Citrus x clementina (clementine): CICLE_v10015207mg
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Entry
CICLE_v10015207mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic00260
Glycine, serine and threonine metabolism
cic00400
Phenylalanine, tyrosine and tryptophan biosynthesis
cic01100
Metabolic pathways
cic01110
Biosynthesis of secondary metabolites
cic01230
Biosynthesis of amino acids
Module
cic_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CICLE_v10015207mg
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
CICLE_v10015207mg
Enzymes [BR:
cic01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
CICLE_v10015207mg
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-GeneID:
18052469
NCBI-ProteinID:
XP_006449075
UniProt:
V4UDS0
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MDIVCNNISFQLPHKLSITRTRFTYCSLQKYSTSSLIMRKPLIKSLLPKTDHDHREYRKL
NPGKFGRFGGKFVPETLITCLSLLEAEFNFVLQDTKFQEELSTALRDYVGRETPLYFAER
LTDHYRNEKGEGPEIYLKREDLNHVGAHKINNAIAQAMIAKRMGRKSVVAATGAGQHGVA
TAAACAKLSLDCTVFMGTADMEKQSSKVLLMKLLGAQVKAVDGSFKEASSEAIRNWVGNL
EKSYYLTGTVVGPHPCPIMVREFQSIIGKETRKQAMEKWGGKPDVLLACVGSGSNALGLF
HEFINDKDVRLIGVEAAGFGLDSGKHAATLAKGEVGVYHGAMSYLLQDEEGHILGTHSVG
VGLEYPGVGPEISFLKDTGRAEFYTATDQEAVQAYQRLCRLEGIFPALEASHALAFLEKL
CPTLPNGAKVVVNCSGGGDKDVDTVVNYRYNQ
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggatattgtttgcaacaacataagttttcagcttcctcacaaattatctattacacga
acgcgattcacatactgctctttacaaaagtactcgacctcgagtctcattatgagaaag
cctttgataaagagcttattacctaaaactgatcatgatcatcgtgagtaccggaaactc
aatccaggaaaatttgggagatttggaggaaagtttgtgcctgagacactaatcacttgt
ttgagcctacttgaagctgaattcaactttgttttgcaggatactaagtttcaggaggag
ctgtcgactgcattaagagactatgtaggacgggagacgcctctttattttgctgagagg
ctgacagatcattacaggaacgaaaagggagaagggccagagatttatctgaaaagagaa
gatctcaaccatgtgggtgcacacaagatcaacaacgccatagcacaggcaatgatagcc
aagcgcatgggccggaaaagtgttgtggcggccaccggtgctggacagcatggcgtcgct
acagctgctgcatgcgcaaaactgtctttggactgtactgtgttcatgggcaccgctgat
atggagaaacaatcctctaaagtgctcctaatgaagctactaggagctcaggttaaagct
gtggatggaagtttcaaagaagcaagctcagaggctatcagaaattgggtggggaactta
gaaaaaagctattatttaacgggtacggtggtggggcctcacccgtgtccgataatggta
cgagaatttcaatcaatcataggcaaagaaacgagaaaacaagcaatggaaaaatgggga
ggcaagcctgatgtattgctggcttgtgtgggcagtggatcaaatgcgttgggtttgttt
catgaattcataaacgataaagatgtgagattgattggagtggaggctgctggatttggc
ttggacagcggcaaacacgctgcaactctggctaaaggggaagtgggcgtttatcatgga
gccatgagctacttgttgcaagatgaagaaggccacatcttggggactcattctgtcggg
gtggggctagagtatccaggagttggcccggagataagctttcttaaggacactgggcgt
gcggagttctacactgcgactgaccaagaagctgtccaagcgtatcaacggctgtgcaga
ttagaaggcatatttccggcccttgaggcatctcatgcattggcatttctagagaaactt
tgccctactttacctaatggtgcaaaagttgttgtcaactgtagtggaggtggggataag
gacgtcgacacggtcgtcaattacagatacaatcaataa
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