KEGG   Citrus x clementina (clementine): CICLE_v10016365mg
Entry
CICLE_v10016365mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K12883  nuclear cap-binding protein subunit 2
Organism
cic  Citrus x clementina (clementine)
Pathway
cic03013  Nucleocytoplasmic transport
cic03015  mRNA surveillance pathway
cic03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cic00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CICLE_v10016365mg
  09122 Translation
   03013 Nucleocytoplasmic transport
    CICLE_v10016365mg
   03015 mRNA surveillance pathway
    CICLE_v10016365mg
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cic03019]
    CICLE_v10016365mg
   03041 Spliceosome [BR:cic03041]
    CICLE_v10016365mg
Messenger RNA biogenesis [BR:cic03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     CICLE_v10016365mg
Spliceosome [BR:cic03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    CICLE_v10016365mg
SSDB
Motif
Pfam: RRM_1 DUF5721
Other DBs
NCBI-GeneID: 18053421
NCBI-ProteinID: XP_006447223
UniProt: V4TJ42
LinkDB
Position
Unknown
AA seq 253 aa
MASLFKDQRKLSAYRDRRFPGTQEEFEEALLASTTVYVGNMSFYTTEEQIYELFSRAGEI
KKIIMGLDKNSKTPCGFCFALFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG
RGRSGGQVRDEYRTDYDPGRGGYGKLVQRELEAQRQLVDYGTGSLNSFQPVMQPRYGRHG
GGHGHGGSHRHGRDYQRKRHREDDRHAHETSKRSADFESRRNSDHDSRPEKNPRFRESGD
SDDDEDDDRKQRS
NT seq 762 nt   +upstreamnt  +downstreamnt
atggcttctctattcaaggatcaaaggaagctttcagcttatcgtgacagaaggtttccg
gggactcaagaagaattcgaggaagcgttgctagcttcaactactgtttacgtcgggaac
atgtcgttttacacgacggaagagcaaatttatgagcttttttcacgagctggggaaatt
aagaaaatcatcatgggtttggacaagaactccaaaacgccctgtggcttctgttttgcc
ttattctactctagagaagataccgaagatgctgtcaaatatataagtgggacgattctt
gatgatcgtcctattagagttgattttgattggggttttcaggatggaaggcaatggggt
cgtggtcgaagtggtgggcaggtgcgggatgaataccgaacagattatgatcctggcaga
ggtggttatggaaaattagttcagagagagttagaagcacaaagacagcttgtagattat
ggtactggttcattgaactctttccagccggttatgcaacctcgttatggtagacatggt
ggaggccacggacatgggggctctcatcggcatggcagagattatcaacggaagcgacat
cgggaagatgatcgtcatgcacatgagacgtcaaagagaagtgcagattttgaatctagg
agaaattctgatcatgactcaagaccggagaagaatccacgtttccgtgaaagtggtgac
tctgatgatgatgaggatgatgatagaaagcaaagatcttag

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