Citrus x clementina (clementine): CICLE_v10016365mg
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Entry
CICLE_v10016365mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K12883
nuclear cap-binding protein subunit 2
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03013
Nucleocytoplasmic transport
cic03015
mRNA surveillance pathway
cic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CICLE_v10016365mg
09122 Translation
03013 Nucleocytoplasmic transport
CICLE_v10016365mg
03015 mRNA surveillance pathway
CICLE_v10016365mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cic03019
]
CICLE_v10016365mg
03041 Spliceosome [BR:
cic03041
]
CICLE_v10016365mg
Messenger RNA biogenesis [BR:
cic03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
CICLE_v10016365mg
Spliceosome [BR:
cic03041
]
Common components
Common spliceosomal components
Cap binding complex
CICLE_v10016365mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
DUF5721
Motif
Other DBs
NCBI-GeneID:
18053421
NCBI-ProteinID:
XP_006447223
UniProt:
V4TJ42
LinkDB
All DBs
Position
Unknown
AA seq
253 aa
AA seq
DB search
MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI
KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG
RGRSGGQVRDEYRTDYDPGRGGYGKLVQRELEAQRQLVDYGTGSLNSFQPVMQPRYGRHG
GGHGHGGSHRHGRDYQRKRHREDDRHAHETSKRSADFESRRNSDHDSRPEKNPRFRESGD
SDDDEDDDRKQRS
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggcttctctattcaaggatcaaaggaagctttcagcttatcgtgacagaaggtttccg
gggactcaagaagaattcgaggaagcgttgctagcttcaactactgtttacgtcgggaac
atgtcgttttacacgacggaagagcaaatttatgagcttttttcacgagctggggaaatt
aagaaaatcatcatgggtttggacaagaactccaaaacgccctgtggcttctgttttgcc
ttattctactctagagaagataccgaagatgctgtcaaatatataagtgggacgattctt
gatgatcgtcctattagagttgattttgattggggttttcaggatggaaggcaatggggt
cgtggtcgaagtggtgggcaggtgcgggatgaataccgaacagattatgatcctggcaga
ggtggttatggaaaattagttcagagagagttagaagcacaaagacagcttgtagattat
ggtactggttcattgaactctttccagccggttatgcaacctcgttatggtagacatggt
ggaggccacggacatgggggctctcatcggcatggcagagattatcaacggaagcgacat
cgggaagatgatcgtcatgcacatgagacgtcaaagagaagtgcagattttgaatctagg
agaaattctgatcatgactcaagaccggagaagaatccacgtttccgtgaaagtggtgac
tctgatgatgatgaggatgatgatagaaagcaaagatcttag
DBGET
integrated database retrieval system