KEGG   Citrus x clementina (clementine): CICLE_v10015615mg
Entry
CICLE_v10015615mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K05757  actin related protein 2/3 complex, subunit 1A/1B
Organism
cic  Citrus x clementina (clementine)
Pathway
cic04144  Endocytosis
cic04517  IgSF CAM signaling
cic05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:cic00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    CICLE_v10015615mg
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    CICLE_v10015615mg
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    CICLE_v10015615mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cic04131]
    CICLE_v10015615mg
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cic04812]
    CICLE_v10015615mg
Membrane trafficking [BR:cic04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    CICLE_v10015615mg
Cytoskeleton proteins [BR:cic04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     CICLE_v10015615mg
SSDB
Motif
Pfam: Beta-prop_EML_2 Beta-prop_WDR5 Beta-prop_THOC3 WD40_WDHD1_1st WD40 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_RIG_2nd WDR55 Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st EIF3I Beta-prop_Aladin Tricorn_2nd WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_HPS5 Beta-prop_EML Beta-prop_WDR36-Utp21_2nd WDR90_beta-prop_4th Ge1_WD40 Beta-prop_NUP159_NUP214 RMC1_N B-prop_COPA_B_2nd WD40_MABP1-WDR62_2nd DUF1131 BNR_3
Other DBs
NCBI-GeneID: 18052429
NCBI-ProteinID: XP_006448016
UniProt: V4UG39
LinkDB
Position
Unknown
AA seq 326 aa
MAAIAVHQFAQCITCHAWSPDHAMVAFCPNNNEVHIYKLIQEKWEKLHVLQKHDQIVSGI
DWSVRSNRIVTVSHDRNSYVWNQEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK
TVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNVFLATTSTDGKCRVFSTFIKGVDI
KEKKEGTSSDTKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVDETGIWTFIKFLDERKTS
SSGPKYGSQFSEAFGKLYGQSKYGVGNDAVESSRTRGGTHVNCINCIVPLREAGSSRITR
FTTSGLDGKIVTWDLESQEDLLNYHL
NT seq 981 nt   +upstreamnt  +downstreamnt
atggcggcaatcgcagttcaccagtttgctcagtgcatcacttgccatgcctggagtccc
gatcacgcaatggttgcattttgtccaaataataacgaagttcacatttataaactgatt
caagaaaagtgggagaagcttcatgttcttcagaagcatgaccaaatcgtttctgggata
gactggagtgtcaggtcaaacagaattgtgactgtatctcacgatcggaattcgtatgtg
tggaaccaagaaggatcagagtgggtgccaactcttgttatccttaggctaaatcgggcg
gcactttgtgttcagtggagtcctaaagaaaacaagtttgctgttgggagtggtgctaaa
actgtttgtatttgctactatgagcaagaaaataactggtgggtcagcaaactcatcagg
aagagacatgattcatctgtgacaagtgttgcttggcatcctaacaatgtttttcttgct
accacttcaacagatggaaaatgcagggtcttttccacctttataaaaggtgttgatata
aaggaaaaaaaggaaggcacttcctcagacacaaaatttggagagcaaatccttcagctt
gatctctcattttcttgggcatttggtgtcaagtggtcacccagtggcaataccttagct
tatgtagatgaaacaggaatatggaccttcattaaattccttgacgaaaggaaaacatca
tcgtcaggtccaaagtatggatcacagttctctgaagcatttggaaaactgtatggtcaa
tcaaagtatggtgtgggcaatgatgctgttgaatcttcaagaacacgtggaggcactcac
gtaaactgcataaattgcattgtacctctcagggaggcagggagttcaaggataactcgt
ttcaccacttcaggattggatggaaaaatagttacatgggatctggagagccaagaagat
ttattgaactatcatctatga

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