Citrus x clementina (clementine): CICLE_v10015158mg
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Entry
CICLE_v10015158mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K03678
exosome complex component RRP45
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CICLE_v10015158mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v10015158mg
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
CICLE_v10015158mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
18053073
NCBI-ProteinID:
XP_006446171
UniProt:
V4UAY8
LinkDB
All DBs
Position
Unknown
AA seq
464 aa
AA seq
DB search
MDARLANTWRLTVNEKRFIETALNSGIRIDGRNPFEYRKLSIKFGREDGSSEVQLGQTHI
MGFVTSQLVQPYRDRPNEGTLSIFTEFSPMADPSFEPGRPSESAVELGRIVDRGLRESRA
VDTESLCVLAGKLVWAIRIDLHILDNGGNLVDAANIAALASLLTFRRPECSLGGEDGLEV
IVHPPEEREPLPLIIHHLPIAVTFGFFSSESLLVIDPTHHEEAVMMGKMTATLNANGDVC
AIQKPGGEGVLQSVIMQCLRLASRMASDITKKIKDAVETYNTERALRKIKRHPTSITLDG
SVNLKEKLNEPSGHNVVNELSRKHLEKPRLASEENASPGNNGEGESKSSNFGRSSRRDGA
TSNFVGGAASWDPYSRGVDSDFLKASLASRGTLTPKKKQQDPTGERKPNESKPEESPGDV
IPTTSAMDISETGVHKGGEKTLKDAVKPKHKRKKKASSATADAS
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgagattagcaaatacgtggaggttgactgtgaatgagaagagatttatagag
actgcgcttaattctggtatcagaattgatggtcgcaacccttttgaatatcgtaaacta
tccatcaagtttggcagggaagatggttcatcagaagttcagctaggtcagactcatata
atgggttttgtaaccagccaactggttcaaccttatcgggaccgacctaatgaagggaca
ttgtcaatctttactgaattctctccaatggctgatccttcatttgagccaggtcgccct
agtgaatctgctgtggagttgggacgaatagtagatcgtggtctaagagaaagcagggcg
gtggatacggaatcactttgtgttctagctgggaagttagtttgggctatacgtattgat
ctccacattctagacaatgggggaaatcttgttgatgctgccaatattgctgctttggct
tctctcctgacgtttaggaggcctgaatgctcactaggaggagaagatggtctcgaagtg
atagtacatccacccgaggagagagagccactgccgttgataatacatcatcttcctatt
gcagttacttttggatttttcagtagtgagagcttattggtgattgatccaactcaccac
gaagaagctgttatgatgggaaaaatgactgctacacttaatgcaaatggtgatgtttgt
gctattcagaaacctggaggggagggtgttctgcagagtgttatcatgcaatgtttacgg
cttgcatccaggatggctagcgacattacaaagaagataaaagatgctgttgaaacatac
aacacagaaagagcattacgtaagatcaagcgtcatcctacttccattactttggatggc
agtgttaatttgaaagaaaaactaaatgaaccatcaggccataatgttgtgaatgagttg
tcaaggaaacatttggagaagccaaggcttgcatctgaggaaaatgctagtccaggtaac
aatggtgaaggtgaatccaaatcatcaaattttggcagaagtagcaggagagatggtgcc
acttctaattttgttggtggtgctgcaagttgggatccttactcgaggggtgttgattca
gatttcctgaaagcttctctagcttcacgaggaacattaacaccaaagaagaaacagcaa
gacccaacaggtgaaagaaagcccaatgaatcaaagccagaggaatcacctggagatgtt
attccaacaacttctgcgatggacatttctgaaactggagtacataaagggggagagaaa
acattgaaagatgctgtgaagccaaagcacaagcggaaaaagaaggcatcctctgctaca
gctgatgcaagctag
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