Citrus x clementina (clementine): CICLE_v10015269mg
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Entry
CICLE_v10015269mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K09419
heat shock transcription factor, other eukaryote
Organism
cic
Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cic03000
]
CICLE_v10015269mg
Transcription factors [BR:
cic03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
CICLE_v10015269mg
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMF_TATA_bd
AFAP_C
HSF_DNA-bind
DUF5106
Peptidase_M16
APG6_N
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
18051825
NCBI-ProteinID:
XP_006445695
UniProt:
V4U4C8
LinkDB
All DBs
Position
Unknown
AA seq
440 aa
AA seq
DB search
MEQKGEMGKEFKSQVYHNLISKGFRKVDPDRWEFANEGFLRGQKHLLRSISRRKPAHGHG
HQQSHQQNAQSSSVGACVEVGKFGLEEEVERLKRDKNVLMQELVRLRQQQQATDSQLQTM
VQRLQGMEQRHQQMMAFLAKAVQSPGFLAQFVQQQNDSNKRIAEANKKRRIRQEGVAEDD
HATTADGQIVKYQPSMNEAAKSMLRKIIKMESSQLESFNNNHDNYLIGDGASSSNTGSTS
SRMSGVTLQEVPQTSGPYAPAASGILADGPSAAATERQSSSRSTASEKTTTDQFPDINLL
VAAQEATSLPISESDVIMPDLAQIPEIMPESMDGIPAESFIGSRMENGGYVDPTSLIVNG
SVPIEIDDISTDADIDALLESSGLWDIVHSPVPEDIESTSVDVKTVGNEMQAIENGWNKV
QSMDQLTEQMGLLNSETKEV
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggagcagaagggggaaatggggaaagaattcaaatctcaggtttatcataacctgatt
tcaaagggttttagaaaagttgatccggaccgctgggaattcgcaaatgagggcttttta
cgtggtcaaaagcacctgcttcggagtattagtaggagaaaacctgcgcacggacatggt
catcagcagtcacatcaacaaaatgcacaaagttcttccgtgggtgcttgtgttgaagtt
gggaaatttgggcttgaggaagaagtagagaggcttaagagggacaagaacgtgcttatg
caggaacttgttaggttgaggcagcagcagcaggctactgatagccagctgcaaaccatg
gttcaacgtcttcaggggatggagcagcggcaccagcaaatgatggcattcctggcaaaa
gctgtgcagagccctggtttcctagcccagtttgtacagcaacaaaatgatagcaataaa
cggatagctgaagccaacaaaaagcgtaggatcaggcaggaaggtgttgctgaagatgat
catgctactactgctgatggacagattgttaagtaccaaccttctatgaacgaggcagca
aaatcaatgcttaggaagattataaaaatggagagttctcagctagaatcttttaacaac
aatcatgataactacctgattggagatggtgcatcgtcatctaatactggaagcacttca
agccgtatgtcaggagtaactcttcaagaagtcccccaaacttcaggaccttatgcgcca
gcagcttctgggatattagcggatggtccatcagctgctgcaaccgaaaggcaatcctct
tcacgttccacagcttctgaaaagactacaacagatcagtttccagatattaatttgctg
gtagcggcacaagaagcaacctctcttcctatttcagagtctgacgtaatcatgcctgat
ctcgctcagattccagaaataatgcccgaaagtatggatggtattcctgcagaaagtttc
attggatccaggatggagaatggaggatatgttgatcccacttcattgatagtgaatggt
tcagtgcctatagaaattgatgacatttcaactgatgctgatattgatgctttgctagag
agttctggcttatgggatattgtacacagtccagttcccgaggacattgaatcaacctcg
gtggatgtcaaaactgtgggaaatgaaatgcaggcaatagagaacggatggaacaaagtc
cagagtatggatcagctcacggaacaaatgggtcttcttaactcggagacaaaagaggtc
tga
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