgagttat
gcttattccggagctccggaagaaatggcgacgagctctgctattttcaatgtgttgagc
tacggagccaaaggtgacggtcgcacggatgacacaaaggcatttgaagcagcatgggca
gcggcttgtaagatagagggagcaaccatggtggttccatctggttccgtattccttgtg
ggacccatttccttctcgggccctacctgtcaaccaaacattttatttcagttggatgga
aagatcatagctcctacaaattctggagcttggggatcaggtattttacagtggcttgag
ttctcgaagcttaaggggattacactgacaggtaagggcataatcgacggacaaggctcc
gtctggtggcatgacgcgccctcctcttatggtactgcagatgattcagcaagcagtgag
ctaaaaggaaatatgccggggaccaagccaacggcgctgaggttctatggtagcagtggc
gttacagttaccggcataacaattcaaaacagccagcaaactcacctcaaatttgacgac
tgcacagctgtacaggtttcagacttcactgcttcatctccgggtgacagccccaacacc
gatgggatccacctacagaactcgcaagacgtgaccatttacagcagtactcttgcttgt
ggtgatgattgtgtatcaatacaaactggatgttcaaacatagacgtacacaatgtgaac
tgtggtcctggacatggaataagcattggaagtctgggaaaagataacaccaaggcctgt
gtttcgaaaatcaccgtccgagatgtcacgatgcatgacacaatgacaggagtcagaata
aagacatggcagggtggctcaggcttagtgcagcaagtcacgttctcaaacattcaagtc
aacaacgtcaaatctcctattgtaattgaccaatactattgtgaaaagagctcatgccat
aatgaatcttcagctgtccaagtatcaaatatagcctacgtaaatataagaggaacctac
acagaacagcctgcgcactttgcctgcagtgatatcttgccatgcactggtatatctcta
agtacagtagcactaaaaccggtgcagtctgcaacgcaaccattctgttgggaggcatat
ggagagctgaaaactgctactgatcctccgattaattgtttgcggagaggcatgccacca
aatgctaaatctcacccttacagtgactcctgccaaaactag
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