Citrus x clementina (clementine): CICLE_v10015328mg
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Entry
CICLE_v10015328mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K03265
peptide chain release factor subunit 1
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CICLE_v10015328mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v10015328mg
03012 Translation factors [BR:
cic03012
]
CICLE_v10015328mg
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
CICLE_v10015328mg
Translation factors [BR:
cic03012
]
Eukaryotic type
Release factors
CICLE_v10015328mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Motif
Other DBs
NCBI-GeneID:
18052253
NCBI-ProteinID:
XP_006445768
UniProt:
V4TF43
LinkDB
All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
MAQHSETDSNIEMWKMKKLIKTLSAVKGDGTSLISLVVNPRDKIPRVTKMLGEEYQNASK
IKKRMNRQSVQAAITYAQSRLKLYKNVPSNGLVLFTGTGVTEDEEEKKFVHDLVPFKPIN
SSLYVCDSRFHTETYGYIIIDGNGTLIGTLCGSSREVVLKFTVDLPKKHGRGGQSALRFS
RLRVEKRHNYLREAAELATKCFIDPATNQPNVTGLILAGSAEFKTELSQSGMFDPRLRAK
ILKVLDISYGGVSGFNQAIELSSDVIANVNVLKEKRVIGKFFEEIGQDTGKFVVGVDDTV
KALEMGAIHTLIVWEDLDINRYELKHSVTNGIVIKHLNKRQEADPSNFKDSAAAADLKVE
GKMGLLEWLVDHYKQFGCSLEIVTDKSQEGSQFCKGFGGIGGILRYQLDNGSFGEGSGDG
EAAANDSE
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggcacaacactcagagactgactcgaacattgagatgtggaaaatgaaaaaattgatc
aagactctcagcgctgtaaaaggagatggcaccagtctgatctctctggtcgtaaatcca
cgcgataagatacccagagtcaccaagatgctcggggaggaatatcagaatgcttcaaaa
attaagaagaggatgaatcgccaatccgtgcaggctgcaatcacttacgctcagtcaagg
ctcaagctttacaaaaatgttcccagcaatggacttgtcctgttcaccggaacgggtgta
accgaagatgaagaggaaaagaagtttgttcatgatcttgttccctttaaacccataaat
tcttctctgtacgtctgtgacagtaggttccacacagaaacttacggatacatcatcatc
gatgggaatggaacactcattgggacattgtgtggcagcagccgcgaggtggttctaaaa
tttacagttgatcttccgaagaagcatggaagaggcggtcaatcagccctcaggttctct
cggcttagagtagagaaacgccacaactacctcagggaagctgcagagctcgccaccaag
tgctttatagatcctgcaaccaaccagccaaatgttaccgggctaatactcgcaggatct
gctgaattcaaaacagagctgagccaatccggaatgtttgatccccgcctcagggctaaa
atactgaaagttttagacatttcgtatggtggggtaagcggcttcaatcaggccatagaa
ctctcatctgatgttatagccaatgtgaatgttctgaaagaaaagcgtgtgattggcaag
ttctttgaggaaattggccaggatacaggtaagtttgtcgttggtgtagatgatactgta
aaggctttagaaatgggggccattcacactcttattgtctgggaagatttggacataaat
cggtatgaattgaaacacagtgtgacgaatggcattgtcattaagcacttgaacaaaagg
caggaagctgaccccagcaatttcaaggattcggctgcagctgctgatctaaaagttgag
ggcaaaatgggactcttggagtggttggttgatcattacaagcagtttggctgctcgctt
gagattgtcacagacaaatcacaagaagggtcccaattctgtaagggatttggtggcatt
gggggaatacttcgataccaacttgacaatggatcttttggtgagggttccggtgatgga
gaagctgctgctaatgattccgagtaa
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